EWM25585.1, cds5086 (CDS) Nannochloropsis gaditana

Overview
NameEWM25585.1
Unique Namecds5086
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:117226..117282 -
Alignment locationCM002465.1:116724..116984 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25585.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100377g4.7558.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:117226..117282 -
CM002465.1supercontigCM002465.1:116724..116984 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25585.1 vs. NCBI_GenBank
Match: gi|585107374|gb|EWM25585.1| (hypothetical protein Naga_100377g4 [Nannochloropsis gaditana])

HSP 1 Score: 202.986 bits (515), Expect = 5.640e-66
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 
Query:    1 MQSIARLLFFVACVMTLLTTSAAGSAHGHRELRGGFAGNVRRNNRAARAEMRSDAGGRRLENVEVMTTGVVHPHRVLRGGFAGNVRRNNRAARAAMRSDAGGRRL 105
            MQSIARLLFFVACVMTLLTTSAAGSAHGHRELRGGFAGNVRRNNRAARAEMRSDAGGRRLENVEVMTTGVVHPHRVLRGGFAGNVRRNNRAARAAMRSDAGGRRL
Sbjct:    1 MQSIARLLFFVACVMTLLTTSAAGSAHGHRELRGGFAGNVRRNNRAARAEMRSDAGGRRLENVEVMTTGVVHPHRVLRGGFAGNVRRNNRAARAAMRSDAGGRRL 105
The following BLAST results are available for this feature:
BLAST of EWM25585.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107374|gb|EWM25585.1|5.640e-66100.00hypothetical protein Naga_100377g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5098rna5098Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications