EWM25541.1, cds5135 (CDS) Nannochloropsis gaditana

Overview
NameEWM25541.1
Unique Namecds5135
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:251988..252000 -
Alignment locationCM002465.1:251036..251259 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25541.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100232g5.7109.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:251988..252000 -
CM002465.1supercontigCM002465.1:251036..251259 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25541.1 vs. NCBI_GenBank
Match: gi|585107311|gb|EWM25541.1| (hypothetical protein Naga_100232g5 [Nannochloropsis gaditana])

HSP 1 Score: 159.458 bits (402), Expect = 1.354e-49
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 
Query:    1 MPREKVGPGAFLITAIQRASALGEDSGRSGHPLARGFPFDPKQGIIQPSVKLSLCTEPNHTLLIQRLGRNCALCLRIA 78
            MPREKVGPGAFLITAIQRASALGEDSGRSGHPLARGFPFDPKQGIIQPSVKLSLCTEPNHTLLIQRLGRNCALCLRIA
Sbjct:    1 MPREKVGPGAFLITAIQRASALGEDSGRSGHPLARGFPFDPKQGIIQPSVKLSLCTEPNHTLLIQRLGRNCALCLRIA 78
The following BLAST results are available for this feature:
BLAST of EWM25541.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107311|gb|EWM25541.1|1.354e-49100.00hypothetical protein Naga_100232g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5147rna5147Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications