EWM25570.1, cds5101 (CDS) Nannochloropsis gaditana

Overview
NameEWM25570.1
Unique Namecds5101
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:158455..158726 -
Alignment locationCM002465.1:157792..158274 -

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Properties
Property NameValue
Start range157792
Start range.
Protein idEWM25570.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100463g1.3051.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:158455..158726 -
CM002465.1supercontigCM002465.1:157792..158274 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25570.1 vs. NCBI_GenBank
Match: gi|585107347|gb|EWM25570.1| (hypothetical protein Naga_100463g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 496.508 bits (1277), Expect = 2.178e-177
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0 
Query:    1 MSTTRHIPTLRDENAYGAHTLHKGNVANVDRPLKPVGASSSVIGPSGLTGGKIVARKALGSLSGSSLPSSHKTPGQEEDQTLIKQGLGNKVSKPRRALGEITNRVGPGHNSSGGGKDPYSMTSSSSSSSSSSSSSSSQKPTCRGKKGSTPGLSSGGPPSLSSSLLADLPTFSDEEEAGEEPGEVELAAGRLGVEEERLVALKRAARERAEEEQFLSSIKEGGRGPVDFGREDEEDAAFEREMQKLLLADMQG 252
            MSTTRHIPTLRDENAYGAHTLHKGNVANVDRPLKPVGASSSVIGPSGLTGGKIVARKALGSLSGSSLPSSHKTPGQEEDQTLIKQGLGNKVSKPRRALGEITNRVGPGHNSSGGGKDPYSMTSSSSSSSSSSSSSSSQKPTCRGKKGSTPGLSSGGPPSLSSSLLADLPTFSDEEEAGEEPGEVELAAGRLGVEEERLVALKRAARERAEEEQFLSSIKEGGRGPVDFGREDEEDAAFEREMQKLLLADMQG
Sbjct:    1 MSTTRHIPTLRDENAYGAHTLHKGNVANVDRPLKPVGASSSVIGPSGLTGGKIVARKALGSLSGSSLPSSHKTPGQEEDQTLIKQGLGNKVSKPRRALGEITNRVGPGHNSSGGGKDPYSMTSSSSSSSSSSSSSSSQKPTCRGKKGSTPGLSSGGPPSLSSSLLADLPTFSDEEEAGEEPGEVELAAGRLGVEEERLVALKRAARERAEEEQFLSSIKEGGRGPVDFGREDEEDAAFEREMQKLLLADMQG 252
The following BLAST results are available for this feature:
BLAST of EWM25570.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107347|gb|EWM25570.1|2.178e-177100.00hypothetical protein Naga_100463g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5113rna5113Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications