EWM25513.1, cds5161 (CDS) Nannochloropsis gaditana

Overview
NameEWM25513.1
Unique Namecds5161
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:323876..324475 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25513.1
Productdienelactone hydrolase family protein
Orig transcript idgnl|cribi|Naga_100032g26.256.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:323876..324475 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR002925Dienelactn_hydro
Homology
BLAST of EWM25513.1 vs. NCBI_GenBank
Match: gi|585107279|gb|EWM25513.1| (dienelactone hydrolase family protein [Nannochloropsis gaditana])

HSP 1 Score: 409.068 bits (1050), Expect = 1.739e-144
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
Query:    1 MYVPDIFGKTPQAFQVCDKLAAAGFWVAFPDVFRGKAWPLEKFPPPDRQELMEWIGGYPFEGRVKPDIACALALLRENGVERFGIVGFCWGGKMSTLSSQDAEVFRATASAHPSFVTVEDAALVNCPILLLPSKDEADLTPFIDAVKARGVEASQEKFDDMHHGWVAARGDWKDPKQQARATEAIQLFVSFFTKHLKGE 199
            MYVPDIFGKTPQAFQVCDKLAAAGFWVAFPDVFRGKAWPLEKFPPPDRQELMEWIGGYPFEGRVKPDIACALALLRENGVERFGIVGFCWGGKMSTLSSQDAEVFRATASAHPSFVTVEDAALVNCPILLLPSKDEADLTPFIDAVKARGVEASQEKFDDMHHGWVAARGDWKDPKQQARATEAIQLFVSFFTKHLKGE
Sbjct:    1 MYVPDIFGKTPQAFQVCDKLAAAGFWVAFPDVFRGKAWPLEKFPPPDRQELMEWIGGYPFEGRVKPDIACALALLRENGVERFGIVGFCWGGKMSTLSSQDAEVFRATASAHPSFVTVEDAALVNCPILLLPSKDEADLTPFIDAVKARGVEASQEKFDDMHHGWVAARGDWKDPKQQARATEAIQLFVSFFTKHLKGE 199          
BLAST of EWM25513.1 vs. NCBI_GenBank
Match: gi|873239689|emb|CEL94094.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 184.111 bits (466), Expect = 4.318e-55
Identity = 97/195 (49.74%), Postives = 124/195 (63.59%), Query Frame = 0
Query:    5 DIFGKTPQAFQVCDKLAAAGFWVAFPDVFRGKAWPLEKFPPPDRQELMEWIGGYPFEGRVKPDIACALALLRENGVERFGIVGFCWGGKMSTLSSQDAEVFRATASAHPSFVTVEDAALVNCPILLLPSKDEAD---LTPFIDAVKARGVEASQEKFDDMHHGWVAARGDWKDPKQQARATEAIQLFVSFFTKHL 196
            DIFG      +VCD+LA AG  VA PD FRGK WP EKFPPPDR E M WIG +P+E ++  +    ++LL+  GVE+ G VGFCWGGKM    + D ++  A A+AHPSF T E    V CP+  LPSKDEAD   L   + A    G +   ++FDDMHHGWV+AR ++   + + RA EAI +F+ FF KHL
Sbjct:   45 DIFGDHNNTRRVCDRLADAGMLVAMPDYFRGKPWPAEKFPPPDRDEFMAWIGTFPWE-QINKETQPVVSLLKARGVEKIGCVGFCWGGKMIAHMAADPQI-SAVATAHPSFWTHELLQGVKCPMCALPSKDEADDETLGKSVLAAGPCGKDLVWQRFDDMHHGWVSAR-EYNTEENRKRAAEAISIFIDFFKKHL 236          
BLAST of EWM25513.1 vs. NCBI_GenBank
Match: gi|1183367212|gb|ORX93391.1| (alpha/beta-hydrolase [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 170.629 bits (431), Expect = 9.359e-50
Identity = 91/199 (45.73%), Postives = 113/199 (56.78%), Query Frame = 0
Query:    1 MYVPDIFGKTPQAFQVCDKLAAA-GFWVAFPDVFRGKAWPLEKFPPPDRQELMEWIGGYPFEGRVKPDIACALALLRENGVERFGIVGFCWGGKMSTLSSQDAEVFRATASAHPSFVTVEDAALVNCPILLLPSKDEADLTPFIDAVKAR--GVEASQEKFDDMHHGWVAARGDWKDPKQQARATEAIQLFVSFFTKHL 196
            + + DIFG  P   Q CD L     F VA PD FRGK W   +  P DR  LM+WI         KPD+      L  +G   FG+VGFCWG KM  L+++D   F A +  HPS +  EDA L   PILL+PSKDE DLT F++ +K +  G + S   FDDMHHG+ AARGD+ DP    R TEAIQL   FF  ++
Sbjct:   44 VVIYDIFGFHPNTKQFCDILGEKFNFRVALPDFFRGKPWDHTRMTPEDRPALMQWITSVGSWDNTKPDLEKVKKHLSSSGSTDFGVVGFCWGAKMGVLATRDGS-FSAASLIHPSLLADEDAELAEAPILLIPSKDEPDLTKFVEILKKKSFGSKCSYHLFDDMHHGFAAARGDYNDPANVKRTTEAIQLTGDFFQNNV 241          
BLAST of EWM25513.1 vs. NCBI_GenBank
Match: gi|470455275|ref|XP_004340932.1| (dienelactone hydrolase family protein [Acanthamoeba castellanii str. Neff] >gi|440797798|gb|ELR18873.1| dienelactone hydrolase family protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 161.77 bits (408), Expect = 2.481e-46
Identity = 81/199 (40.70%), Postives = 117/199 (58.79%), Query Frame = 0
Query:    3 VPDIFGKTPQAFQVCDKLAAAGF-WVAFPDVFRGKAWPLEKFPPPDRQELMEWIGGYPFEGRVKPDIACALALLRENGVERFGIVGFCWGGKMSTLSSQDAEVFRATASAHPSFVTVEDAALVNCPILLLPSKDEADLTPFIDAVK----ARGVEASQEKFDDMHHGWVAARGDWKDPKQQARATEAIQLFVSFFTKHL 196
            + DIFG      Q CD +A+A    V  PD FRG  W  EK    DR EL++WIG      +++P +A   A  ++ G ++  + GFCWG KM+  ++QD   + A A  HPSF T +DA  +  PI+ LP+KDE D+ P+++A+K    A   ++  ++FDD+HHG+ AARGDW D  Q  RA EAI+L  +F+ K  
Sbjct:   46 IYDIFGFHNNTKQFCDLVASATHARVLLPDFFRGAPWTAEKLETHDRSELLKWIGTEGSWEKIQPSLAATTAFAQKEGAQKIALFGFCWGAKMAWHAAQDGSTYAAAAFIHPSFFTPDDAKFLQVPIINLPTKDEPDMVPYMEALKEASPALHEKSEHKRFDDVHHGFCAARGDWSDELQAQRANEAIKLVANFYKKQF 244          
BLAST of EWM25513.1 vs. NCBI_GenBank
Match: gi|1061472605|gb|ODM91251.1| (putative AIM2 family protein C30D10.14 [Orchesella cincta])

HSP 1 Score: 160.999 bits (406), Expect = 6.085e-46
Identity = 87/197 (44.16%), Postives = 112/197 (56.85%), Query Frame = 0
Query:    5 DIFGKTPQAFQVCDKLAAAG-FWVAFPDVFRGKAWPLEKFPPPDRQELMEWIGGY-PFEGRVKPDIACALALLRENGVERFGIVGFCWGGKMSTLSSQDAEVFRATASAHPSFVTVEDAALVNCPILLLPSKDEADLTPFIDAVKARGVE--ASQEKFDDMHHGWVAARGDWKDPKQQARATEAIQLFVSFFTKHLK 197
            DIFG  P   Q  D+L + G F VA PD FRGK + L+ FPP D  E+M ++     ++  VK D+   +   ++ G   FGI GFCWGGKMS     + +  +A A  HP+FV   DA     P+L  PSKDE D+ P  + VK R  E  A   +FDDM HG+ AARGDWK   Q+ RA +AI L  +FF KHL 
Sbjct:   49 DIFGYHPNTKQFADQLNSCGIFRVAMPDFFRGKPFSLDNFPPKDPSEIMNFVSTTGSWDDVVKKDLQNVIEHYKKEGAVSFGIFGFCWGGKMSIKGVSEVDDIKAAALLHPAFVDTSDAEAAKGPVLFCPSKDEPDMLPLYEIVKKRLGEENAEHHRFDDMFHGFAAARGDWKVEDQRKRADQAIALVHNFFKKHLN 245          
BLAST of EWM25513.1 vs. NCBI_GenBank
Match: gi|298708789|emb|CBJ30749.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 160.229 bits (404), Expect = 1.066e-45
Identity = 88/204 (43.14%), Postives = 122/204 (59.80%), Query Frame = 0
Query:    1 MYVPDIFGKTPQAFQVCDKLAAAGFWVAFPDVFRGKAWPLEKFPPPDRQELMEWIGGY-PFEGRVKPDIACALALLREN-GVERFGIVGFCWGGKMSTLSSQ---DAE-VFRATASAHPSFVTVEDAALVNCPILLLPSKDEADLTPFIDAVKAR--GVEASQEKFDDMHHGWVAARGDWKDPKQQARATEAIQLFVSFFTKHL 196
            + V DIFG +PQ  QVCD  AAAGF VA PD  +G  WPLE FPP DR EL  W G    +E  ++P    A+A ++E+ G E  G+ GFCWGG ++  ++    DAE   +A  + HP+ ++ E A  V  P+L++PS ++ D  P  + +  +  G +    +FDDMHHG+ AARGDW +  Q  RA EAI  FV F+T +L
Sbjct:   42 VVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKFYTANL 245          
BLAST of EWM25513.1 vs. NCBI_GenBank
Match: gi|1026963687|ref|XP_016610184.1| (hypothetical protein SPPG_02638 [Spizellomyces punctatus DAOM BR117] >gi|907096616|gb|KND02145.1| hypothetical protein SPPG_02638 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 159.073 bits (401), Expect = 6.657e-45
Identity = 86/201 (42.79%), Postives = 117/201 (58.21%), Query Frame = 0
Query:    1 MYVPDIFGKTPQAFQVCDKLAAAGFWVAFPDVFRGKAWPLEKFPPPDRQELMEWIGGYPFEGRVKPDIACALALLRENGVERFGIVGFCWGGKMSTLSSQDAEVFRATASAHPSFVTVEDAALVNCPILLLPSKDEADLTPFIDAVKARGV--EASQEKFDDMHHGWVAARGDWKDPKQQARATEAIQLFVSFFTKHLKGE 199
            + + DIFG  P   Q  D+LAA GF+VA PD +RG  WPLEK  P    ELM  +  +  E R+  DI      LR NG E  G +GFCWG   +  ++ +  V  A+A+AHPS +TVE    V  P+ LLPSKDE DL P ++A+K +    +    +FDDMHHGW AAR D+ +P    R+ EA+Q+   FF + L+ +
Sbjct:   68 ILIYDIFGFHPNTHQFADELAAKGFFVAEPDFYRGNPWPLEKV-PIQLPELMAHLEQHVPESRMLADIGSVCRYLRSNGAESIGTLGFCWGAIYAIRANVEGLV-DASAAAHPSRLTVEIVKDVKGPLALLPSKDEPDLIPLMEALKEKPFVDKNVHVRFDDMHHGWCAARSDYSNPANARRSREALQIMARFFDETLQAK 266          
BLAST of EWM25513.1 vs. NCBI_GenBank
Match: gi|1183473701|gb|ORY97566.1| (Alpha/Beta hydrolase protein [Syncephalastrum racemosum])

HSP 1 Score: 152.525 bits (384), Expect = 1.158e-42
Identity = 83/195 (42.56%), Postives = 106/195 (54.36%), Query Frame = 0
Query:    5 DIFGKTPQAFQVCDKLAA-AGFWVAFPDVFRGKAWPLEKFPPPDRQELMEWIGGYPFEGRVKPDIACALALLRENGVERFGIVGFCWGGKMSTLSSQDAEVFRATASAHPSFVTVEDAALVNCPILLLPSKDEADLTPF--IDAVKARGVEASQEKFDDMHHGWVAARGDWKDPKQQARATEAIQLFVSFFTKHL 196
            DIFG      Q CD LA   G+ V  PD FRG+ W   K  P D   LMEW+G       V P +      ++  GV + GIVGFCWG K++  ++     F + +  HPSFV  +DA     PIL +PSKDE D+T +  + A K  G      +FDDMHHG+ AARGDW D   + RATEA+QL  +FF   L
Sbjct:   49 DIFGFHVNTKQFCDVLANRCGYRVVMPDFFRGEPWSPAKMTPADMPSLMEWVGKVGTIDVVLPQLQAVRDWIKPQGVNQAGIVGFCWGAKIAVQATAKDSFFGSASLIHPSFVDTKDAEEAGAPILAIPSKDEPDMTEYMAVLAKKPFGNLCEHHRFDDMHHGFAAARGDWNDEVNKKRATEAVQLTANFFKATL 243          
BLAST of EWM25513.1 vs. NCBI_GenBank
Match: gi|1183427258|gb|ORY51556.1| (alpha/beta-hydrolase [Rhizoclosmatium globosum])

HSP 1 Score: 150.984 bits (380), Expect = 4.216e-42
Identity = 79/197 (40.10%), Postives = 113/197 (57.36%), Query Frame = 0
Query:    5 DIFGKTPQAFQVCDKLAAAGFWVAFPDVFRGKAWPLEKFPPPDR-QELMEWIGGYPFEGRVKPDIACALALLRENGVERFGIVGFCWGGKMSTLSSQDAEVFRATASAHPSFVTVEDAALVNCPILLLPSKDEADLT--PFIDAVKARGVEASQEKFDDMHHGWVAARGDWKDPKQQARATEAIQLFVSFFTKHLKG 198
            DIFG  P   QVCD L+  GF VA PD+ RG  WP   +PPP+   E+++ I  +     ++ ++      LR  G   FG++G+CWGG M  L SQD  V+ A A  HP+   +E+AA V+CP+L+LP++D+A  T     D V  +   + Q +FDD+HHG+ AAR D+ D     RA EAI+    FF  ++K 
Sbjct:   51 DIFGDHPCTRQVCDILSTQGFRVAMPDLCRGDPWPANIWPPPNGFPEVLQHIQKHASFPEIQKNMKATQEFLRSEGSSHFGLIGYCWGGYMVALLSQD-PVYEAGAIVHPAAFPLEEAAKVSCPLLILPARDDAKETFDAIFDVVVKKNPASKQRRFDDVHHGFCAARADFSDALNAQRANEAIEEMSHFFKANIKA 246          
BLAST of EWM25513.1 vs. NCBI_GenBank
Match: gi|1061481784|gb|ODM99109.1| (putative AIM2 family protein C30D10.14 [Orchesella cincta])

HSP 1 Score: 150.599 bits (379), Expect = 5.316e-42
Identity = 79/195 (40.51%), Postives = 104/195 (53.33%), Query Frame = 0
Query:    5 DIFGKTPQAFQVCDKLAAAG-FWVAFPDVFRGKAWPLEKFPPPDRQELMEWIGGYPFEGRVKPDIACALALLRENGVERFGIVGFCWGGKMSTLSSQDAEVFRATASAHPSFVTVEDAALVNCPILLLPSKDEADLTPFIDAVKARGVE--ASQEKFDDMHHGWVAARGDWKDPKQQARATEAIQLFVSFFTKHL 196
            DIFG  P   Q  DKL + G F V  PD FRG+   +E FPP D  E+ +++         K D+   +   ++ GV  FG+ GFCWGGKMS  +S + +   A+   HPS V   DA    CP+L +P+KDE D+ P  + VK    E   +  + DD+ HG+  ARGDW D  Q  R  E I L  SFF KHL
Sbjct:   48 DIFGFHPNTKQFADKLNSCGMFRVVMPDFFRGEGLSMENFPPKDFSEIKKFVATKGSWEIAKRDMLNVIEHYKKEGVTNFGVFGFCWGGKMSIRASCEIDDVNASVLIHPSMVDNADAEGAKCPVLFIPTKDEPDMIPLYEIVKKNLGEDKTAHHRLDDVFHGFAGARGDWTDELQNQRVNETISLTHSFFKKHL 242          
The following BLAST results are available for this feature:
BLAST of EWM25513.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107279|gb|EWM25513.1|1.739e-144100.00dienelactone hydrolase family protein [Nannochloro... [more]
gi|873239689|emb|CEL94094.1|4.318e-5549.74unnamed protein product [Vitrella brassicaformis C... [more]
gi|1183367212|gb|ORX93391.1|9.359e-5045.73alpha/beta-hydrolase [Basidiobolus meristosporus C... [more]
gi|470455275|ref|XP_004340932.1|2.481e-4640.70dienelactone hydrolase family protein [Acanthamoeb... [more]
gi|1061472605|gb|ODM91251.1|6.085e-4644.16putative AIM2 family protein C30D10.14 [Orchesella... [more]
gi|298708789|emb|CBJ30749.1|1.066e-4543.14conserved unknown protein [Ectocarpus siliculosus][more]
gi|1026963687|ref|XP_016610184.1|6.657e-4542.79hypothetical protein SPPG_02638 [Spizellomyces pun... [more]
gi|1183473701|gb|ORY97566.1|1.158e-4242.56Alpha/Beta hydrolase protein [Syncephalastrum race... [more]
gi|1183427258|gb|ORY51556.1|4.216e-4240.10alpha/beta-hydrolase [Rhizoclosmatium globosum][more]
gi|1061481784|gb|ODM99109.1|5.316e-4240.51putative AIM2 family protein C30D10.14 [Orchesella... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5173rna5173Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications