EWM25589.1, cds5083 (CDS) Nannochloropsis gaditana

Overview
NameEWM25589.1
Unique Namecds5083
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:103683..103870 -
Alignment locationCM002465.1:103428..103552 -
Alignment locationCM002465.1:103274..103320 -
Alignment locationCM002465.1:103091..103177 -
Alignment locationCM002465.1:102680..102805 -

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Properties
Property NameValue
Protein idEWM25589.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101029g2.3277.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:103683..103870 -
CM002465.1supercontigCM002465.1:103428..103552 -
CM002465.1supercontigCM002465.1:103274..103320 -
CM002465.1supercontigCM002465.1:103091..103177 -
CM002465.1supercontigCM002465.1:102680..102805 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25589.1 vs. NCBI_GenBank
Match: gi|585107381|gb|EWM25589.1| (hypothetical protein Naga_101029g2 [Nannochloropsis gaditana])

HSP 1 Score: 384.03 bits (985), Expect = 5.604e-135
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0 
Query:    1 MPSLLPLSCLMLLSLLGSCAFFLPARPSSSLISRSLFITSSPSLPTSSSALHARKKRPKEQDWMEVLAESGGMEEKEEGIWPAAPAPWEASFVGTSLDPLMLDPDDFDEEELGMMAMLNQEEEEEDLPVLEVEQVLDLSLGNMEYREDEDWEGEENSEKYRQARNRAKASSLHDTVVEHAGRFYEHYNGR 190
            MPSLLPLSCLMLLSLLGSCAFFLPARPSSSLISRSLFITSSPSLPTSSSALHARKKRPKEQDWMEVLAESGGMEEKEEGIWPAAPAPWEASFVGTSLDPLMLDPDDFDEEELGMMAMLNQEEEEEDLPVLEVEQVLDLSLGNMEYREDEDWEGEENSEKYRQARNRAKASSLHDTVVEHAGRFYEHYNGR
Sbjct:    1 MPSLLPLSCLMLLSLLGSCAFFLPARPSSSLISRSLFITSSPSLPTSSSALHARKKRPKEQDWMEVLAESGGMEEKEEGIWPAAPAPWEASFVGTSLDPLMLDPDDFDEEELGMMAMLNQEEEEEDLPVLEVEQVLDLSLGNMEYREDEDWEGEENSEKYRQARNRAKASSLHDTVVEHAGRFYEHYNGR 190
[Close]
BLAST of EWM25589.1 vs. NCBI_GenBank
Match: gi|585107382|gb|EWM25590.1| (hypothetical protein Naga_101029g2 [Nannochloropsis gaditana])

HSP 1 Score: 295.049 bits (754), Expect = 3.142e-100
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0 
Query:    1 MPSLLPLSCLMLLSLLGSCAFFLPARPSSSLISRSLFITSSPSLPTSSSALHARKKRPKEQDWMEVLAESGGMEEKEEGIWPAAPAPWEASFVGTSLDPLMLDPDDFDEEELGMMAMLNQEEEEEDLPVLEVEQVLDLSLGNMEYREDE 149
            MPSLLPLSCLMLLSLLGSCAFFLPARPSSSLISRSLFITSSPSLPTSSSALHARKKRPKEQDWMEVLAESGGMEEKEEGIWPAAPAPWEASFVGTSLDPLMLDPDDFDEEELGMMAMLNQEEEEEDLPVLEVEQVLDLSLGNMEYREDE
Sbjct:    1 MPSLLPLSCLMLLSLLGSCAFFLPARPSSSLISRSLFITSSPSLPTSSSALHARKKRPKEQDWMEVLAESGGMEEKEEGIWPAAPAPWEASFVGTSLDPLMLDPDDFDEEELGMMAMLNQEEEEEDLPVLEVEQVLDLSLGNMEYREDE 149
The following BLAST results are available for this feature:
BLAST of EWM25589.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585107381|gb|EWM25589.1|5.604e-135100.00hypothetical protein Naga_101029g2 [Nannochloropsi... [more]
gi|585107382|gb|EWM25590.1|3.142e-100100.00hypothetical protein Naga_101029g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5095rna5095Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications