EWM25525.1, cds5139 (CDS) Nannochloropsis gaditana

Overview
NameEWM25525.1
Unique Namecds5139
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:270360..271460 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25525.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100032g1.268.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:270360..271460 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25525.1 vs. NCBI_GenBank
Match: gi|585107291|gb|EWM25525.1| (hypothetical protein Naga_100032g1 [Nannochloropsis gaditana])

HSP 1 Score: 710.679 bits (1833), Expect = 0.000e+0
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0 
Query:    1 MFPFSFHFQAALYSFFQTKPFEIRVSGLHARKTLWSQAPASIPPSSPPPSSSSIPLSASTHGNSSTSLLPAASSSSHPSQIDDTRAPGQPETSPAPPPKPRKKASISEKPRDNSETPNQTSLSTLSMAVEATAGATGSVEAGEGRGRQWEGAGSPVPSSGVGDQKKPSATSGTETPPASPGNKLGAFAPLTQRPTSWRRVVWLGKLFKLRFEDVSVEATAPLPSCPPPSPSPPPRLTVSAGFASFTLAATHVVHPRPLLSVDLRLRAAWIRVIAPLVNRADAGTQKAPCLVMNVEGVASGLVLEPGQARPASAYLAFQGTPCLHLDPSSLPPSLPPSPPPSPSPPPPRPPNRLPAPASFPGHHFLA 366
            MFPFSFHFQAALYSFFQTKPFEIRVSGLHARKTLWSQAPASIPPSSPPPSSSSIPLSASTHGNSSTSLLPAASSSSHPSQIDDTRAPGQPETSPAPPPKPRKKASISEKPRDNSETPNQTSLSTLSMAVEATAGATGSVEAGEGRGRQWEGAGSPVPSSGVGDQKKPSATSGTETPPASPGNKLGAFAPLTQRPTSWRRVVWLGKLFKLRFEDVSVEATAPLPSCPPPSPSPPPRLTVSAGFASFTLAATHVVHPRPLLSVDLRLRAAWIRVIAPLVNRADAGTQKAPCLVMNVEGVASGLVLEPGQARPASAYLAFQGTPCLHLDPSSLPPSLPPSPPPSPSPPPPRPPNRLPAPASFPGHHFLA
Sbjct:    1 MFPFSFHFQAALYSFFQTKPFEIRVSGLHARKTLWSQAPASIPPSSPPPSSSSIPLSASTHGNSSTSLLPAASSSSHPSQIDDTRAPGQPETSPAPPPKPRKKASISEKPRDNSETPNQTSLSTLSMAVEATAGATGSVEAGEGRGRQWEGAGSPVPSSGVGDQKKPSATSGTETPPASPGNKLGAFAPLTQRPTSWRRVVWLGKLFKLRFEDVSVEATAPLPSCPPPSPSPPPRLTVSAGFASFTLAATHVVHPRPLLSVDLRLRAAWIRVIAPLVNRADAGTQKAPCLVMNVEGVASGLVLEPGQARPASAYLAFQGTPCLHLDPSSLPPSLPPSPPPSPSPPPPRPPNRLPAPASFPGHHFLA 366
The following BLAST results are available for this feature:
BLAST of EWM25525.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107291|gb|EWM25525.1|0.000e+0100.00hypothetical protein Naga_100032g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5151rna5151Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications