EWM25562.1, cds5110 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|585107337|gb|EWM25562.1| (Guanylyl cyclase [Nannochloropsis gaditana]) HSP 1 Score: 870.922 bits (2249), Expect = 0.000e+0 Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0
Query: 1 MGSNVSRSTSTTDSTTASTGFTSSSSPSNNVVDLYGGTKELKDDLSTIIVRLRGVSDEEDRAIPTRNGGDRRTVREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSSPPPGASSVTPKPLTTEASSSSSIPIFSSDERQPQHEQGPHSETGASSSSMGSPSCHALNADPPSSSLPSLPLALPPPSSSSTAYCGHYILITGYRPASPPPCLPSSPPSSPSTTSGAGFFLYKDPAKAPLSPGEQEGKRGTREQEWCKDRLIEVSVLERARRAEGTDEDILVVEV 435
MGSNVSRSTSTTDSTTASTGFTSSSSPSNNVVDLYGGTKELKDDLSTIIVRLRGVSDEEDRAIPTRNGGDRRTVREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSSPPPGASSVTPKPLTTEASSSSSIPIFSSDERQPQHEQGPHSETGASSSSMGSPSCHALNADPPSSSLPSLPLALPPPSSSSTAYCGHYILITGYRPASPPPCLPSSPPSSPSTTSGAGFFLYKDPAKAPLSPGEQEGKRGTREQEWCKDRLIEVSVLERARRAEGTDEDILVVEV
Sbjct: 1 MGSNVSRSTSTTDSTTASTGFTSSSSPSNNVVDLYGGTKELKDDLSTIIVRLRGVSDEEDRAIPTRNGGDRRTVREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSSPPPGASSVTPKPLTTEASSSSSIPIFSSDERQPQHEQGPHSETGASSSSMGSPSCHALNADPPSSSLPSLPLALPPPSSSSTAYCGHYILITGYRPASPPPCLPSSPPSSPSTTSGAGFFLYKDPAKAPLSPGEQEGKRGTREQEWCKDRLIEVSVLERARRAEGTDEDILVVEV 435
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|553193551|ref|XP_005855797.1| (hypothetical protein NGA_2114100, partial [Nannochloropsis gaditana CCMP526] >gi|422293263|gb|EKU20563.1| hypothetical protein NGA_2114100, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 395.971 bits (1016), Expect = 1.322e-135 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 56 SDEEDRAIPTRNGGDRRTVREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPS 246
SDEEDRAIPTRNGGDRRTVREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPS
Sbjct: 1 SDEEDRAIPTRNGGDRRTVREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPS 191
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|255077351|ref|XP_002502318.1| (predicted protein [Micromonas commoda] >gi|226517583|gb|ACO63576.1| predicted protein [Micromonas commoda]) HSP 1 Score: 94.7449 bits (234), Expect = 6.622e-18 Identity = 96/334 (28.74%), Postives = 134/334 (40.12%), Query Frame = 0
Query: 100 HIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSSPPPGASSVTPKPLTTEASSSSSIPIFSSDERQPQHEQGPHSETGASSSSMGSPSCHALNADPPSSSLPSLPLALPPPSSSSTAYCGHYILITGYRPASPPPCLPSSPPSSPSTTSGAGFFLYKDPAKAPLSPGEQEGKRGTREQEWCKDRLIEVSVLERARRAEGTDEDILVV 433
H+ Q WDCG+AC+ M++ + ASA L L R T SIWT+DL YLL+ + G+ V T + G + + S+Y + D +RV LF A NG+ + SLS + ++ G L++LLVD+ P L P + V P+ S ++ TGA+ G P+ A A S S +L P S Y GHYI++ GY P G FL +DPA +D +I LE+ARRA GTDEDIL+V
Sbjct: 65 HVKQTYNWDCGLACVLMVVRALGASAHHCDLRTLRQ----LCR--TTSIWTVDLAYLLRRF--GAD--VTFTTVTMGANPAYESESFYRDN--LREDCERVDALFEGARANGISIERKSLSLDAIKAYAGGGEYLVILLVDK-------------PKLGVKPRD--AVVLPEGENNGRGGSDALAWL----------------TGAA----GKPA--AWGARRGSESASTLANGAAP----SRGYTGHYIVVCGYNPVD-------------------GEFLCRDPASH------------------VRDLIITAENLEKARRAFGTDEDILLV 308
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|676449034|ref|XP_009051924.1| (hypothetical protein LOTGIDRAFT_203742 [Lottia gigantea] >gi|556108670|gb|ESO97322.1| hypothetical protein LOTGIDRAFT_203742 [Lottia gigantea]) HSP 1 Score: 87.8113 bits (216), Expect = 3.028e-16 Identity = 64/197 (32.49%), Postives = 96/197 (48.73%), Query Frame = 0
Query: 74 VREEVHSTANARVGHIERGGTHLCLQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRL--LPSSSSLPSAPPSLPSSPPPGASSV 268
+ EE++ T + ++ I+ + HI Q TWDCG+AC MIL ++ + PF+S I + L R G ++WTIDL YL+K Y Q L T + G + A SYY F D R+ +F A NG++V + S+S ED+ D + + + L+ +L L S L + SSP G V
Sbjct: 1 MEEELNDTGDDKIKCID-------VPHIKQIYTWDCGLACASMILKYL--NIPFTSNDIYNIQVKDLLRCG-ENVWTIDLAYLMKHYGVSHQ----LYTITLGANQQFAQSSYYL--SNFTKDEDRINNMFEKAGENGVKVEKRSISIEDIIDHIKNNNLAICLIDWLKLDCLWCSKKLCFCCFDICSSPYVGHFVV 181
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|676391131|ref|XP_009038843.1| (hypothetical protein AURANDRAFT_5414, partial [Aureococcus anophagefferens] >gi|323450519|gb|EGB06400.1| hypothetical protein AURANDRAFT_5414, partial [Aureococcus anophagefferens]) HSP 1 Score: 80.8777 bits (198), Expect = 4.165e-14 Identity = 55/163 (33.74%), Postives = 89/163 (54.60%), Query Frame = 0
Query: 98 LQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSS 260
+ H+ Q+ WDCG+AC+ M+L+ AA P + D + A GTRS+WT+DL + LK + R VF T + G + +S+Y + + +D +RV LF A + + +G++ + L +L+ T R L++ LVD R L S +++ A SLP S
Sbjct: 1 VAHVRQRMAWDCGLACVLMVLS--AAEFP----RYDATWDRVHAACGTRSVWTVDLAFALKAF---GVRFVF-ATKTLGCDPSYRDMSFYKR--ELSLDERRVAGLFERAFAGEICLRKGTVPSDALGELLGTHRALVIALVDLRFLYSRTAVGRAIASLPYS 151
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|449441342|ref|XP_004138441.1| (PREDICTED: protein GUCD1 isoform X1 [Cucumis sativus] >gi|778709412|ref|XP_011656397.1| PREDICTED: protein GUCD1 isoform X1 [Cucumis sativus] >gi|700190554|gb|KGN45758.1| hypothetical protein Csa_6G009370 [Cucumis sativus]) HSP 1 Score: 75.8702 bits (185), Expect = 8.723e-12 Identity = 50/148 (33.78%), Postives = 74/148 (50.00%), Query Frame = 0
Query: 100 HIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSS 247
HI Q WDCG+AC+ M+L + + +L GTRSIWT+DL YLL+ + A P ++ S+Y + + D RV RLF+ A G+++ SLS ED+ L+ +G + ++LVDQR L S
Sbjct: 57 HINQLQQWDCGLACVLMVLNILGINGC--------DIQSLADLCGTRSIWTVDLAYLLQRFSVSFSYFTVTFGADPN----YSVESFYKE--ELANDLVRVDRLFQKALEAGIKIECRSLSKEDISLLMLSGIYVAIVLVDQRRLSGS 190
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|1102769499|ref|XP_019053957.1| (PREDICTED: protein GUCD1 isoform X3 [Nelumbo nucifera]) HSP 1 Score: 75.485 bits (184), Expect = 8.846e-12 Identity = 58/191 (30.37%), Postives = 91/191 (47.64%), Query Frame = 0
Query: 78 VHSTANARVGHIERGGTHLC-LQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVG-TRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSSPPPGAS 266
VHS ++ H +H + HI Q +WDCG+AC+ M+L +L I LA + T SIWT+DL YLL+ + + A+P C+ S+Y + Q D RV RLF+ A +G+ + S+S +++ L+ +G+ + ++LVDQ L S L S + G S
Sbjct: 36 VHSLNGGKIYHAGLPRSHFVEVPHISQLYSWDCGLACVLMVL---------RTLGIEQCDLCSLAELCRTTSIWTVDLAYLLQKFSVSFSFFTITLGANPSFCIE----SFYKE--QLPNDLVRVDRLFQKALESGINIQCRSISCKEISILILSGKYIAIVLVDQYKLRCRSWLEDVCVSAFYAGNSGYS 211
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|1102769493|ref|XP_019053955.1| (PREDICTED: protein GUCD1 isoform X1 [Nelumbo nucifera]) HSP 1 Score: 75.485 bits (184), Expect = 9.559e-12 Identity = 58/191 (30.37%), Postives = 91/191 (47.64%), Query Frame = 0
Query: 78 VHSTANARVGHIERGGTHLC-LQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVG-TRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSSSSLPSAPPSLPSSPPPGAS 266
VHS ++ H +H + HI Q +WDCG+AC+ M+L +L I LA + T SIWT+DL YLL+ + + A+P C+ S+Y + Q D RV RLF+ A +G+ + S+S +++ L+ +G+ + ++LVDQ L S L S + G S
Sbjct: 36 VHSLNGGKIYHAGLPRSHFVEVPHISQLYSWDCGLACVLMVL---------RTLGIEQCDLCSLAELCRTTSIWTVDLAYLLQKFSVSFSFFTITLGANPSFCIE----SFYKE--QLPNDLVRVDRLFQKALESGINIQCRSISCKEISILILSGKYIAIVLVDQYKLRCRSWLEDVCVSAFYAGNSGYS 211
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|527184330|gb|EPS58285.1| (guanylyl cyclase, partial [Genlisea aurea]) HSP 1 Score: 72.7886 bits (177), Expect = 2.080e-11 Identity = 47/145 (32.41%), Postives = 74/145 (51.03%), Query Frame = 0
Query: 100 HIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVGTRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLL 244
HI QQ +WDCG+AC+ M+L + I + + L+ T+SIWT+DL YLL+ + + A+P V ++Y Q D RV LF+ A G+R+ S+S ++ DL+ +G+ + + LVDQ L
Sbjct: 55 HINQQHSWDCGLACVLMVL---------RARGIRCNIEELVKHCPTKSIWTVDLAYLLQKFSISFMYFTVTLEANPKFSVE----AFY--KDQLPNDLGRVNMLFQKAREAGIRIECRSVSGNEIADLILSGKYIAIALVDQYKL 184
BLAST of EWM25562.1 vs. NCBI_GenBank
Match: gi|1102769496|ref|XP_019053956.1| (PREDICTED: protein GUCD1 isoform X2 [Nelumbo nucifera]) HSP 1 Score: 74.3294 bits (181), Expect = 2.734e-11 Identity = 54/172 (31.40%), Postives = 86/172 (50.00%), Query Frame = 0
Query: 78 VHSTANARVGHIERGGTHLC-LQHIPQQATWDCGIACLQMILTHVAASAPFSSLSIPPSRDALLARVG-TRSIWTIDLLYLLKPYLTGSQRAVFLVTASPGVCVRHATLSYYTKSGQFGVDRQRVLRLFRAAPGNGLRVYEGSLSWEDLRDLVCTGRVLLVLLVDQRLLPSS 247
VHS ++ H +H + HI Q +WDCG+AC+ M+L +L I LA + T SIWT+DL YLL+ + + A+P C+ S+Y + Q D RV RLF+ A +G+ + S+S +++ L+ +G+ + ++LVDQ L S
Sbjct: 36 VHSLNGGKIYHAGLPRSHFVEVPHISQLYSWDCGLACVLMVL---------RTLGIEQCDLCSLAELCRTTSIWTVDLAYLLQKFSVSFSFFTITLGANPSFCIE----SFYKE--QLPNDLVRVDRLFQKALESGINIQCRSISCKEISILILSGKYIAIVLVDQYKLSRS 192 The following BLAST results are available for this feature:
BLAST of EWM25562.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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