EWM25533.1, cds5154 (CDS) Nannochloropsis gaditana

Overview
NameEWM25533.1
Unique Namecds5154
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:308248..308272 -
Alignment locationCM002465.1:307238..308004 -
Alignment locationCM002465.1:307047..307148 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25533.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100032g19.276.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:308248..308272 -
CM002465.1supercontigCM002465.1:307238..308004 -
CM002465.1supercontigCM002465.1:307047..307148 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM25533.1 vs. NCBI_GenBank
Match: gi|585107299|gb|EWM25533.1| (hypothetical protein Naga_100032g19 [Nannochloropsis gaditana])

HSP 1 Score: 607.06 bits (1564), Expect = 0.000e+0
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
Query:    1 MEAGVLQARKTTDVVSALTFVMAGAAAGRLLASLRETCLPLMTTEFKEDVCLSILIYLVGYAALGGFSPLMPTKRKAWIMSVLCSLGMSLGSLPYVYRLVYIHGFDTGKMVYADDRLSVFVMSFFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYIYKLMCDVSPRVVVWPVCLPAMALHLFWFQGFIQQQMRLRTRSSEAGGSLWTLTYIFFVNIPFKWESLMWFWLHLEKTGGIS 297
            MEAGVLQARKTTDVVSALTFVMAGAAAGRLLASLRETCLPLMTTEFKEDVCLSILIYLVGYAALGGFSPLMPTKRKAWIMSVLCSLGMSLGSLPYVYRLVYIHGFDTGKMVYADDRLSVFVMSFFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYIYKLMCDVSPRVVVWPVCLPAMALHLFWFQGFIQQQMRLRTRSSEAGGSLWTLTYIFFVNIPFKWESLMWFWLHLEKTGGIS
Sbjct:    1 MEAGVLQARKTTDVVSALTFVMAGAAAGRLLASLRETCLPLMTTEFKEDVCLSILIYLVGYAALGGFSPLMPTKRKAWIMSVLCSLGMSLGSLPYVYRLVYIHGFDTGKMVYADDRLSVFVMSFFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYIYKLMCDVSPRVVVWPVCLPAMALHLFWFQGFIQQQMRLRTRSSEAGGSLWTLTYIFFVNIPFKWESLMWFWLHLEKTGGIS 297          
BLAST of EWM25533.1 vs. NCBI_GenBank
Match: gi|1132416395|gb|OLY78402.1| (hypothetical protein AYI68_g7549 [Smittium mucronatum])

HSP 1 Score: 126.716 bits (317), Expect = 1.363e-31
Identity = 71/211 (33.65%), Postives = 115/211 (54.50%), Query Frame = 0
Query:   59 VGYAALGGF-------SPLMPTKRKAWIMSVLCSLGMSLGSLPYVYRLVYIHGFDTGKMVYADDRLSVFVMSFFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYIYKLMCDVSPRVVVWPVCLPAMALHLFWFQGFIQQQMRLRTRSSEAG 262
            VG A L G        S     K+ AW+++ +  + ++  SLPY+Y L++ +  D  + + + D  S+    FF  +L  D+ +GLR Y S    +TG+FHH LY+    +  +   S   V   IME+PT+V+A+G ++K+MR D+LF S FF+TR++   + +Y+      P  +VW +   ++ LHL+WF  FI+QQ RL      A 
Sbjct:   16 VGSAVLNGIFFIVRKNSSYTTEKQLAWVLTFVSCVTVTCASLPYLY-LLFKNNLDVTRCI-SSDSFSLLTCGFFEAYLFWDLAIGLRYYRSTFDLVTGYFHHGLYILMVYYVSVIGYSAIFVLCCIMELPTIVLAVGCINKNMRKDWLFASCFFSTRLLLHVVLLYRFY-SYFPDRLVWKLVASSLPLHLYWFSNFIKQQKRLYKNRKNAS 223          
BLAST of EWM25533.1 vs. NCBI_GenBank
Match: gi|1183491673|gb|ORZ15355.1| (hypothetical protein BCR42DRAFT_393241 [Absidia repens])

HSP 1 Score: 127.872 bits (320), Expect = 1.400e-30
Identity = 75/199 (37.69%), Postives = 109/199 (54.77%), Query Frame = 0
Query:   74 KRKAWIMSVLCSLGMSLGSLPYVYRLVYIHGFDTGKMVYADDR------LSVFVMSFFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYIYKL--MCDVSPRVVVWPVCLPAMALHLFWFQGFIQQQMRL-RTRSSEAGG 263
            +++A+I+S+L S   S+GSLPYVY++VY    D  +++           LSV +  FFMTFL LD+++G   YPS+I  LTGW HH  Y C   W +    +   +A  ++E+PT ++ALG +    R D+LF S F +TRIV+    I     +    P        LP   +H++WF GFI+QQ RL R R   A  
Sbjct:   45 RQRAYILSLLSSGVTSMGSLPYVYQVVYQQRGDLNQLLTTSSSPPFLALLSVALTIFFMTFLCLDLIIGWYRYPSKIDMLTGWVHHITYFCLLSWVLNQHFTGVFIAMCLLEIPTFLLALGSIHSPWRRDYLFASAFLSTRIVFHSFMIASAFRLYRFGPITCALSAFLP---VHIYWFFGFIKQQKRLYRQRKLNAAA 240          
BLAST of EWM25533.1 vs. NCBI_GenBank
Match: gi|585101859|gb|EWM21604.1| (hypothetical protein Naga_100012g31 [Nannochloropsis gaditana])

HSP 1 Score: 125.561 bits (314), Expect = 1.969e-30
Identity = 76/225 (33.78%), Postives = 124/225 (55.11%), Query Frame = 0
Query:   21 VMAGAAAGRLLASLRETCLPLMTTEFKEDVCLSILIYLVGYAALGGFSPLMPTKRKAWIMSVLCSLGMSLGSLPYVYRLVYIHGFDTGKMVYADDRLSVFVMSFFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYIYKLMCDV-SPRVVVWPVCLPAMALHLFWF 244
            V A A  G +  S  +   P +   F  D+ LS      G+  +   +P M  KR AW++S   S   +  S+  +Y+L +   +    +++ADDRLS F  +FF+ FL+LD+ +G+R YPS+I  L+GW HH  Y+    WA+    S+     + +E+PT ++A+G +    R+D+LFG TF  TRI Y  ++++ L+ ++  PR+ VW V      LH++WF
Sbjct:   34 VFATAVIGSMTPSSSDRWPPQL---FVADLLLSSAFLTAGFFWVK--TPDMTPKRLAWLLSAFSSFITASLSMSALYQL-FAQSWVIENVLFADDRLSRFTATFFIAFLILDLALGMRYYPSQIHLLSGWVHHCFYLGVLAWALHSHFSLGFCLFLPLEIPTFILAVGSIYPQRRSDWLFGMTFLITRICY-HLWLFVLVREIKDPRLPVWVVIAVTFCLHIYWF 251          
BLAST of EWM25533.1 vs. NCBI_GenBank
Match: gi|1134794693|gb|OMJ09798.1| (hypothetical protein AYI70_g10724 [Smittium culicis] >gi|1134816263|gb|OMJ22259.1| hypothetical protein AYI70_g2995 [Smittium culicis])

HSP 1 Score: 122.865 bits (307), Expect = 4.397e-30
Identity = 67/211 (31.75%), Postives = 117/211 (55.45%), Query Frame = 0
Query:   59 VGYAALGGF-------SPLMPTKRKAWIMSVLCSLGMSLGSLPYVYRLVYIHGFDTGKMVYADDRLSVFVMSFFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYIYKLMCDVSPRVVVWPVCLPAMALHLFWFQGFIQQQMRLRTRSSEAG 262
            VG A L G        S     K+ AW+++ +  + ++  SLPY++ L++ +  D  ++V + D  S+    FF  +L  D+ +G++ Y S   F+TG+FHH+ Y+    +  I   S   V   IME+PT+V+A+G + K++R D+LF S FF+TR++   + +Y+      P  +VW +   ++ LH++WF  FI+QQ R+  +   A 
Sbjct:   16 VGTAVLNGIFYIVRKNSSYSTEKQLAWVLTFVSCVTVTCASLPYLF-LLFKNNLDVTRLV-SSDSFSLLTCGFFEAYLFWDLAIGMKYYRSTFDFVTGYFHHAAYILLVYYVAISGYSAIFVLCCIMELPTIVLAVGSIHKNLRKDWLFASCFFSTRLLLHVVLLYRFYSHF-PDRLVWKLVASSLPLHIYWFSNFIKQQKRIFKKRKLAA 223          
BLAST of EWM25533.1 vs. NCBI_GenBank
Match: gi|1134792911|gb|OMJ08775.1| (hypothetical protein AYI69_g10937 [Smittium culicis])

HSP 1 Score: 121.324 bits (303), Expect = 1.720e-29
Identity = 65/211 (30.81%), Postives = 117/211 (55.45%), Query Frame = 0
Query:   59 VGYAALGGF-------SPLMPTKRKAWIMSVLCSLGMSLGSLPYVYRLVYIHGFDTGKMVYADDRLSVFVMSFFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYIYKLMCDVSPRVVVWPVCLPAMALHLFWFQGFIQQQMRLRTRSSEAG 262
            VG A L G        S     K+ AW+++ +  + ++  SLPY++ L++ +  D  +++ + D  S+    FF  +L  D+ +G++ Y S   F+TG+FHH+ Y+    +  +   S   V   IME+PT+V+A+G + K++R D+LF S FF+TR++   + +Y+      P  +VW +   ++ LH++WF  FI+QQ R+  +   A 
Sbjct:   16 VGTAVLNGIFYIVRKNSSYSTEKQLAWVLTFVSCVTVTCASLPYLF-LLFKNNLDVTRLI-SSDSFSLLTCGFFEAYLFWDLAIGMKYYRSTFDFITGYFHHAAYILLVYYVAVSGYSAIFVLCCIMELPTIVLAVGSIHKNLRKDWLFASCFFSTRLLLHVVLLYRFY-SYFPDRLVWKLVASSLPLHIYWFYNFIKQQKRIFKKRKLAA 223          
BLAST of EWM25533.1 vs. NCBI_GenBank
Match: gi|1021059499|emb|SAM04451.1| (hypothetical protein [Absidia glauca])

HSP 1 Score: 121.709 bits (304), Expect = 1.752e-28
Identity = 74/201 (36.82%), Postives = 112/201 (55.72%), Query Frame = 0
Query:   74 KRKAWIMSVLCSLGMSLGSLPYVYRLVYIHGFDTGKMVYADDR------LSVFVMSFFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYI---YKLMCDVSPRVVVWPVCLPAMALHLFWFQGFIQQQMRL-RTRSSEAGGS 264
            +++A+++S+L S  MS+GSLPYVY++++    +   ++           +SV + +FFMTFL LD++VG   Y S+I  LTGW HH  Y C   W +    +    A  ++EVPT ++ALG L +  R D+LF S F +TRI++    I   Y L     P  +     LP   +H++WF GFI+QQ RL R R  +   S
Sbjct:   42 RQRAYVLSLLSSFVMSMGSLPYVYQVLFQQRGNLHLLLVDSAHPNVLSLVSVALTTFFMTFLCLDLLVGWIHYRSKIDMLTGWVHHITYFCVLTWGLKQHYTGIFTAMCLLEVPTFLLALGSLHRPWRRDYLFASAFLSTRILFHSFMISSAYALF-QFGPITLALSAFLP---VHIYWFIGFIKQQKRLYRQRKEKVAKS 238          
BLAST of EWM25533.1 vs. NCBI_GenBank
Match: gi|511002222|gb|EPB83664.1| (hypothetical protein HMPREF1544_09580 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 114.005 bits (284), Expect = 3.474e-26
Identity = 66/194 (34.02%), Postives = 108/194 (55.67%), Query Frame = 0
Query:   74 KRKAWIMSVLCSLGMSLGSLPYVYRLVYIHGFDTGKMVYADDRLSVFVMSFFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYIYKLMC-----DVSPRVVVWPVCLPAMALHLFWFQGFIQQQMRLRTRSSEAG 262
            + +A++ ++L S   S  S+P VY L+  +G D  +++ A    +V   +FFMTFL+ D+V+G+  Y S+I  LTGW HH  Y+    WA+ +Q +   +    +E+PT ++ALG +   +R D++F STF  TRI++   + Y + C        P V+      P   +H FWF GFI+QQ+RL  +  +  
Sbjct:   39 RERAYVCTLLSSSITSTCSVPLVYTLL-TNGGDLTEIL-AYRTWTVVATTFFMTFLITDLVIGVVFYRSKIELLTGWIHHITYLGTLTWAIHNQYTAVFIMMCSLELPTFILALGSVRSQLRRDYVFASTFLVTRILF---HAYAIKCAWVMKPYGPVVIALSAFFP---VHCFWFYGFIKQQIRLAAKRKQEA 224          
BLAST of EWM25533.1 vs. NCBI_GenBank
Match: gi|671690504|emb|CDS05243.1| (hypothetical protein LRAMOSA07772 [Lichtheimia ramosa])

HSP 1 Score: 112.849 bits (281), Expect = 3.758e-26
Identity = 74/214 (34.58%), Postives = 120/214 (56.07%), Query Frame = 0
Query:   55 LIYLVGYAALGGF------SPLMPTKRK-AWIMSVLCSLGMSLGSLPYVYRLVYIHGFDTGKMVYADDRLSVFVMSFFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYIYKLMCDVSPRV-VVWPVCLPAMALHLFWFQGFIQQQMRLRTRSSE 260
            L +L  + +LGGF      + +  T+++ +W+++   SL  ++ S P  YR  +  G+D  +++  +       + FF+T+L+LD+ +G   Y   I+FLTGWFHH+LY+   LW +  + +       I+EVPTLV+ALG L +S R DFLF S+FF  R+V     I++L      RV  +W V +    LHL+WF G I  Q+R   ++ +
Sbjct:   20 LSFLASFISLGGFFYGCIYTGVAKTEKQISWLLTFASSLVCTIISTPCFYRF-WRSGWDI-RLLGMESTWHTASVCFFITYLILDLTMGSLYYRRRITFLTGWFHHTLYILILLWFLRLRTASFFCTAAILEVPTLVLALGSLKQSWRCDFLFASSFFVLRLVMHAWMIHEL--KQHHRVQSLWMVAVVVFPLHLYWFYGIISHQIRNNPKAIQ 229          
BLAST of EWM25533.1 vs. NCBI_GenBank
Match: gi|1027001363|ref|XP_016606419.1| (hypothetical protein SPPG_06086 [Spizellomyces punctatus DAOM BR117] >gi|907092299|gb|KNC98379.1| hypothetical protein SPPG_06086 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 114.39 bits (285), Expect = 4.158e-26
Identity = 75/204 (36.76%), Postives = 113/204 (55.39%), Query Frame = 0
Query:   62 AALGGFSPLMPT-----KRKAWIMSVLCSLGMSLGSLPYVYRLVYIHGFDTGKMVYADDRL--SVFVMS---FFMTFLVLDIVVGLRIYPSEISFLTGWFHHSLYMCACLWAMIHQISISAVATMIMEVPTLVMALGRLDKSMRNDFLFGSTFFATRIVYLGIYIYKLMCDVSPRVVVWPVCLPAMALHLFWFQGFIQQQMRLR 255
            AA      L PT     K++AWI++ L +L M+  SLP+ Y       F TG    AD  L  S F +    FF ++ V D+++G   Y SE+  L+G+ HHSLY       + + +        I+E+PTLVMA+GR++K+ R+D LFG+TFF TRI     ++Y++      R   W   L  + +HL WF+G++QQQ+R+R
Sbjct:   29 AAFFTLPSLFPTLFATEKQRAWIVTGLTALVMTSSSLPFHY------SFFTGSNSLADVSLMDSAFAIGLCGFFASYCVTDLLLGTLFYRSEVHPLSGYVHHSLYAWMVTSLVTYHVPGGFCTLSILELPTLVMAIGRINKAWRSDALFGATFFTTRICLHIYFVYEIWRAWPDRQFYW-FLLGVLPMHLLWFKGWVQQQIRMR 225          
The following BLAST results are available for this feature:
BLAST of EWM25533.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Position :
0
Zoom :
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01SequenceEWM25533.1OLY78402.1ORZ15355.1EWM21604.1OMJ09798.1OMJ08775.1SAM04451.1EPB83664.1CDS05243.1XP_016606419.1
Match NameE-valueIdentityDescription
gi|585107299|gb|EWM25533.1|0.000e+0100.00hypothetical protein Naga_100032g19 [Nannochlorops... [more]
gi|1132416395|gb|OLY78402.1|1.363e-3133.65hypothetical protein AYI68_g7549 [Smittium mucrona... [more]
gi|1183491673|gb|ORZ15355.1|1.400e-3037.69hypothetical protein BCR42DRAFT_393241 [Absidia re... [more]
gi|585101859|gb|EWM21604.1|1.969e-3033.78hypothetical protein Naga_100012g31 [Nannochlorops... [more]
gi|1134794693|gb|OMJ09798.1|4.397e-3031.75hypothetical protein AYI70_g10724 [Smittium culici... [more]
gi|1134792911|gb|OMJ08775.1|1.720e-2930.81hypothetical protein AYI69_g10937 [Smittium culici... [more]
gi|1021059499|emb|SAM04451.1|1.752e-2836.82hypothetical protein [Absidia glauca][more]
gi|511002222|gb|EPB83664.1|3.474e-2634.02hypothetical protein HMPREF1544_09580 [Mucor circi... [more]
gi|671690504|emb|CDS05243.1|3.758e-2634.58hypothetical protein LRAMOSA07772 [Lichtheimia ram... [more]
gi|1027001363|ref|XP_016606419.1|4.158e-2636.76hypothetical protein SPPG_06086 [Spizellomyces pun... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5166rna5166Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications