EWM30173.1, cds511 (CDS) Nannochloropsis gaditana

Overview
NameEWM30173.1
Unique Namecds511
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1280425..1281729 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30173.1
Productisobutyryl- mitochondrial
Orig transcript idgnl|cribi|Naga_100096g20.981.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1280425..1281729 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660flavin adenine dinucleotide binding
GO:0003995acyl-CoA dehydrogenase activity
Vocabulary: INTERPRO
TermDefinition
IPR009100AcylCoA_DH/oxidase_NM_dom
IPR006089Acyl-CoA_DH_CS
IPR009075AcylCo_DH/oxidase_C
IPR013786AcylCoA_DH/ox_N
IPR006091Acyl-CoA_Oxase/DH_cen-dom
Homology
BLAST of EWM30173.1 vs. NCBI_GenBank
Match: gi|585112830|gb|EWM30173.1| (isobutyryl- mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 904.434 bits (2336), Expect = 0.000e+0
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0
Query:    1 MATFLRFPRRFITSPSITKFIAGTKRNRVPYVCIPTLSSIQSSHLATLPDIAAPTLGLDETQCEYFNLAHSFAKNELTPDNAAKWDSKEIFPVETMRKAAQLGFGAVFVREDVGGSGMSRLEGSVIFEALAAGCTSTAAYMTIHSMCGWMLDSFGTEAQRQRWLPRMATMDLLSSYCLTEPNSGSDAVSLSTKAVREGDSYVLNGSKAFISGAGVSDVYLVMCRTGEKGPRGISCILVEKGTEGLSFGAPEKKLGWKSQPTATVTFTDCRVPASNLIGVEGEGFKYAMKGLDGGRINIATCSVGAAQACVEKTRAYIMERRQFGKAIGENQYVQFKFAEMVTSVVGARLMVRQAARLLDAKDSQATVACAMAKKVATDSAFTVINDALQMHGGYGYLKDYHVERYLRDVRVHQILEGTNEIMQIIIARKLLQQD 434
            MATFLRFPRRFITSPSITKFIAGTKRNRVPYVCIPTLSSIQSSHLATLPDIAAPTLGLDETQCEYFNLAHSFAKNELTPDNAAKWDSKEIFPVETMRKAAQLGFGAVFVREDVGGSGMSRLEGSVIFEALAAGCTSTAAYMTIHSMCGWMLDSFGTEAQRQRWLPRMATMDLLSSYCLTEPNSGSDAVSLSTKAVREGDSYVLNGSKAFISGAGVSDVYLVMCRTGEKGPRGISCILVEKGTEGLSFGAPEKKLGWKSQPTATVTFTDCRVPASNLIGVEGEGFKYAMKGLDGGRINIATCSVGAAQACVEKTRAYIMERRQFGKAIGENQYVQFKFAEMVTSVVGARLMVRQAARLLDAKDSQATVACAMAKKVATDSAFTVINDALQMHGGYGYLKDYHVERYLRDVRVHQILEGTNEIMQIIIARKLLQQD
Sbjct:    1 MATFLRFPRRFITSPSITKFIAGTKRNRVPYVCIPTLSSIQSSHLATLPDIAAPTLGLDETQCEYFNLAHSFAKNELTPDNAAKWDSKEIFPVETMRKAAQLGFGAVFVREDVGGSGMSRLEGSVIFEALAAGCTSTAAYMTIHSMCGWMLDSFGTEAQRQRWLPRMATMDLLSSYCLTEPNSGSDAVSLSTKAVREGDSYVLNGSKAFISGAGVSDVYLVMCRTGEKGPRGISCILVEKGTEGLSFGAPEKKLGWKSQPTATVTFTDCRVPASNLIGVEGEGFKYAMKGLDGGRINIATCSVGAAQACVEKTRAYIMERRQFGKAIGENQYVQFKFAEMVTSVVGARLMVRQAARLLDAKDSQATVACAMAKKVATDSAFTVINDALQMHGGYGYLKDYHVERYLRDVRVHQILEGTNEIMQIIIARKLLQQD 434          
BLAST of EWM30173.1 vs. NCBI_GenBank
Match: gi|763067467|ref|WP_043949176.1| (acyl-CoA dehydrogenase [Candidatus Phaeomarinobacter ectocarpi] >gi|610511808|emb|CDO61364.1| Branched-chain acyl-CoA dehydrogenase [Candidatus Phaeomarinobacter ectocarpi])

HSP 1 Score: 522.702 bits (1345), Expect = 0.000e+0
Identity = 243/378 (64.29%), Postives = 298/378 (78.84%), Query Frame = 0
Query:   56 LGLDETQCEYFNLAHSFAKNELTPDNAAKWDSKEIFPVETMRKAAQLGFGAVFVREDVGGSGMSRLEGSVIFEALAAGCTSTAAYMTIHSMCGWMLDSFGTEAQRQRWLPRMATMDLLSSYCLTEPNSGSDAVSLSTKAVREGDSYVLNGSKAFISGAGVSDVYLVMCRTGEKGPRGISCILVEKGTEGLSFGAPEKKLGWKSQPTATVTFTDCRVPASNLIGVEGEGFKYAMKGLDGGRINIATCSVGAAQACVEKTRAYIMERRQFGKAIGENQYVQFKFAEMVTSVVGARLMVRQAARLLDAKDSQATVACAMAKKVATDSAFTVINDALQMHGGYGYLKDYHVERYLRDVRVHQILEGTNEIMQIIIARKLLQQ 433
              L E Q  +F+ A  FA NEL P +AA+WD K IFPV+TMRKAA LGF  ++VREDVGGS ++RL+ ++IFEAL+ GCTSTAAY++IH+M  WM+D+FG E QRQ+WLP + +MDL++SYCLTEP++GSDA SL TKAVR+GD YV+NGSKAFISG+G SDVY+ M RTG  G  G+SCI+VEKGT GLSFGA EKK+GW SQPTA V F DCRVP  NLIG EG+GFK AMKGLDGGR+NI  CS+G AQ  ++   AY  +R QFGKAI   Q  QFK A+M T +  ARL++RQAA  LD K   AT  CAMAK++ATD+ F V+N ALQ+HGGYGYLKDY +ER+LRDVRVHQILEGTNEIM++II+R++L +
Sbjct:    3 FALTEDQRAFFDTASDFAANELAP-HAAEWDEKAIFPVDTMRKAAALGFAGIYVREDVGGSALTRLDAALIFEALSQGCTSTAAYISIHNMASWMIDTFGNEDQRQKWLPSLTSMDLIASYCLTEPSAGSDAASLKTKAVRDGDHYVINGSKAFISGSGSSDVYVCMIRTGGDGAGGVSCIVVEKGTPGLSFGATEKKMGWNSQPTAAVIFEDCRVPVENLIGNEGDGFKIAMKGLDGGRLNIGACSLGTAQVALDTAIAYAKDREQFGKAISTFQATQFKLADMATELEAARLLLRQAATKLDQKAPDATQHCAMAKRLATDTGFEVVNQALQIHGGYGYLKDYPLERHLRDVRVHQILEGTNEIMRVIISREMLNR 379          
BLAST of EWM30173.1 vs. NCBI_GenBank
Match: gi|1129941346|ref|XP_019729929.1| (PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Hippocampus comes])

HSP 1 Score: 519.62 bits (1337), Expect = 1.063e-180
Identity = 238/380 (62.63%), Postives = 302/380 (79.47%), Query Frame = 0
Query:   54 PTLGLDETQCEYFNLAHSFAKNELTPDNAAKWDSKEIFPVETMRKAAQLGFGAVFVREDVGGSGMSRLEGSVIFEALAAGCTSTAAYMTIHSMCGWMLDSFGTEAQRQRWLPRMATMDLLSSYCLTEPNSGSDAVSLSTKAVREGDSYVLNGSKAFISGAGVSDVYLVMCRTGEKGPRGISCILVEKGTEGLSFGAPEKKLGWKSQPTATVTFTDCRVPASNLIGVEGEGFKYAMKGLDGGRINIATCSVGAAQACVEKTRAYIMERRQFGKAIGENQYVQFKFAEMVTSVVGARLMVRQAARLLDAKDSQATVACAMAKKVATDSAFTVINDALQMHGGYGYLKDYHVERYLRDVRVHQILEGTNEIMQIIIARKLLQQ 433
            P+ GL + Q E+  +A  FA NE+ P + A+WD KE+FPVETMRKAAQLGFG ++V+ DVGGSG+SRL+ SVIFEAL+ GC ST AY++IH+MC WM+DSFG E QRQ + P++ +M+  +SYCLTEP SGSDA SL T A R+GD Y+LNGSKAFISG G SD+Y+VMCRTG KGP+GISC+LVEKGT GLSFG  E+K+GW SQPT  V F DC VPASNL+GVEG+GF  AMKGL+GGRINIA+CS+GAA A ++ TR +++ R+QFG+ +  NQ++QFK AEM T +V +RL+VRQAA  L  + + A   C+MAK  ATD  F + N ALQMHGGYGYLKDY V++++RD+RVHQILEGTNE+M++II+R LL +
Sbjct:   49 PSHGLTDEQKEFQKVAFDFAANEMAP-HMAEWDQKEMFPVETMRKAAQLGFGGIYVQPDVGGSGLSRLDTSVIFEALSTGCVSTTAYISIHNMCAWMIDSFGNEEQRQTFCPQLCSMEKFASYCLTEPGSGSDAASLLTSAQRQGDHYILNGSKAFISGGGESDIYVVMCRTGAKGPKGISCLLVEKGTPGLSFGKKEQKVGWNSQPTRAVIFEDCAVPASNLLGVEGQGFTIAMKGLNGGRINIASCSLGAAHASIQLTRDHLLVRKQFGETLSNNQFLQFKLAEMATDLVASRLLVRQAAVALQEERADAVQLCSMAKLFATDHCFNICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILEGTNEVMRMIISRSLLTE 427          
BLAST of EWM30173.1 vs. NCBI_GenBank
Match: gi|1160143688|ref|XP_020373019.1| (isobutyryl-CoA dehydrogenase, mitochondrial [Rhincodon typus])

HSP 1 Score: 516.924 bits (1330), Expect = 9.341e-180
Identity = 242/402 (60.20%), Postives = 310/402 (77.11%), Query Frame = 0
Query:   32 VCIPTLSSIQSSHLATLPDIAAPTLGLDETQCEYFNLAHSFAKNELTPDNAAKWDSKEIFPVETMRKAAQLGFGAVFVREDVGGSGMSRLEGSVIFEALAAGCTSTAAYMTIHSMCGWMLDSFGTEAQRQRWLPRMATMDLLSSYCLTEPNSGSDAVSLSTKAVREGDSYVLNGSKAFISGAGVSDVYLVMCRTGEKGPRGISCILVEKGTEGLSFGAPEKKLGWKSQPTATVTFTDCRVPASNLIGVEGEGFKYAMKGLDGGRINIATCSVGAAQACVEKTRAYIMERRQFGKAIGENQYVQFKFAEMVTSVVGARLMVRQAARLLDAKDSQATVACAMAKKVATDSAFTVINDALQMHGGYGYLKDYHVERYLRDVRVHQILEGTNEIMQIIIARKLLQQ 433
            + +P LS + +  + +  D   P++GL + Q E+  +A SFA NE++P + A+WD KEIFPVETMRKAAQLGFG ++VR DVGGSG+SR++ S+IFEAL+ GC ST AY++IH+MC WM+D+FG+E QR    P++ +M+  +SYCLTEP SGSDA SL T A R+GDSYVLNGSKAFISG G +D+Y++MCRTG+KGP+GISC+LVEKGT GLSFG  E+K+GW SQPT  V F DC VP SNLIG EGEGF  AM GL+GGRINIA+CS+GAA A +  T+ ++  R+QFGK +  +QY+QFK AEM T +V ARLMVR AA  L      A   CAMAK  ATD  FT+ N ALQMHGGYGYLKDY V++++RD+RVHQILEGTNE+M+++I+R LL++
Sbjct:   22 IWVPLLSPVPNRTVYSCID---PSIGLSDDQKEFQKIAFSFALNEMSP-HMAEWDQKEIFPVETMRKAAQLGFGGIYVRPDVGGSGLSRVDTSIIFEALSTGCASTTAYISIHNMCAWMIDTFGSEEQRHMHCPKLCSMEKCASYCLTEPGSGSDAASLITTARRDGDSYVLNGSKAFISGGGDTDLYVLMCRTGDKGPKGISCLLVEKGTPGLSFGKKERKIGWNSQPTRAVIFEDCAVPVSNLIGKEGEGFSIAMNGLNGGRINIASCSLGAAYASILLTQDHLKVRKQFGKPLASSQYLQFKLAEMATGLVAARLMVRNAAAALQEGRQDAVALCAMAKLFATDECFTICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILEGTNEVMRMLISRNLLEE 419          
BLAST of EWM30173.1 vs. NCBI_GenBank
Match: gi|697480705|ref|XP_009672377.1| (PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial, partial [Struthio camelus australis])

HSP 1 Score: 514.998 bits (1325), Expect = 1.825e-179
Identity = 241/387 (62.27%), Postives = 300/387 (77.52%), Query Frame = 0
Query:   47 TLPDIAAPTLGLDETQCEYFNLAHSFAKNELTPDNAAKWDSKEIFPVETMRKAAQLGFGAVFVREDVGGSGMSRLEGSVIFEALAAGCTSTAAYMTIHSMCGWMLDSFGTEAQRQRWLPRMATMDLLSSYCLTEPNSGSDAVSLSTKAVREGDSYVLNGSKAFISGAGVSDVYLVMCRTGEKGPRGISCILVEKGTEGLSFGAPEKKLGWKSQPTATVTFTDCRVPASNLIGVEGEGFKYAMKGLDGGRINIATCSVGAAQACVEKTRAYIMERRQFGKAIGENQYVQFKFAEMVTSVVGARLMVRQAARLLDAKDSQATVACAMAKKVATDSAFTVINDALQMHGGYGYLKDYHVERYLRDVRVHQILEGTNEIMQIIIARKLLQQ 433
            ++P + A + GL E Q E+  +A  FA  EL P + A+WD KEIFPVE MRKAAQLGFG ++V+ DVGGSG+SRL+ S+IFEAL+ GCTST AY++IH+MC WM+D+FG E QR R+ P + +M+ L+SYCLTEP SGSDA SL T A R+GD+YVLNGSKAFISG G +DVY+VMCRTG  GP+GISC+++EKGT GLSFG  EKK+GW SQPT  V F DC VP SNL+G EGEGF  AMKGL+GGRINIA+CS+GAA A V   + ++  R+QFG+ +  NQY+QF+ AEM T +V ARLMVR AAR L      A V C+MAK  ATD  F + N ALQMHGGYGYLKDY V++++RD+RVHQILEGTNE+M++I+AR LLQ+
Sbjct:    1 SVPALLA-SAGLTEEQKEFQKVAFDFASKELAP-HMAEWDEKEIFPVEAMRKAAQLGFGGIYVKPDVGGSGLSRLDTSIIFEALSTGCTSTTAYLSIHNMCVWMIDTFGNEEQRHRFCPSLCSMEKLASYCLTEPGSGSDAASLLTSAKRKGDTYVLNGSKAFISGGGDTDVYVVMCRTGGPGPKGISCLVLEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCVVPVSNLLGAEGEGFNIAMKGLNGGRINIASCSLGAAHASVLLAQEHLTVRKQFGEPLANNQYLQFRLAEMATRLVAARLMVRNAARALQEGQKDAAVLCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILEGTNEVMRMIVARNLLQE 385          
BLAST of EWM30173.1 vs. NCBI_GenBank
Match: gi|1055572559|ref|WP_067214776.1| (acyl-CoA dehydrogenase [Stappia indica])

HSP 1 Score: 514.612 bits (1324), Expect = 1.872e-179
Identity = 238/377 (63.13%), Postives = 304/377 (80.64%), Query Frame = 0
Query:   56 LGLDETQCEYFNLAHSFAKNELTPDNAAKWDSKEIFPVETMRKAAQLGFGAVFVREDVGGSGMSRLEGSVIFEALAAGCTSTAAYMTIHSMCGWMLDSFGTEAQRQRWLPRMATMDLLSSYCLTEPNSGSDAVSLSTKAVREGDSYVLNGSKAFISGAGVSDVYLVMCRTGEKGPRGISCILVEKGTEGLSFGAPEKKLGWKSQPTATVTFTDCRVPASNLIGVEGEGFKYAMKGLDGGRINIATCSVGAAQACVEKTRAYIMERRQFGKAIGENQYVQFKFAEMVTSVVGARLMVRQAARLLDAKDSQATVACAMAKKVATDSAFTVINDALQMHGGYGYLKDYHVERYLRDVRVHQILEGTNEIMQIIIARKLLQ 432
              L E Q  + ++A  FA++E+ P +AA+WD K  FPVET+RKAA+LGFG ++V +DVGGSG+ RL+ +VIFE LAAGCTSTAAY++IH+M  WM+D FG++ QR+R+LP + +M   +SYCLTEP SGSDA SL T+A  +GD YVLNGSKAFISG GVSDVY+VM RTG +GP+GI+C++VEK T GLSFGA E KLGWKSQPTA V F+DCRVP +N IG EGEGF+ AM GLDGGR+NI  CS+GAAQ+C++++ AY+ ERRQFG+ + E Q +QF+ A+M T +  ARL++ +AA L+DAK   AT   AMAK++ATD  F+V+N+ALQ+HGGYGYL+DY VERYLRDVRVHQILEGTNEIM++IIAR LL+
Sbjct:    3 FALGEDQRAFQDVARQFARDEMEP-HAAEWDEKSFFPVETLRKAAELGFGGIYVGDDVGGSGLGRLDAAVIFEELAAGCTSTAAYISIHNMAAWMIDRFGSQEQRERFLPDLCSMARFASYCLTEPGSGSDAASLRTRAALDGDHYVLNGSKAFISGGGVSDVYVVMVRTGGEGPKGITCLVVEKDTPGLSFGAQEVKLGWKSQPTAQVNFSDCRVPVANRIGEEGEGFRIAMAGLDGGRLNIGACSLGAAQSCLDRSIAYLKERRQFGRPLAEFQALQFRLADMATELEAARLLLHKAATLVDAKTPDATRMAAMAKRMATDVGFSVVNEALQLHGGYGYLRDYPVERYLRDVRVHQILEGTNEIMRVIIARDLLK 378          
BLAST of EWM30173.1 vs. NCBI_GenBank
Match: gi|678213870|gb|KFV80849.1| (hypothetical protein N308_07827, partial [Struthio camelus australis])

HSP 1 Score: 513.072 bits (1320), Expect = 6.985e-179
Identity = 239/376 (63.56%), Postives = 293/376 (77.93%), Query Frame = 0
Query:   57 GLDETQCEYFNLAHSFAKNELTPDNAAKWDSKEIFPVETMRKAAQLGFGAVFVREDVGGSGMSRLEGSVIFEALAAGCTSTAAYMTIHSMCGWMLDSFGTEAQRQRWLPRMATMDLLSSYCLTEPNSGSDAVSLSTKAVREGDSYVLNGSKAFISGAGVSDVYLVMCRTGEKGPRGISCILVEKGTEGLSFGAPEKKLGWKSQPTATVTFTDCRVPASNLIGVEGEGFKYAMKGLDGGRINIATCSVGAAQACVEKTRAYIMERRQFGKAIGENQYVQFKFAEMVTSVVGARLMVRQAARLLDAKDSQATVACAMAKKVATDSAFTVINDALQMHGGYGYLKDYHVERYLRDVRVHQILEGTNEIMQIIIARKLLQ 432
            GL E Q E+  +A  FA  EL P + A+WD KEIFPVE MRKAAQLGFG ++V+ DVGGSG+SRL+ S+IFEAL+ GCTST AY++IH+MC WM+D+FG E QR R+ P + +M+ L+SYCLTEP SGSDA SL T A R+GD+YVLNGSKAFISG G +DVY+VMCRTG  GP+GISC+++EKGT GLSFG  EKK+GW SQPT  V F DC VP SNL+G EGEGF  AMKGL+GGRINIA+CS+GAA A V   + ++  R+QFG+ +  NQY+QF+ AEM T +V ARLMVR AAR L      A V C+MAK  ATD  F + N ALQMHGGYGYLKDY V++++RD+RVHQILEGTNE+M++I+AR LLQ
Sbjct:    3 GLTEEQKEFQKVAFDFASKELAP-HMAEWDEKEIFPVEAMRKAAQLGFGGIYVKPDVGGSGLSRLDTSIIFEALSTGCTSTTAYLSIHNMCVWMIDTFGNEEQRHRFCPSLCSMEKLASYCLTEPGSGSDAASLLTSAKRKGDTYVLNGSKAFISGGGDTDVYVVMCRTGGPGPKGISCLVLEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCVVPVSNLLGAEGEGFNIAMKGLNGGRINIASCSLGAAHASVLLAQEHLTVRKQFGEPLANNQYLQFRLAEMATRLVAARLMVRNAARALQEGQKDAAVLCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILEGTNEVMRMIVARNLLQ 377          
BLAST of EWM30173.1 vs. NCBI_GenBank
Match: gi|657938153|ref|WP_029639251.1| (acyl-CoA dehydrogenase [alpha proteobacterium Mf 1.05b.01])

HSP 1 Score: 513.072 bits (1320), Expect = 7.754e-179
Identity = 236/375 (62.93%), Postives = 299/375 (79.73%), Query Frame = 0
Query:   58 LDETQCEYFNLAHSFAKNELTPDNAAKWDSKEIFPVETMRKAAQLGFGAVFVREDVGGSGMSRLEGSVIFEALAAGCTSTAAYMTIHSMCGWMLDSFGTEAQRQRWLPRMATMDLLSSYCLTEPNSGSDAVSLSTKAVREGDSYVLNGSKAFISGAGVSDVYLVMCRTGEKGPRGISCILVEKGTEGLSFGAPEKKLGWKSQPTATVTFTDCRVPASNLIGVEGEGFKYAMKGLDGGRINIATCSVGAAQACVEKTRAYIMERRQFGKAIGENQYVQFKFAEMVTSVVGARLMVRQAARLLDAKDSQATVACAMAKKVATDSAFTVINDALQMHGGYGYLKDYHVERYLRDVRVHQILEGTNEIMQIIIARKLLQ 432
            L E Q  + ++A  FA++EL P  AA+WD   IFPV+TMRKAA LGF  ++VREDVGGS ++RL+ ++IFEAL+AGCTSTAAYM+IH+M  WM+D FG++ QR +WLP + TM+ ++SYCLTEP SGSDA SL TKAVR+ D YVLNGSKAFISG+G SDVY+ M RTGE GP+G+SC++VEKGT GLSFGA E+K+GW SQPTA V F D RVP  NLIG EG+GFK AM GLDGGR+NI  CS+G AQ  +E  +AY+ ER+QFG+ + + Q +QFK A+M T +  ARL++ QAA  +DAK   AT+  AMAK+ ATD+ F V+N+ALQ+HGGYGYLKDY +ER+LRDVRVHQILEGTNEIM++IIAR++L+
Sbjct:    5 LSEEQLAFQDVARGFAQDELAP-YAAEWDRDAIFPVDTMRKAAALGFAGIYVREDVGGSALTRLDAALIFEALSAGCTSTAAYMSIHNMASWMIDRFGSDEQRSKWLPDLTTMNKIASYCLTEPGSGSDAASLRTKAVRDDDHYVLNGSKAFISGSGTSDVYVCMVRTGEDGPKGVSCLVVEKGTPGLSFGATERKMGWNSQPTAAVIFEDARVPVENLIGEEGQGFKIAMMGLDGGRLNIGACSLGTAQTALETAKAYMQERKQFGRRLADFQALQFKLADMATELEAARLLLYQAAVKVDAKAPDATMQAAMAKRFATDTGFRVVNEALQIHGGYGYLKDYPLERHLRDVRVHQILEGTNEIMRVIIAREMLK 378          
BLAST of EWM30173.1 vs. NCBI_GenBank
Match: gi|552545438|ref|WP_023003798.1| (MULTISPECIES: acyl-CoA dehydrogenase [Labrenzia] >gi|550659380|gb|ERP85532.1| acyl-CoA dehydrogenase [Labrenzia sp. C1B10] >gi|550682708|gb|ERS07049.1| acyl-CoA dehydrogenase [Labrenzia sp. C1B70])

HSP 1 Score: 512.301 bits (1318), Expect = 1.511e-178
Identity = 236/375 (62.93%), Postives = 301/375 (80.27%), Query Frame = 0
Query:   58 LDETQCEYFNLAHSFAKNELTPDNAAKWDSKEIFPVETMRKAAQLGFGAVFVREDVGGSGMSRLEGSVIFEALAAGCTSTAAYMTIHSMCGWMLDSFGTEAQRQRWLPRMATMDLLSSYCLTEPNSGSDAVSLSTKAVREGDSYVLNGSKAFISGAGVSDVYLVMCRTGEKGPRGISCILVEKGTEGLSFGAPEKKLGWKSQPTATVTFTDCRVPASNLIGVEGEGFKYAMKGLDGGRINIATCSVGAAQACVEKTRAYIMERRQFGKAIGENQYVQFKFAEMVTSVVGARLMVRQAARLLDAKDSQATVACAMAKKVATDSAFTVINDALQMHGGYGYLKDYHVERYLRDVRVHQILEGTNEIMQIIIARKLLQ 432
            L+E Q  + ++A SF+++EL P  A +WD +  FP+ T+RKAA+LGFG ++V+EDVGGS ++RL+ ++IFE L+ GCTSTAAY++IH+M  W++DS+G+E  RQ++LPR+ TMDLL+SYCLTEP SGSDA SL T A  +GD YVLNGSKAFISG GVSD+Y VM RTG +GP G+SCILVEKGT GLSFGA E KLGWKSQPTA V F DCRVP SNLIG EG+GFK AM  LDGGR+NI  CS+GAAQAC++   AY+ ER+QFG+ I + Q +QF+ A+M T +  ARL++ +AA  +DAK   AT   AMAK++ATD+ F V+N+ALQ+HGGYGYL+DY +ERY RDVRVHQILEGTNEIM++IIAR+LL+
Sbjct:    5 LNEDQRAFQDMAASFSRDELAP-FAKEWDEESHFPIPTLRKAAELGFGGIYVKEDVGGSALTRLDATLIFEELSKGCTSTAAYISIHNMVAWIIDSYGSEDLRQKYLPRLCTMDLLTSYCLTEPGSGSDAASLRTSAKDDGDHYVLNGSKAFISGGGVSDLYAVMVRTGGEGPSGVSCILVEKGTPGLSFGANEVKLGWKSQPTAQVNFQDCRVPKSNLIGSEGQGFKIAMAALDGGRLNIGACSMGAAQACLDHALAYVQERKQFGRPIADFQALQFRLADMATELEAARLLLHKAASAVDAKSHDATKLAAMAKRLATDTGFKVVNEALQLHGGYGYLRDYPIERYFRDVRVHQILEGTNEIMRLIIARQLLK 378          
BLAST of EWM30173.1 vs. NCBI_GenBank
Match: gi|656016953|ref|WP_029056834.1| (acyl-CoA dehydrogenase [Stappia stellulata])

HSP 1 Score: 511.916 bits (1317), Expect = 2.391e-178
Identity = 236/376 (62.77%), Postives = 303/376 (80.59%), Query Frame = 0
Query:   58 LDETQCEYFNLAHSFAKNELTPDNAAKWDSKEIFPVETMRKAAQLGFGAVFVREDVGGSGMSRLEGSVIFEALAAGCTSTAAYMTIHSMCGWMLDSFGTEAQRQRWLPRMATMDLLSSYCLTEPNSGSDAVSLSTKAVREGDSYVLNGSKAFISGAGVSDVYLVMCRTGEKGPRGISCILVEKGTEGLSFGAPEKKLGWKSQPTATVTFTDCRVPASNLIGVEGEGFKYAMKGLDGGRINIATCSVGAAQACVEKTRAYIMERRQFGKAIGENQYVQFKFAEMVTSVVGARLMVRQAARLLDAKDSQATVACAMAKKVATDSAFTVINDALQMHGGYGYLKDYHVERYLRDVRVHQILEGTNEIMQIIIARKLLQQ 433
            L E Q  + ++A  FA++E+ P NA +WD    FP ET+RKAA+LGFG ++V +DVGGSG++RL+ +VIFE LAAGCTSTAAY++IH+M  WM+D FG +AQRQR+LP + TM+  +SYCLTEP SGSDA SL T+AVR+ D YVLNGSKAFISG G SD+Y+VM RTG+ GP+GISC++VEK   GLSFGA E KLGWKSQPTA V F+DCRVPA+N IG EG+GF+ AM GLDGGR+NI  CS+GAAQ+C++++ +Y+ ER+QFGK + E Q +QF+ A+M T +  ARL++ +AA L+DAK   AT   AMAK++ATD  F+V+N+ALQ+HGGYGYL+DY VER+LRDVRVHQILEGTNEIM++IIAR LL+ 
Sbjct:    5 LGEDQRAFQDVARQFARDEMEP-NAREWDETSRFPEETLRKAAELGFGGIYVGDDVGGSGLTRLDAAVIFEELAAGCTSTAAYISIHNMAAWMIDRFGVDAQRQRFLPALCTMEHFASYCLTEPGSGSDAASLRTRAVRDDDDYVLNGSKAFISGGGRSDIYVVMVRTGDAGPKGISCLVVEKDAPGLSFGAQEAKLGWKSQPTAQVNFSDCRVPAANRIGAEGDGFRIAMAGLDGGRLNIGACSLGAAQSCLDRSISYLKERKQFGKPLAEFQALQFRLADMATELEAARLLLHKAATLVDAKTPDATRMAAMAKRMATDVGFSVVNEALQLHGGYGYLRDYPVERFLRDVRVHQILEGTNEIMRMIIARDLLKD 379          
The following BLAST results are available for this feature:
BLAST of EWM30173.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112830|gb|EWM30173.1|0.000e+0100.00isobutyryl- mitochondrial [Nannochloropsis gaditan... [more]
gi|763067467|ref|WP_043949176.1|0.000e+064.29acyl-CoA dehydrogenase [Candidatus Phaeomarinobact... [more]
gi|1129941346|ref|XP_019729929.1|1.063e-18062.63PREDICTED: isobutyryl-CoA dehydrogenase, mitochond... [more]
gi|1160143688|ref|XP_020373019.1|9.341e-18060.20isobutyryl-CoA dehydrogenase, mitochondrial [Rhinc... [more]
gi|697480705|ref|XP_009672377.1|1.825e-17962.27PREDICTED: isobutyryl-CoA dehydrogenase, mitochond... [more]
gi|1055572559|ref|WP_067214776.1|1.872e-17963.13acyl-CoA dehydrogenase [Stappia indica][more]
gi|678213870|gb|KFV80849.1|6.985e-17963.56hypothetical protein N308_07827, partial [Struthio... [more]
gi|657938153|ref|WP_029639251.1|7.754e-17962.93acyl-CoA dehydrogenase [alpha proteobacterium Mf 1... [more]
gi|552545438|ref|WP_023003798.1|1.511e-17862.93MULTISPECIES: acyl-CoA dehydrogenase [Labrenzia] >... [more]
gi|656016953|ref|WP_029056834.1|2.391e-17862.77acyl-CoA dehydrogenase [Stappia stellulata][more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna511rna511Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications