EWM25569.1, cds5102 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25569.1 vs. NCBI_GenBank
Match: gi|585107346|gb|EWM25569.1| (chaperone protein [Nannochloropsis gaditana]) HSP 1 Score: 419.083 bits (1076), Expect = 2.172e-148 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
Query: 1 MKDYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGISRVSTFYRPGGSHPGGEGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVHKEPFVKRRNPFMDIRPDNKGAQFFVRQKTKETQSVIDQSYKRGKAEKDLIVERMKARRAARMANRGYNEDSASAGGSCVIA 200
MKDYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGISRVSTFYRPGGSHPGGEGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVHKEPFVKRRNPFMDIRPDNKGAQFFVRQKTKETQSVIDQSYKRGKAEKDLIVERMKARRAARMANRGYNEDSASAGGSCVIA
Sbjct: 1 MKDYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGISRVSTFYRPGGSHPGGEGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVHKEPFVKRRNPFMDIRPDNKGAQFFVRQKTKETQSVIDQSYKRGKAEKDLIVERMKARRAARMANRGYNEDSASAGGSCVIA 200
BLAST of EWM25569.1 vs. NCBI_GenBank
Match: gi|299470626|emb|CBN78567.1| (Heat shock protein 40 like protein/ DnaJ domain containing protein [Ectocarpus siliculosus]) HSP 1 Score: 113.62 bits (283), Expect = 4.547e-28 Identity = 61/153 (39.87%), Postives = 90/153 (58.82%), Query Frame = 0
Query: 1 MKDYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGISRV---STFYRPGGSHPGGEGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVHKEPFVKRRNPFMDIRPDNKGAQFFVRQKTKE 150
M+DYY IL+V+R+AT EIK AY+ AL +HPDV ++ FK +EAY++L+D + R+ YD LG+ +V ST + + + +PPP KI + EW AWHYG + V KE FV+ N ++D+ N+ +F RQ+ KE
Sbjct: 1 MRDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDRTLGVRKVNSSSTRWADAAKKTKAQQPLYTAKPPPGMKIHNEGEWKAWHYGV-DAVQKEAFVQEAN-WLDLE-GNRHQAYFRRQEKKE 150
BLAST of EWM25569.1 vs. NCBI_GenBank
Match: gi|567945817|gb|ETK71628.1| (hypothetical protein L915_21157 [Phytophthora parasitica] >gi|567974470|gb|ETL25063.1| hypothetical protein L916_21032 [Phytophthora parasitica] >gi|568033851|gb|ETM31543.1| hypothetical protein L914_20902 [Phytophthora parasitica] >gi|570966073|gb|ETP29192.1| hypothetical protein F442_21623 [Phytophthora parasitica P10297]) HSP 1 Score: 84.7297 bits (208), Expect = 4.566e-17 Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = 0
Query: 3 DYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGISRVSTFYRPGGS-HP----GGEGDIRAPRPPPDFKIFDHDEWNAWHYG 113
DYY +L V+R+A+ +EIK AY A LHPDVTGN+E K FK ++EA+++LSD R++YD+ T+ G S HP GG D+RA RP + + W A HYG
Sbjct: 5 DYYRVLNVARTASFKEIKAAYFQLAKSLHPDVTGNDESKAERFKHVSEAHSVLSDPQKRREYDASRPAESFRTYDTSGMSQHPYAATGGAPDLRA-RP---LYGINEEIWLAHHYG 116
BLAST of EWM25569.1 vs. NCBI_GenBank
Match: gi|568003945|gb|ETL78282.1| (hypothetical protein L917_20889 [Phytophthora parasitica] >gi|970627872|gb|KUF75681.1| Chaperone protein DnaJ [Phytophthora nicotianae] >gi|970662196|gb|KUF99605.1| RAC-beta serine/threonine-protein kinase [Phytophthora nicotianae]) HSP 1 Score: 84.7297 bits (208), Expect = 5.462e-17 Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = 0
Query: 3 DYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGISRVSTFYRPGGS-HP----GGEGDIRAPRPPPDFKIFDHDEWNAWHYG 113
DYY +L V+R+A+ +EIK AY A LHPDVTGN+E K FK ++EA+++LSD R++YD+ T+ G S HP GG D+RA RP + + W A HYG
Sbjct: 5 DYYRVLNVARTASFKEIKAAYFQLAKSLHPDVTGNDESKAERFKHVSEAHSVLSDPQKRREYDASRPAESFRTYDTSGMSQHPYAATGGAPDLRA-RP---LYGINEEIWLAHHYG 116
BLAST of EWM25569.1 vs. NCBI_GenBank
Match: gi|301107426|ref|XP_002902795.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262097913|gb|EEY55965.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 83.5741 bits (205), Expect = 1.721e-16 Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 0
Query: 3 DYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGISRVSTFYRPGGS-HP----GGEGDIRAPRPPPDFKIFDHDEWNAWHYG 113
DYY +L V+R+++ +EIK AY A LHPDVTGN+E K FK ++EA+++LSD R++YD+ ++ G + HP GG D+RA RP + + W A+HYG
Sbjct: 5 DYYRVLNVARTSSFKEIKTAYFGLAKSLHPDVTGNDESKAERFKHVSEAHSVLSDPQKRREYDASRPAESFRSYDTSGTTQHPYVATGGAPDLRA-RP---LYGINEEIWLAYHYG 116
BLAST of EWM25569.1 vs. NCBI_GenBank
Match: gi|669146370|ref|XP_008608747.1| (hypothetical protein SDRG_04838 [Saprolegnia diclina VS20] >gi|530739572|gb|EQC37814.1| hypothetical protein SDRG_04838 [Saprolegnia diclina VS20]) HSP 1 Score: 78.9518 bits (193), Expect = 8.921e-15 Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 0
Query: 3 DYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGI-SRVSTFYRPGGSHPGGEGDIRAPRPPPDFKIFDHDEWNAWHYG 113
DYY ++ ++R+AT ++IK AY A +LHPDV GN+ +K +FK+++EA ++LSD R +YD++ R T Y P G+ RA P + D W A HYG
Sbjct: 17 DYYRVMNLTRNATQKDIKRAYLKLARQLHPDVNGNDLEKAALFKKVSEANSVLSDPAKRAEYDNRFSYRDRGETHYS-----PKGQTSARASAPRGSHYGINEDVWYAHHYG 123
BLAST of EWM25569.1 vs. NCBI_GenBank
Match: gi|813163647|ref|XP_012202884.1| (hypothetical protein SPRG_08251 [Saprolegnia parasitica CBS 223.65] >gi|641532417|gb|KDO26448.1| hypothetical protein SPRG_08251 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 78.1814 bits (191), Expect = 1.450e-14 Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 0
Query: 3 DYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGI-SRVSTFYRPGGSHPGGEGDIRAPRPPPDFKIFDHDEWNAWHYG 113
DYY ++ ++R+AT ++IK AY A +LHPDV GN+ +K +FK+++EA ++LSD R +YD++ R T Y P G+ RA P + D W A HYG
Sbjct: 2 DYYRVMNLTRNATQKDIKRAYLKLARQLHPDVNGNDLEKAALFKKVSEANSVLSDPAKRAEYDNRFSYRDRGETHYS-----PKGQTSARASAPRGSHYGINEDVWYAHHYG 108
BLAST of EWM25569.1 vs. NCBI_GenBank
Match: gi|926256862|ref|WP_053595128.1| (J domain-containing protein [Lysinibacillus sp. FJAT-14222] >gi|925211533|gb|KOS61850.1| molecular chaperone DnaJ [Lysinibacillus sp. FJAT-14222]) HSP 1 Score: 75.8702 bits (185), Expect = 4.271e-14 Identity = 42/112 (37.50%), Postives = 67/112 (59.82%), Query Frame = 0
Query: 1 MKDYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGISRVSTFYRPGGSHPGGEGDIRAPRPPPDFKIFDHDEWNAWHY 112
MK +Y L VSR AT ++IK+AY+ + K HPDV+G N++ +IF ++TEAY +L DQ +R+ YD++L + S + +H ++ PDF + D+ E N H+
Sbjct: 1 MKTHYETLGVSRDATQEQIKLAYRKLSKKHHPDVSGGNKESEKIFLEVTEAYKVLKDQASREAYDARLDGAGQS--WNDRQTHEKQSSRQQSTEKKPDFNM-DNIEKNFEHF 109
BLAST of EWM25569.1 vs. NCBI_GenBank
Match: gi|953501831|emb|CEG37280.1| (chaperone protein [Plasmopara halstedii]) HSP 1 Score: 77.0258 bits (188), Expect = 4.410e-14 Identity = 47/119 (39.50%), Postives = 69/119 (57.98%), Query Frame = 0
Query: 3 DYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGISRVSTFYRPGGS-----HP-GGEGDIRAPRPPPDFKIFDHDEWNAWHYGEG 115
DYY +L V+R+A+ +EIK AY A LHPDVTGN+ K F+ ++EA+++LS+ R++YD+ SR + +R + HP GD R P + I D + W A HYG+G
Sbjct: 5 DYYRVLNVARTASSKEIKAAYFQLAKSLHPDVTGNDVSKAERFRYVSEAHSVLSNPQKRREYDT----SRPANSFRSCDTSGMTQHPYATMGDGSDLRARPLYGI-DEEVWLAHHYGQG 118
BLAST of EWM25569.1 vs. NCBI_GenBank
Match: gi|653639740|ref|WP_027642865.1| (hypothetical protein [[Clostridium] clostridioforme]) HSP 1 Score: 75.485 bits (184), Expect = 5.305e-14 Identity = 51/149 (34.23%), Postives = 74/149 (49.66%), Query Frame = 0
Query: 1 MKDYYVILQVSRSATLQEIKVAYKNFALKLHPDVTGNNEDKTRIFKQLTEAYNILSDQDARQKYDSKLGISRVSTFYRPGGSHPGGEGDIRAPRPPPDFKIFDHDEWNAWHYGEGEGVHKEPFVKRRNPFMDIRPDNKGAQFFVRQKTK 149
MKDYY IL VS A ++IK AY+ A HPDV ++ DKT+ ++ EAY L D+ +R++YD +RV T + H G +P PD F+ + + G+G ++ R P I+P+ A FF RQ K
Sbjct: 1 MKDYYKILGVSEQAAEKDIKAAYRKLAKLYHPDVVKDDADKTQRMYEIQEAYQCLGDEASRKEYDK----ARVKTCSKDSNQHEQENG-----QPAPDMSQFER--FFGFQPGKGMETYQGNNNAARKPDGPIKPEEMFAAFFGRQNHK 138 The following BLAST results are available for this feature:
BLAST of EWM25569.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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