EWM25579.1, cds5093 (CDS) Nannochloropsis gaditana

Overview
NameEWM25579.1
Unique Namecds5093
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:136951..137012 -
Alignment locationCM002465.1:136443..136716 -

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Properties
Property NameValue
Protein idEWM25579.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101188g2.6427.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:136951..137012 -
CM002465.1supercontigCM002465.1:136443..136716 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM25579.1 vs. NCBI_GenBank
Match: gi|585107363|gb|EWM25579.1| (hypothetical protein Naga_101188g2 [Nannochloropsis gaditana])

HSP 1 Score: 225.328 bits (573), Expect = 1.386e-74
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
Query:    1 MGRLCGQTRGGHRDAGFPSQRCQGHARFSPGSGSSPTLCLHHQRGQERRRCWEDRHRSCQGGKRGAAPGGNVVVWGQGLERRRKKGAGVYMSGCIPTAKNQALFEEHPTKR 111
            MGRLCGQTRGGHRDAGFPSQRCQGHARFSPGSGSSPTLCLHHQRGQERRRCWEDRHRSCQGGKRGAAPGGNVVVWGQGLERRRKKGAGVYMSGCIPTAKNQALFEEHPTKR
Sbjct:    1 MGRLCGQTRGGHRDAGFPSQRCQGHARFSPGSGSSPTLCLHHQRGQERRRCWEDRHRSCQGGKRGAAPGGNVVVWGQGLERRRKKGAGVYMSGCIPTAKNQALFEEHPTKR 111          
BLAST of EWM25579.1 vs. NCBI_GenBank
Match: gi|585107364|gb|EWM25580.1| (hypothetical protein Naga_101188g2 [Nannochloropsis gaditana])

HSP 1 Score: 189.119 bits (479), Expect = 6.639e-60
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0
Query:   20 QRCQGHARFSPGSGSSPTLCLHHQRGQERRRCWEDRHRSCQGGKRGAAPGGNVVVWGQGLERRRKKGAGVYMSGCIPTAKNQALFEEHPTKR 111
            +RCQGHARFSPGSGSSPTLCLHHQRGQERRRCWEDRHRSCQGGKRGAAPGGNVVVWGQGLERRRKKGAGVYMSGCIPTAKNQALFEEHPTKR
Sbjct:   53 RRCQGHARFSPGSGSSPTLCLHHQRGQERRRCWEDRHRSCQGGKRGAAPGGNVVVWGQGLERRRKKGAGVYMSGCIPTAKNQALFEEHPTKR 144          
The following BLAST results are available for this feature:
BLAST of EWM25579.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585107363|gb|EWM25579.1|1.386e-74100.00hypothetical protein Naga_101188g2 [Nannochloropsi... [more]
gi|585107364|gb|EWM25580.1|6.639e-6098.91hypothetical protein Naga_101188g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5105rna5105Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications