EWM25592.1, cds5081 (CDS) Nannochloropsis gaditana

Overview
NameEWM25592.1
Unique Namecds5081
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:101976..102110 -
Alignment locationCM002465.1:101688..101753 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25592.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103055g1.7137.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:101976..102110 -
CM002465.1supercontigCM002465.1:101688..101753 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25592.1 vs. NCBI_GenBank
Match: gi|585107386|gb|EWM25592.1| (hypothetical protein Naga_103055g1 [Nannochloropsis gaditana])

HSP 1 Score: 135.576 bits (340), Expect = 1.867e-40
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:    1 MCAGIPRGGLGGLYQQRKVDTPEPAHAGGGARRGPTLCHAGPYHTALSRPYSSRTLWGSSRSFRHN 66
            MCAGIPRGGLGGLYQQRKVDTPEPAHAGGGARRGPTLCHAGPYHTALSRPYSSRTLWGSSRSFRHN
Sbjct:    1 MCAGIPRGGLGGLYQQRKVDTPEPAHAGGGARRGPTLCHAGPYHTALSRPYSSRTLWGSSRSFRHN 66
The following BLAST results are available for this feature:
BLAST of EWM25592.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107386|gb|EWM25592.1|1.867e-40100.00hypothetical protein Naga_103055g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5093rna5093Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications