EWM30174.1, cds515 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30174.1 vs. NCBI_GenBank
Match: gi|585112831|gb|EWM30174.1| (uroporphyrinogen decarboxylase [Nannochloropsis gaditana]) HSP 1 Score: 595.119 bits (1533), Expect = 0.000e+0 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0 Query: 1 MEWSHPFPPPPHNSFSLFLSLPRPPSLPPPSLQTGPKIKPIRTWEAVKQMHLMDCMQTCPFVHQTLSDLRKEVGNQATVLGFVGLPYTLATYIVEGQSSKEYLEIKKMMFQEPALLQQMLSVLADNIGEYACFQIDAGAQVIQVFDSWAGHLSPADYDIFAAPYQRQVIEKIKAKHPTVPIIIYINKSGALLERMAQSGADMVSLDWTVTMEEGRRRLGSEMGVQGNLDPAILYAPKEVIKERAEQILREGKGFKHVMNLGHGIEATTPEENAKFFIDTVKAWRY 285 MEWSHPFPPPPHNSFSLFLSLPRPPSLPPPSLQTGPKIKPIRTWEAVKQMHLMDCMQTCPFVHQTLSDLRKEVGNQATVLGFVGLPYTLATYIVEGQSSKEYLEIKKMMFQEPALLQQMLSVLADNIGEYACFQIDAGAQVIQVFDSWAGHLSPADYDIFAAPYQRQVIEKIKAKHPTVPIIIYINKSGALLERMAQSGADMVSLDWTVTMEEGRRRLGSEMGVQGNLDPAILYAPKEVIKERAEQILREGKGFKHVMNLGHGIEATTPEENAKFFIDTVKAWRY Sbjct: 1 MEWSHPFPPPPHNSFSLFLSLPRPPSLPPPSLQTGPKIKPIRTWEAVKQMHLMDCMQTCPFVHQTLSDLRKEVGNQATVLGFVGLPYTLATYIVEGQSSKEYLEIKKMMFQEPALLQQMLSVLADNIGEYACFQIDAGAQVIQVFDSWAGHLSPADYDIFAAPYQRQVIEKIKAKHPTVPIIIYINKSGALLERMAQSGADMVSLDWTVTMEEGRRRLGSEMGVQGNLDPAILYAPKEVIKERAEQILREGKGFKHVMNLGHGIEATTPEENAKFFIDTVKAWRY 285
BLAST of EWM30174.1 vs. NCBI_GenBank
Match: gi|297573433|gb|ADI46567.1| (uroporphyrinogen decarboxylase, partial [Vaucheria litorea]) HSP 1 Score: 395.201 bits (1014), Expect = 2.286e-135 Identity = 181/253 (71.54%), Postives = 219/253 (86.56%), Query Frame = 0 Query: 33 QTGPKIKPIRTWEAVKQMHLMDCMQTCPFVHQTLSDLRKEVGNQATVLGFVGLPYTLATYIVEGQSSKEYLEIKKMMFQEPALLQQMLSVLADNIGEYACFQIDAGAQVIQVFDSWAGHLSPADYDIFAAPYQRQVIEKIKAKHPTVPIIIYINKSGALLERMAQSGADMVSLDWTVTMEEGRRRLGSEMGVQGNLDPAILYAPKEVIKERAEQILREGKGFKHVMNLGHGIEATTPEENAKFFIDTVKAWRY 285 +TGPK+ P+RTWE+V MH +D + CPFV QTL DL+KEVG+ ATVLGFVG PYTLATY+VEG SS+EYLEIKKMMF EP LL ML+ +AD+IG+Y +QI++GAQVIQVFDSWAGHLSP DYD+FAAPYQ++VI+KIK+ HP VPIIIYINKSGALLERM+QSGAD++SLDWTVT+EE R+R+G+++G+QGNLDPA L+AP EVIKER E+ILR G HVMNLGHGIEATT EE A+FFI+TVK +R+ Sbjct: 90 KTGPKLVPMRTWESVNAMHTIDSEKACPFVGQTLRDLKKEVGSNATVLGFVGCPYTLATYMVEGGSSREYLEIKKMMFTEPELLHAMLAKIADSIGDYGIYQIESGAQVIQVFDSWAGHLSPKDYDVFAAPYQKKVIQKIKSSHPEVPIIIYINKSGALLERMSQSGADIISLDWTVTIEEARKRIGNDIGIQGNLDPAALFAPNEVIKERTEEILRACGGRNHVMNLGHGIEATTSEEKAEFFINTVKNFRF 342
BLAST of EWM30174.1 vs. NCBI_GenBank
Match: gi|297573435|gb|ADI46568.1| (uroporphyrinogen decarboxylase, partial [Elysia chlorotica]) HSP 1 Score: 394.815 bits (1013), Expect = 3.208e-135 Identity = 181/253 (71.54%), Postives = 219/253 (86.56%), Query Frame = 0 Query: 33 QTGPKIKPIRTWEAVKQMHLMDCMQTCPFVHQTLSDLRKEVGNQATVLGFVGLPYTLATYIVEGQSSKEYLEIKKMMFQEPALLQQMLSVLADNIGEYACFQIDAGAQVIQVFDSWAGHLSPADYDIFAAPYQRQVIEKIKAKHPTVPIIIYINKSGALLERMAQSGADMVSLDWTVTMEEGRRRLGSEMGVQGNLDPAILYAPKEVIKERAEQILREGKGFKHVMNLGHGIEATTPEENAKFFIDTVKAWRY 285 +TGPK+ P+RTWE+V MH +D + CPFV QTL DL+KEVG+ ATVLGFVG PYTLATY+VEG SS+EYLEIKKMMF EP LL ML+ +AD+IG+Y +QI++GAQVIQVFDSWAGHLSP DYD+FAAPYQ++VI+KIK+ HP VPIIIYINKSGALLERM+QSGAD++SLDWTVT+EE R+R+G+++G+QGNLDPA L+AP EVIKER E+ILR G HVMNLGHGIEATT EE A+FFI+TVK +R+ Sbjct: 90 KTGPKLVPMRTWESVNAMHTIDSEKACPFVGQTLRDLKKEVGSNATVLGFVGCPYTLATYMVEGGSSREYLEIKKMMFTEPELLHAMLAKIADSIGDYGIYQIESGAQVIQVFDSWAGHLSPKDYDVFAAPYQKKVIQKIKSSHPEVPIIIYINKSGALLERMSQSGADIISLDWTVTIEEARKRIGNDIGIQGNLDPAALFAPNEVIKERTEEILRACGGRNHVMNLGHGIEATTSEEKAEFFINTVKNFRF 342
BLAST of EWM30174.1 vs. NCBI_GenBank
Match: gi|290766188|gb|ADD60150.1| (uroporphyrinogen decarboxylase, partial [Elysia chlorotica]) HSP 1 Score: 393.275 bits (1009), Expect = 1.404e-134 Identity = 181/253 (71.54%), Postives = 218/253 (86.17%), Query Frame = 0 Query: 33 QTGPKIKPIRTWEAVKQMHLMDCMQTCPFVHQTLSDLRKEVGNQATVLGFVGLPYTLATYIVEGQSSKEYLEIKKMMFQEPALLQQMLSVLADNIGEYACFQIDAGAQVIQVFDSWAGHLSPADYDIFAAPYQRQVIEKIKAKHPTVPIIIYINKSGALLERMAQSGADMVSLDWTVTMEEGRRRLGSEMGVQGNLDPAILYAPKEVIKERAEQILREGKGFKHVMNLGHGIEATTPEENAKFFIDTVKAWRY 285 +TGPK+ P+RTWE+V MH +D + CPFV QTL DL+KEVG+ ATVLGFVG PYTLATY+VEG SS+EYLEIKKMMF EP LL ML+ +AD+IG+Y +QI++GAQVIQVFDSWAGHLSP DYDIFAAPYQ++VI+KIK+ HP VPIIIYINKSGALLERM+QSGAD++SLDWTV +EE R+R+G+++G+QGNLDPA L+AP EVIKER E+ILR G HVMNLGHGIEATT EE A+FFI+TVK +R+ Sbjct: 90 KTGPKLVPMRTWESVNAMHTIDSEKACPFVGQTLRDLKKEVGSNATVLGFVGCPYTLATYMVEGGSSREYLEIKKMMFTEPELLHAMLAKIADSIGDYGIYQIESGAQVIQVFDSWAGHLSPKDYDIFAAPYQKKVIQKIKSSHPEVPIIIYINKSGALLERMSQSGADIISLDWTVMIEEARKRIGNDIGIQGNLDPAALFAPNEVIKERTEEILRACGGRNHVMNLGHGIEATTSEEKAEFFINTVKNFRF 342
BLAST of EWM30174.1 vs. NCBI_GenBank
Match: gi|299115710|emb|CBN74275.1| (Uroporphyrinogen decarboxylase, chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 385.956 bits (990), Expect = 1.571e-130 Identity = 179/253 (70.75%), Postives = 213/253 (84.19%), Query Frame = 0 Query: 33 QTGPKIKPIRTWEAVKQMHLMDCMQTCPFVHQTLSDLRKEVGNQATVLGFVGLPYTLATYIVEGQSSKEYLEIKKMMFQEPALLQQMLSVLADNIGEYACFQIDAGAQVIQVFDSWAGHLSPADYDIFAAPYQRQVIEKIKAKHPTVPIIIYINKSGALLERMAQSGADMVSLDWTVTMEEGRRRLGSEMGVQGNLDPAILYAPKEVIKERAEQILREGKGFKHVMNLGHGIEATTPEENAKFFIDTVKAWRY 285 + GPKI P+RTW+++K+MH +D + CPFV QTL++LR VGN+ATVLGFVG PYTLATY+VEG++SKEYLEIKKM F EP LL ML LAD+IG+YA +Q+D+GAQVIQVFDSWAGHLSP DYD FAAPYQR VIEKIKA HP VP+IIYINKSGALLERMA SG D+VSLDWTVT+ E R+R+G ++G+QGNLDPAIL+ IKER E+ILR+G G HVMNLGHGI+A TPE+NA FFIDTVK +R+ Sbjct: 170 KAGPKIPPMRTWDSMKKMHPIDPEKACPFVGQTLNELRGVVGNEATVLGFVGCPYTLATYMVEGKTSKEYLEIKKMAFLEPKLLHAMLKSLADSIGDYANYQVDSGAQVIQVFDSWAGHLSPKDYDTFAAPYQRMVIEKIKAVHPEVPVIIYINKSGALLERMATSGVDIVSLDWTVTVPEARKRIGDDIGIQGNLDPAILHGDHATIKERTEEILRDGGGRNHVMNLGHGIDAGTPEDNAAFFIDTVKNFRF 422
BLAST of EWM30174.1 vs. NCBI_GenBank
Match: gi|551647827|ref|XP_005826697.1| (hypothetical protein GUITHDRAFT_154354 [Guillardia theta CCMP2712] >gi|428170795|gb|EKX39717.1| hypothetical protein GUITHDRAFT_154354 [Guillardia theta CCMP2712]) HSP 1 Score: 355.14 bits (910), Expect = 8.232e-119 Identity = 167/253 (66.01%), Postives = 203/253 (80.24%), Query Frame = 0 Query: 34 TGPKIKPIRTWEAVKQMHLM-DCMQTCPFVHQTLSDLRKEVGNQATVLGFVGLPYTLATYIVEGQSSKEYLEIKKMMFQEPALLQQMLSVLADNIGEYACFQIDAGAQVIQVFDSWAGHLSPADYDIFAAPYQRQVIEKIKAKHPTVPIIIYINKSGALLERMAQSGADMVSLDWTVTMEEGRRRLGSEMGVQGNLDPAILYAPKEVIKERAEQILREGKGFKHVMNLGHGIEATTPEENAKFFIDTVKAWRY 285 +GPK+KP+RT E + M + D + PFV QTL +LRK VGN ATVLGFVGLP+TLATY+VEG +S EYLEIKKMM+ P+LL ML LA+NIG YA FQI+AGAQVIQ+FDSWAG LSP DYD+FA PYQ+ V+ IK KHP VPIIIYI KSGA +ERMA +G D+VSLDWTVT++E RRR+G ++G+QGNLDPAILY P+ +IKER E IL+ KG H+MNLGHGIEATTP+ N KFF+DTV A+++ Sbjct: 147 SGPKLKPLRTKEQIDTMKICSDWSTSMPFVKQTLGELRKRVGNSATVLGFVGLPFTLATYLVEGGTSSEYLEIKKMMYYNPSLLTAMLENLAENIGNYANFQIEAGAQVIQIFDSWAGSLSPEDYDLFAFPYQKMVVNAIKKKHPDVPIIIYIAKSGAHVERMADTGVDIVSLDWTVTIDEARRRIGRDIGLQGNLDPAILYGPEHIIKERTESILKMAKGRHHIMNLGHGIEATTPQPNVKFFVDTVHAFKH 399
BLAST of EWM30174.1 vs. NCBI_GenBank
Match: gi|88770678|gb|ABD51942.1| (chloroplast uroporphyrinogen decarboxylase, partial [Guillardia theta]) HSP 1 Score: 355.14 bits (910), Expect = 9.796e-119 Identity = 167/253 (66.01%), Postives = 203/253 (80.24%), Query Frame = 0 Query: 34 TGPKIKPIRTWEAVKQMHLM-DCMQTCPFVHQTLSDLRKEVGNQATVLGFVGLPYTLATYIVEGQSSKEYLEIKKMMFQEPALLQQMLSVLADNIGEYACFQIDAGAQVIQVFDSWAGHLSPADYDIFAAPYQRQVIEKIKAKHPTVPIIIYINKSGALLERMAQSGADMVSLDWTVTMEEGRRRLGSEMGVQGNLDPAILYAPKEVIKERAEQILREGKGFKHVMNLGHGIEATTPEENAKFFIDTVKAWRY 285 +GPK+KP+RT E + M + D + PFV QTL +LRK VGN ATVLGFVGLP+TLATY+VEG +S EYLEIKKMM+ P+LL ML LA+NIG YA FQI+AGAQVIQ+FDSWAG LSP DYD+FA PYQ+ V+ IK KHP VPIIIYI KSGA +ERMA +G D+VSLDWTVT++E RRR+G ++G+QGNLDPAILY P+ +IKER E IL+ KG H+MNLGHGIEATTP+ N KFF+DTV A+++ Sbjct: 152 SGPKLKPLRTKEQIDTMKICSDWSTSMPFVKQTLGELRKRVGNSATVLGFVGLPFTLATYLVEGGTSSEYLEIKKMMYYNPSLLTAMLENLAENIGNYANFQIEAGAQVIQIFDSWAGSLSPEDYDLFAFPYQKMVVNAIKKKHPDVPIIIYIAKSGAHVERMADTGVDIVSLDWTVTIDEARRRIGRDIGLQGNLDPAILYGPEHIIKERTESILKMAKGRHHIMNLGHGIEATTPQPNVKFFVDTVHAFKH 404
BLAST of EWM30174.1 vs. NCBI_GenBank
Match: gi|219115715|ref|XP_002178653.1| (uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410388|gb|EEC50318.1| uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 331.257 bits (848), Expect = 3.205e-109 Identity = 157/262 (59.92%), Postives = 200/262 (76.34%), Query Frame = 0 Query: 33 QTGPKIKPIRTWEAVKQMHLMDCMQTCPFVHQTLSDLRKEVGNQATVLGFVGLPYTLATYIVEGQSSKEYLEIKKMMFQEPALLQQMLSVLADNIGEYACFQIDAGAQVIQVFDSWAGHLSPADYDIFAAPYQRQVIEKIKAKHPTVPIIIYINKSGALLERMAQSGADMVSLDWTVTMEEGRRR---------LGSEMGVQGNLDPAILYAPKEVIKERAEQILREGKGFKHVMNLGHGIEATTPEENAKFFIDTVKAWRY 285 + GP ++P+R+++ +K+MH MD ++ PFV + L LR+EVG + VLGFVG PYTLATYIVEG++SKEYLEIKKM EP LL +L LADNIG+YA FQI+ GAQ+IQ+FDSWAGHLSP DY+ FAAPYQ+Q+++KIK K+P VP +IYI SGAL+ERMA +G D+VSLDWTV M +GR R L GVQGNLDPA+L+A +VI+ERA +IL++ HVMNLGHGIEA TPEENA FI+TV+ +R+ Sbjct: 146 KVGPLMEPMRSYDDIKKMHPMDPYKSTPFVAEALKALRQEVGPETAVLGFVGCPYTLATYIVEGKTSKEYLEIKKMALNEPDLLHAILQQLADNIGDYALFQIENGAQLIQIFDSWAGHLSPRDYNTFAAPYQKQILDKIKEKYPDVPTVIYIKHSGALIERMAATGVDVVSLDWTVDMADGRDRIEAGRKSAGLEGRGGVQGNLDPAVLFANHDVIEERAIEILKKAGSVGHVMNLGHGIEAATPEENAHHFIETVRGYRH 407
BLAST of EWM30174.1 vs. NCBI_GenBank
Match: gi|397621361|gb|EJK66251.1| (hypothetical protein THAOC_12840 [Thalassiosira oceanica]) HSP 1 Score: 323.939 bits (829), Expect = 1.595e-106 Identity = 153/262 (58.40%), Postives = 195/262 (74.43%), Query Frame = 0 Query: 33 QTGPKIKPIRTWEAVKQMHLMDCMQTCPFVHQTLSDLRKEVGNQATVLGFVGLPYTLATYIVEGQSSKEYLEIKKMMFQEPALLQQMLSVLADNIGEYACFQIDAGAQVIQVFDSWAGHLSPADYDIFAAPYQRQVIEKIKAKHPTVPIIIYINKSGALLERMAQSGADMVSLDWTVTMEEGRRR---------LGSEMGVQGNLDPAILYAPKEVIKERAEQILREGKGFKHVMNLGHGIEATTPEENAKFFIDTVKAWRY 285 + GP +KP+RTWE V++MHL+D PFV + L LR+EV + VLGFVG PYTLATY+VEG++SKEYLEIKKM F EP LL +L LA++I EYA FQI+ GAQ+IQ+FDSWAGHLSP DYD FAAPYQ+ +++++K ++P VP ++YI SGAL+ERMA +G D+VSLDWTV M EGR R L GVQGNLDP +L+ IK+RAE+I+R+ HVMNLGHGIEA TPEENA +FI+TV+ +R+ Sbjct: 128 KVGPVVKPMRTWEDVEKMHLIDPSAAAPFVAEALRTLREEVTPETAVLGFVGCPYTLATYLVEGKTSKEYLEIKKMAFTEPKLLHAILKNLAESIAEYALFQIENGAQLIQIFDSWAGHLSPRDYDEFAAPYQKMILDRVKERYPDVPTVVYIKHSGALIERMAATGVDVVSLDWTVDMAEGRERIENARKKAGLEGRGGVQGNLDPGVLFGDFATIKDRAEEIMRKAGPTGHVMNLGHGIEAATPEENAAYFIETVRNFRH 389
BLAST of EWM30174.1 vs. NCBI_GenBank
Match: gi|223994985|ref|XP_002287176.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976292|gb|EED94619.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 323.553 bits (828), Expect = 2.005e-106 Identity = 153/262 (58.40%), Postives = 196/262 (74.81%), Query Frame = 0 Query: 33 QTGPKIKPIRTWEAVKQMHLMDCMQTCPFVHQTLSDLRKEVGNQATVLGFVGLPYTLATYIVEGQSSKEYLEIKKMMFQEPALLQQMLSVLADNIGEYACFQIDAGAQVIQVFDSWAGHLSPADYDIFAAPYQRQVIEKIKAKHPTVPIIIYINKSGALLERMAQSGADMVSLDWTVTMEEGRRRLGSEM---------GVQGNLDPAILYAPKEVIKERAEQILREGKGFKHVMNLGHGIEATTPEENAKFFIDTVKAWRY 285 + GP +KP+RTW+ V +MHL+D ++ PF + L LR+EV + VLGFVG PYTLATY+VEG++SKEYLEIKKM F EP LL +L L+++I EYA FQI+ GAQ+IQ+FDSWAGHLSP DYD FAAPYQ+ +++KIK K+PTVP + YI SGAL+ERMA +G D+VSLDWTV M EGR R+ + GVQGNLDP +L+ IKERAE+I+++ HVMNLGHGIEA TPEENA +FI+TV+ +R+ Sbjct: 127 KVGPVVKPMRTWDDVNKMHLIDPSKSIPFTAEALRILRQEVTPETAVLGFVGCPYTLATYLVEGKTSKEYLEIKKMAFTEPKLLHAILKNLSESIAEYALFQIENGAQLIQIFDSWAGHLSPRDYDEFAAPYQKVILDKIKEKYPTVPTVTYIKHSGALIERMAATGVDVVSLDWTVDMAEGRERIAAGRAKAGLEGPGGVQGNLDPGVLFGDFATIKERAEEIMKKAGPTGHVMNLGHGIEAATPEENAAYFIETVRNYRH 388 The following BLAST results are available for this feature:
BLAST of EWM30174.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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