EWM25555.1, cds5118 (CDS) Nannochloropsis gaditana

Overview
NameEWM25555.1
Unique Namecds5118
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:197824..198593 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25555.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101420g1.8851.mrna
GbkeyCDS
End range.
End range198593
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:197824..198593 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25555.1 vs. NCBI_GenBank
Match: gi|585107327|gb|EWM25555.1| (hypothetical protein Naga_101420g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 505.753 bits (1301), Expect = 0.000e+0
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0 
Query:    1 MASPRPASCTPFLSEGCLLSYKDIGAEDCPGSASPHGSDLGTEGQSFTPLTTWMAHQCVLDRQGMEGVEVKTPPLQCLGGGVPAPLLRTALAKIQQDLELDEEGGKAEGHGHNSDVEGTLHLSSHGGPVSRATGFASASAGHSGITLSPEGAGWGPAFASSCSLDSLTTDIMAGTDGLLTPDMLGGLGPWQTSPRFLGEGVGLREGKEGEGWELGETCEGNEEDEAAGGVREEAAPCGALPSSSCLYLPAPASPPP 256
            MASPRPASCTPFLSEGCLLSYKDIGAEDCPGSASPHGSDLGTEGQSFTPLTTWMAHQCVLDRQGMEGVEVKTPPLQCLGGGVPAPLLRTALAKIQQDLELDEEGGKAEGHGHNSDVEGTLHLSSHGGPVSRATGFASASAGHSGITLSPEGAGWGPAFASSCSLDSLTTDIMAGTDGLLTPDMLGGLGPWQTSPRFLGEGVGLREGKEGEGWELGETCEGNEEDEAAGGVREEAAPCGALPSSSCLYLPAPASPPP
Sbjct:    1 MASPRPASCTPFLSEGCLLSYKDIGAEDCPGSASPHGSDLGTEGQSFTPLTTWMAHQCVLDRQGMEGVEVKTPPLQCLGGGVPAPLLRTALAKIQQDLELDEEGGKAEGHGHNSDVEGTLHLSSHGGPVSRATGFASASAGHSGITLSPEGAGWGPAFASSCSLDSLTTDIMAGTDGLLTPDMLGGLGPWQTSPRFLGEGVGLREGKEGEGWELGETCEGNEEDEAAGGVREEAAPCGALPSSSCLYLPAPASPPP 256
The following BLAST results are available for this feature:
BLAST of EWM25555.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107327|gb|EWM25555.1|0.000e+0100.00hypothetical protein Naga_101420g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5130rna5130Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications