EWM25567.1, cds5106 (CDS) Nannochloropsis gaditana

Overview
NameEWM25567.1
Unique Namecds5106
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:169381..169536 -
Alignment locationCM002465.1:169273..169330 -
Alignment locationCM002465.1:168928..169051 -
Alignment locationCM002465.1:168540..168630 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25567.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100664g2.4025.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:169381..169536 -
CM002465.1supercontigCM002465.1:169273..169330 -
CM002465.1supercontigCM002465.1:168928..169051 -
CM002465.1supercontigCM002465.1:168540..168630 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25567.1 vs. NCBI_GenBank
Match: gi|585107343|gb|EWM25567.1| (hypothetical protein Naga_100664g2 [Nannochloropsis gaditana])

HSP 1 Score: 284.263 bits (726), Expect = 4.651e-97
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 
Query:    1 MYAVTGLVVGACLGGRKPACCLKDTRRDPPAALASQPPSLNHGQYPNACPTGSLGRGDGLRWLESRPLYSAALVFWASICSLNWERPAFGCTWPTGATSRMSVRTKSRLIWGSGPRCPTACGTRTRLNGCWKAVTSPSIALV 142
            MYAVTGLVVGACLGGRKPACCLKDTRRDPPAALASQPPSLNHGQYPNACPTGSLGRGDGLRWLESRPLYSAALVFWASICSLNWERPAFGCTWPTGATSRMSVRTKSRLIWGSGPRCPTACGTRTRLNGCWKAVTSPSIALV
Sbjct:    1 MYAVTGLVVGACLGGRKPACCLKDTRRDPPAALASQPPSLNHGQYPNACPTGSLGRGDGLRWLESRPLYSAALVFWASICSLNWERPAFGCTWPTGATSRMSVRTKSRLIWGSGPRCPTACGTRTRLNGCWKAVTSPSIALV 142
The following BLAST results are available for this feature:
BLAST of EWM25567.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107343|gb|EWM25567.1|4.651e-97100.00hypothetical protein Naga_100664g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5118rna5118Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications