EWM25562.1, cds5110 (CDS) Nannochloropsis gaditana

Overview
NameEWM25562.1
Unique Namecds5110
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:177202..178509 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25562.1
ProductGuanylyl cyclase
Orig transcript idgnl|cribi|Naga_100359g2.214.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:177202..178509 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR018616Guanylyl_cyclase
Homology
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|585107337|gb|EWM25562.1| (Guanylyl cyclase [Nannochloropsis gaditana])

HSP 1 Score: 870.922 bits (2249), Expect = 0.000e+0
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0
Query:    1 MGSNVSRSTSTTDSTTASTGFTSSSSPSNNVVDLYGGTKELKDDLSTIIVRLRGVSDEEDRAIPTRNGGDRRTVREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSSPPPGASSVTPKPLTTEASSSSSIPIFSSDERQPQHEQGPHSETGASSSSMGSPSCHALNADPPSSSLPSLPLALPPPSSSSTAYCGHYILITGYRPASPPPCLPSSPPSSPSTTSGAGFFLYKDPAKAPLSPGEQEGKRGTREQEWCKDRLIEVSVLERARRAEGTDEDILVVEV 435
            MGSNVSRSTSTTDSTTASTGFTSSSSPSNNVVDLYGGTKELKDDLSTIIVRLRGVSDEEDRAIPTRNGGDRRTVREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSSPPPGASSVTPKPLTTEASSSSSIPIFSSDERQPQHEQGPHSETGASSSSMGSPSCHALNADPPSSSLPSLPLALPPPSSSSTAYCGHYILITGYRPASPPPCLPSSPPSSPSTTSGAGFFLYKDPAKAPLSPGEQEGKRGTREQEWCKDRLIEVSVLERARRAEGTDEDILVVEV
Sbjct:    1 MGSNVSRSTSTTDSTTASTGFTSSSSPSNNVVDLYGGTKELKDDLSTIIVRLRGVSDEEDRAIPTRNGGDRRTVREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSSPPPGASSVTPKPLTTEASSSSSIPIFSSDERQPQHEQGPHSETGASSSSMGSPSCHALNADPPSSSLPSLPLALPPPSSSSTAYCGHYILITGYRPASPPPCLPSSPPSSPSTTSGAGFFLYKDPAKAPLSPGEQEGKRGTREQEWCKDRLIEVSVLERARRAEGTDEDILVVEV 435          
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|553193551|ref|XP_005855797.1| (hypothetical protein NGA_2114100, partial [Nannochloropsis gaditana CCMP526] >gi|422293263|gb|EKU20563.1| hypothetical protein NGA_2114100, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 395.971 bits (1016), Expect = 1.322e-135
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query:   56 SDEEDRAIPTRNGGDRRTVREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPS 246
            SDEEDRAIPTRNGGDRRTVREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPS
Sbjct:    1 SDEEDRAIPTRNGGDRRTVREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPS 191          
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|255077351|ref|XP_002502318.1| (predicted protein [Micromonas commoda] >gi|226517583|gb|ACO63576.1| predicted protein [Micromonas commoda])

HSP 1 Score: 94.7449 bits (234), Expect = 6.622e-18
Identity = 96/334 (28.74%), Postives = 134/334 (40.12%), Query Frame = 0
Query:  100 HIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSSPPPGASSVTPKPLTTEASSSSSIPIFSSDERQPQHEQGPHSETGASSSSMGSPSCHALNADPPSSSLPSLPLALPPPSSSSTAYCGHYILITGYRPASPPPCLPSSPPSSPSTTSGAGFFLYKDPAKAPLSPGEQEGKRGTREQEWCKDRLIEVSVLERARRAEGTDEDILVV 433
            H+ Q   WDCG+AC+ M++  + ASA    L         L R  T SIWT+DL YLL+ +  G+   V   T + G    + + S+Y  +     D +RV  LF  A  NG+ +   SLS + ++     G  L++LLVD+             P L   P    + V P+        S ++                   TGA+    G P+  A  A   S S  +L     P    S  Y GHYI++ GY P                     G FL +DPA                     +D +I    LE+ARRA GTDEDIL+V
Sbjct:   65 HVKQTYNWDCGLACVLMVVRALGASAHHCDLRTLRQ----LCR--TTSIWTVDLAYLLRRF--GAD--VTFTTVTMGANPAYESESFYRDN--LREDCERVDALFEGARANGISIERKSLSLDAIKAYAGGGEYLVILLVDK-------------PKLGVKPRD--AVVLPEGENNGRGGSDALAWL----------------TGAA----GKPA--AWGARRGSESASTLANGAAP----SRGYTGHYIVVCGYNPVD-------------------GEFLCRDPASH------------------VRDLIITAENLEKARRAFGTDEDILLV 308          
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|676449034|ref|XP_009051924.1| (hypothetical protein LOTGIDRAFT_203742 [Lottia gigantea] >gi|556108670|gb|ESO97322.1| hypothetical protein LOTGIDRAFT_203742 [Lottia gigantea])

HSP 1 Score: 87.8113 bits (216), Expect = 3.028e-16
Identity = 64/197 (32.49%), Postives = 96/197 (48.73%), Query Frame = 0
Query:   74 VREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRL--LPSSSSLPSAPPSLPSSPPPGASSV 268
            + EE++ T + ++  I+       + HI Q  TWDCG+AC  MIL ++  + PF+S  I   +   L R G  ++WTIDL YL+K Y    Q    L T + G   + A  SYY     F  D  R+  +F  A  NG++V + S+S ED+ D +    + + L+   +L  L  S  L      + SSP  G   V
Sbjct:    1 MEEELNDTGDDKIKCID-------VPHIKQIYTWDCGLACASMILKYL--NIPFTSNDIYNIQVKDLLRCG-ENVWTIDLAYLMKHYGVSHQ----LYTITLGANQQFAQSSYYL--SNFTKDEDRINNMFEKAGENGVKVEKRSISIEDIIDHIKNNNLAICLIDWLKLDCLWCSKKLCFCCFDICSSPYVGHFVV 181          
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|676391131|ref|XP_009038843.1| (hypothetical protein AURANDRAFT_5414, partial [Aureococcus anophagefferens] >gi|323450519|gb|EGB06400.1| hypothetical protein AURANDRAFT_5414, partial [Aureococcus anophagefferens])

HSP 1 Score: 80.8777 bits (198), Expect = 4.165e-14
Identity = 55/163 (33.74%), Postives = 89/163 (54.60%), Query Frame = 0
Query:   98 LQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSS 260
            + H+ Q+  WDCG+AC+ M+L+  AA  P        + D + A  GTRS+WT+DL + LK +     R VF  T + G    +  +S+Y +  +  +D +RV  LF  A    + + +G++  + L +L+ T R L++ LVD R L S +++  A  SLP S
Sbjct:    1 VAHVRQRMAWDCGLACVLMVLS--AAEFP----RYDATWDRVHAACGTRSVWTVDLAFALKAF---GVRFVF-ATKTLGCDPSYRDMSFYKR--ELSLDERRVAGLFERAFAGEICLRKGTVPSDALGELLGTHRALVIALVDLRFLYSRTAVGRAIASLPYS 151          
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|449441342|ref|XP_004138441.1| (PREDICTED: protein GUCD1 isoform X1 [Cucumis sativus] >gi|778709412|ref|XP_011656397.1| PREDICTED: protein GUCD1 isoform X1 [Cucumis sativus] >gi|700190554|gb|KGN45758.1| hypothetical protein Csa_6G009370 [Cucumis sativus])

HSP 1 Score: 75.8702 bits (185), Expect = 8.723e-12
Identity = 50/148 (33.78%), Postives = 74/148 (50.00%), Query Frame = 0
Query:  100 HIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSS 247
            HI Q   WDCG+AC+ M+L  +  +             +L    GTRSIWT+DL YLL+ +            A P     ++  S+Y +  +   D  RV RLF+ A   G+++   SLS ED+  L+ +G  + ++LVDQR L  S
Sbjct:   57 HINQLQQWDCGLACVLMVLNILGINGC--------DIQSLADLCGTRSIWTVDLAYLLQRFSVSFSYFTVTFGADPN----YSVESFYKE--ELANDLVRVDRLFQKALEAGIKIECRSLSKEDISLLMLSGIYVAIVLVDQRRLSGS 190          
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|1102769499|ref|XP_019053957.1| (PREDICTED: protein GUCD1 isoform X3 [Nelumbo nucifera])

HSP 1 Score: 75.485 bits (184), Expect = 8.846e-12
Identity = 58/191 (30.37%), Postives = 91/191 (47.64%), Query Frame = 0
Query:   78 VHSTANARVGHIERGGTHLC-LQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVG-TRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSSPPPGAS 266
            VHS    ++ H     +H   + HI Q  +WDCG+AC+ M+L          +L I       LA +  T SIWT+DL YLL+ +          + A+P  C+     S+Y +  Q   D  RV RLF+ A  +G+ +   S+S +++  L+ +G+ + ++LVDQ  L   S L     S   +   G S
Sbjct:   36 VHSLNGGKIYHAGLPRSHFVEVPHISQLYSWDCGLACVLMVL---------RTLGIEQCDLCSLAELCRTTSIWTVDLAYLLQKFSVSFSFFTITLGANPSFCIE----SFYKE--QLPNDLVRVDRLFQKALESGINIQCRSISCKEISILILSGKYIAIVLVDQYKLRCRSWLEDVCVSAFYAGNSGYS 211          
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|1102769493|ref|XP_019053955.1| (PREDICTED: protein GUCD1 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 75.485 bits (184), Expect = 9.559e-12
Identity = 58/191 (30.37%), Postives = 91/191 (47.64%), Query Frame = 0
Query:   78 VHSTANARVGHIERGGTHLC-LQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVG-TRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSSPPPGAS 266
            VHS    ++ H     +H   + HI Q  +WDCG+AC+ M+L          +L I       LA +  T SIWT+DL YLL+ +          + A+P  C+     S+Y +  Q   D  RV RLF+ A  +G+ +   S+S +++  L+ +G+ + ++LVDQ  L   S L     S   +   G S
Sbjct:   36 VHSLNGGKIYHAGLPRSHFVEVPHISQLYSWDCGLACVLMVL---------RTLGIEQCDLCSLAELCRTTSIWTVDLAYLLQKFSVSFSFFTITLGANPSFCIE----SFYKE--QLPNDLVRVDRLFQKALESGINIQCRSISCKEISILILSGKYIAIVLVDQYKLRCRSWLEDVCVSAFYAGNSGYS 211          
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|527184330|gb|EPS58285.1| (guanylyl cyclase, partial [Genlisea aurea])

HSP 1 Score: 72.7886 bits (177), Expect = 2.080e-11
Identity = 47/145 (32.41%), Postives = 74/145 (51.03%), Query Frame = 0
Query:  100 HIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLL 244
            HI QQ +WDCG+AC+ M+L          +  I  + + L+    T+SIWT+DL YLL+ +          + A+P   V     ++Y    Q   D  RV  LF+ A   G+R+   S+S  ++ DL+ +G+ + + LVDQ  L
Sbjct:   55 HINQQHSWDCGLACVLMVL---------RARGIRCNIEELVKHCPTKSIWTVDLAYLLQKFSISFMYFTVTLEANPKFSVE----AFY--KDQLPNDLGRVNMLFQKAREAGIRIECRSVSGNEIADLILSGKYIAIALVDQYKL 184          
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|1102769496|ref|XP_019053956.1| (PREDICTED: protein GUCD1 isoform X2 [Nelumbo nucifera])

HSP 1 Score: 74.3294 bits (181), Expect = 2.734e-11
Identity = 54/172 (31.40%), Postives = 86/172 (50.00%), Query Frame = 0
Query:   78 VHSTANARVGHIERGGTHLC-LQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVG-TRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSS 247
            VHS    ++ H     +H   + HI Q  +WDCG+AC+ M+L          +L I       LA +  T SIWT+DL YLL+ +          + A+P  C+     S+Y +  Q   D  RV RLF+ A  +G+ +   S+S +++  L+ +G+ + ++LVDQ  L  S
Sbjct:   36 VHSLNGGKIYHAGLPRSHFVEVPHISQLYSWDCGLACVLMVL---------RTLGIEQCDLCSLAELCRTTSIWTVDLAYLLQKFSVSFSFFTITLGANPSFCIE----SFYKE--QLPNDLVRVDRLFQKALESGINIQCRSISCKEISILILSGKYIAIVLVDQYKLSRS 192          
The following BLAST results are available for this feature:
BLAST of EWM25562.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107337|gb|EWM25562.1|0.000e+0100.00Guanylyl cyclase [Nannochloropsis gaditana][more]
gi|553193551|ref|XP_005855797.1|1.322e-135100.00hypothetical protein NGA_2114100, partial [Nannoch... [more]
gi|255077351|ref|XP_002502318.1|6.622e-1828.74predicted protein [Micromonas commoda] >gi|2265175... [more]
gi|676449034|ref|XP_009051924.1|3.028e-1632.49hypothetical protein LOTGIDRAFT_203742 [Lottia gig... [more]
gi|676391131|ref|XP_009038843.1|4.165e-1433.74hypothetical protein AURANDRAFT_5414, partial [Aur... [more]
gi|449441342|ref|XP_004138441.1|8.723e-1233.78PREDICTED: protein GUCD1 isoform X1 [Cucumis sativ... [more]
gi|1102769499|ref|XP_019053957.1|8.846e-1230.37PREDICTED: protein GUCD1 isoform X3 [Nelumbo nucif... [more]
gi|1102769493|ref|XP_019053955.1|9.559e-1230.37PREDICTED: protein GUCD1 isoform X1 [Nelumbo nucif... [more]
gi|527184330|gb|EPS58285.1|2.080e-1132.41guanylyl cyclase, partial [Genlisea aurea][more]
gi|1102769496|ref|XP_019053956.1|2.734e-1131.40PREDICTED: protein GUCD1 isoform X2 [Nelumbo nucif... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5122rna5122Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications