EWM30176.1, cds508 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30176.1 vs. NCBI_GenBank
Match: gi|585112833|gb|EWM30176.1| (protein of unknown function DUF1084 [Nannochloropsis gaditana]) HSP 1 Score: 785.023 bits (2026), Expect = 0.000e+0 Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0
Query: 1 MPETVAEKVQDLVMACLFTLIAVVALVKCRRVIILEGAETAIKTFYFLIFGAAALRAVWFFIPSDVLEPSYAPAEVWAFQTPHWAGTLVSEILLSGGTLCLFAIFVLIIIYWADLLKKVFKPVRKHEPMTTFLSIMGSLAAFEVANFALFLAGIYSSQVMTLLDSIMLALVSMACVVEISIFSHRFRTVLTTLGAINQVPTDSQVRTIIWITVFGNVFFVLRAMVELFLAATFIALWRAHKPLSSLATPRNHFWDVYVLIKHSLELMILFLMLYTLQSRRTAHHHHVPPAHPVSHPQGIGAGSSLRSAAGGGGGSGSGASYLSMASTGNKPPNRSEYTEVKDLDAARGGRAGNGGRAPGFLSSGGGQGRPFAGGGIVKTAVRGTEMA 387
MPETVAEKVQDLVMACLFTLIAVVALVKCRRVIILEGAETAIKTFYFLIFGAAALRAVWFFIPSDVLEPSYAPAEVWAFQTPHWAGTLVSEILLSGGTLCLFAIFVLIIIYWADLLKKVFKPVRKHEPMTTFLSIMGSLAAFEVANFALFLAGIYSSQVMTLLDSIMLALVSMACVVEISIFSHRFRTVLTTLGAINQVPTDSQVRTIIWITVFGNVFFVLRAMVELFLAATFIALWRAHKPLSSLATPRNHFWDVYVLIKHSLELMILFLMLYTLQSRRTAHHHHVPPAHPVSHPQGIGAGSSLRSAAGGGGGSGSGASYLSMASTGNKPPNRSEYTEVKDLDAARGGRAGNGGRAPGFLSSGGGQGRPFAGGGIVKTAVRGTEMA
Sbjct: 1 MPETVAEKVQDLVMACLFTLIAVVALVKCRRVIILEGAETAIKTFYFLIFGAAALRAVWFFIPSDVLEPSYAPAEVWAFQTPHWAGTLVSEILLSGGTLCLFAIFVLIIIYWADLLKKVFKPVRKHEPMTTFLSIMGSLAAFEVANFALFLAGIYSSQVMTLLDSIMLALVSMACVVEISIFSHRFRTVLTTLGAINQVPTDSQVRTIIWITVFGNVFFVLRAMVELFLAATFIALWRAHKPLSSLATPRNHFWDVYVLIKHSLELMILFLMLYTLQSRRTAHHHHVPPAHPVSHPQGIGAGSSLRSAAGGGGGSGSGASYLSMASTGNKPPNRSEYTEVKDLDAARGGRAGNGGRAPGFLSSGGGQGRPFAGGGIVKTAVRGTEMA 387
BLAST of EWM30176.1 vs. NCBI_GenBank
Match: gi|1210529723|dbj|GAX11817.1| (hypothetical protein FisN_7Lh205 [Fistulifera solaris]) HSP 1 Score: 245.358 bits (625), Expect = 4.171e-75 Identity = 130/297 (43.77%), Postives = 197/297 (66.33%), Query Frame = 0
Query: 4 TVAEKVQDLVMACLFTLIAVVALVKCRRVIILE------GAETAIKT-FYFLIFGAAALRAVWFFIPSDVLEPSYAPAEVWAFQTPH--WAGTLVSEILLSGGTLCLFAIFVLIIIYWADLLKKVFKP-VRKHEPMTTFLSIMGSLAAFEVANFALFLAGIYSSQVMTLLDSIMLALVSMACVVEISIFSHRFRTVLTTLGAINQVPTDSQVRTIIWITVFGNVFFVLRAMVELFLAATFIALWRAHKPLSSLATPRNHFWDVYVLIKHSLELMILFLMLYTLQSRRTAHHHHVPPA 290
T EK D+V+ F A+V+ ++ R+ + GAET + T FY LIF A++LRA+WF +P V +PSY P+ V+A+ H W G+ +SEI+++ G+L LF+IF+LI++YWAD+LKK F+P ++ P T F+S++ +LAAF + N FLA Y+++ M L +++LA+VS+ CV EI+IFS +F+TV+ TLG+INQV TD QVR I+WIT+ GN+FF+ RA++E+ AA + W+ + + + + +WD+Y +K+S E+ IL LMLY LQSR A V A
Sbjct: 22 TTFEKGMDIVLGVCFFATALVSYIR-RKASYQQSNSPSAGAETMVITAFYSLIFLASSLRAIWFLVPESVWQPSYTPSAVYAWDNDHPSWLGSALSEIIITAGSLALFSIFILILVYWADILKKYFQPGSQRTSPKTIFVSLVTTLAAFMILNVLAFLAKFYTTEGMILFHAVLLAVVSLVCVCEITIFSQKFQTVIKTLGSINQVSTDVQVRRILWITITGNLFFITRALLEIVFAANLLLFWKENGTVGKAFS--HEWWDIYTALKYSSEVTILALMLYILQSRFHAAASAVSNA 315
BLAST of EWM30176.1 vs. NCBI_GenBank
Match: gi|1210520453|dbj|GAX20884.1| (hypothetical protein FisN_7Hh205 [Fistulifera solaris]) HSP 1 Score: 243.432 bits (620), Expect = 2.755e-74 Identity = 126/286 (44.06%), Postives = 193/286 (67.48%), Query Frame = 0
Query: 4 TVAEKVQDLVMACLFTLIAVVALVKCRRVIILE------GAETAIKT-FYFLIFGAAALRAVWFFIPSDVLEPSYAPAEVWAFQTPH--WAGTLVSEILLSGGTLCLFAIFVLIIIYWADLLKKVFKP-VRKHEPMTTFLSIMGSLAAFEVANFALFLAGIYSSQVMTLLDSIMLALVSMACVVEISIFSHRFRTVLTTLGAINQVPTDSQVRTIIWITVFGNVFFVLRAMVELFLAATFIALWRAHKPLSSLATPRNHFWDVYVLIKHSLELMILFLMLYTLQSR 279
T EK D+V+ F A+V+ ++ R+ + GAET + T FY LIF A++LRA+WF +P V +PSY P+ V+A+ H W G+ +SEI+++ G+L LF+IF+LI++YWAD+LKK F+P ++ P T F+S++ +LAA + N FLA Y+++ M L +++LA+VS+ CV EI+IFS +F+TV+ TLG+INQV TD QVR I+WIT+ GN+FF+ RA++E+ AA + W+ + + + + +WD+Y +K+S E+ IL LMLY LQSR
Sbjct: 22 TAFEKGMDIVLGVCFLATALVSYIR-RKASYQQSNSPSAGAETVVITAFYSLIFLASSLRAIWFLVPESVWQPSYTPSAVYAWDNEHPSWLGSALSEIIITAGSLALFSIFILILVYWADILKKYFQPGSQRTSPRTIFVSLVTTLAALMILNVLAFLAKFYTTEGMILFHAVLLAVVSLVCVCEITIFSQKFQTVIKTLGSINQVSTDVQVRRILWITITGNLFFITRALLEIVFAANLLLFWKENGTVGKAFS--HEWWDIYTALKYSSEVTILALMLYILQSR 304
BLAST of EWM30176.1 vs. NCBI_GenBank
Match: gi|219128559|ref|XP_002184477.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403927|gb|EEC43876.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 236.498 bits (602), Expect = 4.211e-71 Identity = 128/300 (42.67%), Postives = 182/300 (60.67%), Query Frame = 0
Query: 3 ETVAEKVQDLVMACLFTLIAVVALVKCRRVIILE-------------------GAETAIKT-FYFLIFGAAALRAVWFFIPSDVLEPSYAPAEVWAFQTPH--WAGTLVSEILLSGGTLCLFAIFVLIIIYWADLLKKVFKP-VRKHEPMTTFLSIMGSLAAFEVANFALFLAGIYSSQVMTLLDSIMLALVSMACVVEISIFSHRFRTVLTTLGAINQVPTDSQVRTIIWITVFGNVFFVLRAMVELFLAATFIALWRAHKPLSSLATPRNHFWDVYVLIKHSLELMILFLMLYTLQSR 279
ET E D+V+ LF L A+VA RR+ L GAE + T FY LI + LRA WF IP+ +PSY P V+A+ H W G ++SE++++ G++ LFAIF+LI++YWAD+L+K F P R+ PM +F++ + L A E N FL +Y+++ M L+++++LA+VS+ CV I+ FSHRFRTVL TLGAINQV TDSQVR I+WITV GN FF RA +E + A + W H ++ + + + +WD+Y ++K+ E IL LM Y LQSR
Sbjct: 45 ETTVEIYLDIVLGVLFLLTAIVA---ARRMSTLRRQPQQSNSSSSSSTSSSTGGAERVVITAFYSLILLTSVLRATWFLIPASTWQPSYVPVAVYAWDAAHPSWVGAMLSEVVVTAGSIALFAIFILILVYWADILEKYFHPGSRRSVPMVSFITRLTVLLAAEAINIGCFLCQLYTTEGMVLVNAVLLAIVSVVCVCRITFFSHRFRTVLKTLGAINQVSTDSQVRRIVWITVTGNAFFFTRAFLESYFCAVLVRYWHTHGTVAKVFS--HTWWDIYTVVKYGSEWTILALMFYILQSR 339
BLAST of EWM30176.1 vs. NCBI_GenBank
Match: gi|397646388|gb|EJK77249.1| (hypothetical protein THAOC_00931 [Thalassiosira oceanica]) HSP 1 Score: 222.246 bits (565), Expect = 1.532e-66 Identity = 127/249 (51.00%), Postives = 164/249 (65.86%), Query Frame = 0
Query: 37 GAETAIKT-FYFLIFGAAALRAVWFFIPSDVLEPSYAPAEVWAFQTPHWAGTLVSEILLSG-GTLCLFAIFVLIIIYWADLLKKVFKP-VRKHEPMTTFLSIMGSLAAFEVANFALFLAGIYSSQVMTLLDSIMLALVSMACVVEISIFSHRFRTVLTTLGAINQVPTDSQVRTIIWITVFGNVFFVLRAMVELFLAATFIALWRAHKPLSSLATPRNHFWDVYVLIKHSLELMILFLMLYTLQSRRTA 282
GAET + T FY LI ++LR+VWF IP+ V P Y P V AF G EI+L G G+LCLF+IF+LI++YWAD+LKK F P R+ +PM TFL ++ L A ++ N LFL YSS+ M L++SI ++LVS+ CV EI+IFSHRFRTVL TLG +NQV T++QV+ IIWITV GN+FF RA +E A I W H+ + + WD Y+L+KH EL IL LMLY LQSR T+
Sbjct: 16 GAETTVVTAFYSLILLTSSLRSVWFLIPASVWSPYYTPHAVMAFDPGEQWGLKFLEIVLMGLGSLCLFSIFILILVYWADILKKYFYPGARRSKPMVTFLLLVAVLLAIQLLNATLFLCRRYSSEGMILVNSITMSLVSIVCVCEITIFSHRFRTVLKTLGDLNQVSTETQVKRIIWITVTGNIFFFTRAFLETTFAIVLIIYW--HRTGTVAEVFSHATWDSYILLKHWSELAILALMLYILQSRFTS 262
BLAST of EWM30176.1 vs. NCBI_GenBank
Match: gi|299116999|emb|CBN73770.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 215.698 bits (548), Expect = 1.919e-63 Identity = 137/332 (41.27%), Postives = 186/332 (56.02%), Query Frame = 0
Query: 37 GAETAIKTFYFLIFGAAALRAVWFFIPSDVLEPSYAPAEVWAFQTPHWAGTLVSEILLSGGTLCLFAIFVLIIIYWADLLKKVFKPV-RKHEPMTTFLSIMGSLAAFEVANFALFLAGIYSSQVMTLLDSIMLALVSMACVVEISIFSHRFRTVLTTLGAINQVPTDSQVRTIIWITVFGNVFFVLRAMVELFLAATFIALWRAHKPLSSLATPRNHFWDVYVLIKHSLELMILFLMLYTLQSRRTAHHHHVPPAHPVSHPQGIGAGSSLRSAAGGGGGSGSGASYLSMASTGNKPPNRSEYTEVKDLDAARGGRAGN--GGRAPGFLSSGG 365
G+E I TFY LI + +RA WF IP++VL+P+YAP+ +AF+ W GT VSE++L G+L LF+IF+L+ I+WADLLK +FK R PM +F+++ +LAA E N LF +YSSQ M + +S +L ++S+ C VEIS FSHRFRTVL TLGA+NQ+ TD QV I+ ITV GNVFF +RA+ EL + T ++ + + + + WD YV++KH E MILF+ML+ L PA GSSL S G S G EY E+ R G A + GG A L+ G
Sbjct: 39 GSEAVITTFYSLILFTSVVRATWFLIPTEVLQPTYAPSTEYAFK-GDWLGTYVSEVMLFVGSLSLFSIFILMAIFWADLLKGIFKESGRPSRPMASFMTVAAALAAAEGVNSCLFFTRVYSSQGMLMFESALLCMLSLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQVTRIVRITVTGNVFFAIRAVCELAVGLTLYMHFKQTHSFNMVFS--SWVWDWYVVVKHVSEWMILFVMLWILHD----------PAE---------GGSSLGSDEG---------------SQGLAAAEDPEYWEIPPEADGRKGCADDDTGGDATSQLTGNG 333
BLAST of EWM30176.1 vs. NCBI_GenBank
Match: gi|223997432|ref|XP_002288389.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975497|gb|EED93825.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 141.739 bits (356), Expect = 1.396e-35 Identity = 99/288 (34.38%), Postives = 139/288 (48.26%), Query Frame = 0
Query: 1 MPETVAEKVQDLVMACLFTLIAVVALVKCRRVIILEGAETAIKT-FYFLIFGAAALRAVWFFIPSDVLEPSYAPAEVWAFQT--PHWAGTLVSEILLSGGTLCLFAIFVLIIIYWADLLKKVFKP-VRKHEPMTTFL-SIMGSLAAFEVANFALFLAGIYSSQVMTLLDSIMLALVSMACVVEISIFSHRFRTVLTTLGAINQVPTDSQVRTIIWITVFGNVFFVLRAMVELFLAATFIALWRAHKPLSSLATPRNHFWDVYVLIKHSLELMILFLMLYTLQSRRTAH 283
+PET E D V+ F + A++A + GAET + T FY LI A+LR +WF +P V +Y P V AF + P W + +L+ G+LCLF+IF+LI++YWAD+LKK F P R+ +PM TFL +++ +L A +QV T +SQV+ I+WITV GN+FF RA +E + W HK + + WD Y+L+KH EL+IL LMLY LQSR A+
Sbjct: 28 IPETGFEFYSDAVLGFGFLVTAILAAKRMSSSRSQGGAETTVVTAFYSLILLTASLRTIWFIVPGTVWSTNYTPHAVMAFDSANPDWLMQFLEILLVGAGSLCLFSIFILILVYWADILKKYFYPGARRSKPMLTFLVTVLKTLGAI--------------NQVST----------------------------------------ESQVKRIVWITVTGNLFFFTRAFLETIFTILLVIYW--HKNGTVAEVFSHALWDTYILLKHWSELVILALMLYILQSRFAAN 259
BLAST of EWM30176.1 vs. NCBI_GenBank
Match: gi|1072231341|gb|OEU16073.1| (hypothetical protein FRACYDRAFT_275247 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 132.88 bits (333), Expect = 1.347e-32 Identity = 95/284 (33.45%), Postives = 129/284 (45.42%), Query Frame = 0
Query: 1 MPETVAEKVQDLVMACLFTLIAVVALVKCRRVIILEGAETAIKT-FYFLIFGAAALRAVWFFIPSDVLEPSYAPAEV--WAFQTPHWAGTLVSEILLSGGTLCLFAIFVLIIIYWADLLKKVFKPV-RKHEPMTTFLSIMGSLAAFEVANFALFLAGIYSSQVMTLLDSIMLALVSMACVVEISIFSHRFRTVLTTLGAINQVPTDSQVRTIIWITVFGNVFFVLRAMVELFLAATFIALWRAHKPLSSLATPRNH-FWDVYVLIKHSLELMILFLMLYTLQSR 279
M T E+ DLV F + A+ A + GAET + T FY LI + RA+WF IP+ V P Y P + W P W G +SE +L+ G+L LF+IF+LI++YWAD+LKK F P R+ PM TFL + ++ + ++S S R V WITV GN+FF RA +E I W+ + ++A +H +WD YV IK S E+ IL LMLY LQSR
Sbjct: 1 MDVTTFERGLDLVFGVAFLITAIFAAKRMSWTHQQVGAETTVVTAFYALILVTSVFRAIWFLIPATVWTPQYTPVAILAWDKDHPAWLGAFLSEFVLTAGSLALFSIFILILVYWADILKKYFHPASRRSIPMVTFLGL------------------------------------TLGAINQVSTDSQVKRIV--------------------WITVTGNLFFFTRAFLEAVFCGYLIVYWKEER---TVARSFSHVWWDTYVGIKFSSEVTILSLMLYILQSR 225
BLAST of EWM30176.1 vs. NCBI_GenBank
Match: gi|1214711335|gb|OWZ22353.1| (hypothetical protein PHMEG_0002942 [Phytophthora megakarya]) HSP 1 Score: 112.079 bits (279), Expect = 2.747e-24 Identity = 74/280 (26.43%), Postives = 141/280 (50.36%), Query Frame = 0
Query: 39 ETAIKTFYFLIFGAAALRAVWFFIPSDVLEPSYAPAEVWAFQTPHWAGTLVSEILLSGGTLCLFAIFVLIIIYWADLLKKVF--KPVRKHEPMTTFLSIMGSLAAFEVANFALFLAGIYSSQVMTLLDSIMLALVSMACVVEISIFSHRFRTVLTTLGAINQVPTDSQVRTIIWITVFGNVFFVLRAMVELFLAATFIALWRAHKPLSSLATPRNHFWDVYVLIKHSLELMILFLMLYTLQSRRTAHHHHVPPAH-PV--------SHPQGIGAGSSLRS 307
+ A FY L+ A+ R VWF P V P ++ WA L++E + G+ L+++FVLI+++WAD+L+++F + VR H P+ F ++G+L A + FA+F A S + + D +++ ++S+ + + ++S R +TVL ++Q+ T +++ + W T F + + FL + ++L H+ + L + +W ++V KH +E+ +L+ +LYTL + + + + P+ P GI SL S
Sbjct: 58 QAATLGFYLLMGLASLTRVVWFATPYGVQSVLVEPPQI-VMGDDGWAQFLLAEAVELLGSFLLYSVFVLIVVFWADMLRRLFTHESVRSH-PLRLFFFVLGALVAIQAIGFAVFAAKKVDSYWLMIYDDVVMCMLSVGSLAAVLVYSFRMKTVLQAFLEVSQIDTTDRIKAVNWATSICAFFLISNTV---FLTYSIVSLAHFHQAGAYL---ESKWWWLFVASKHLVEIFVLYFLLYTLWGKSSDDAENSKDGYEPIPDGTYLDDDDPNGINTSGSLPS 329
BLAST of EWM30176.1 vs. NCBI_GenBank
Match: gi|953500481|emb|CEG38190.1| (hypothetical protein PHALS_08277 [Plasmopara halstedii]) HSP 1 Score: 110.923 bits (276), Expect = 7.196e-24 Identity = 68/245 (27.76%), Postives = 133/245 (54.29%), Query Frame = 0
Query: 39 ETAIKTFYFLIFGAAALRAVWFFIPSDVLEPSYAPAEVWAFQTPHWAGTLVSEILLSGGTLCLFAIFVLIIIYWADLLKKVF--KPVRKHEPMTTFLSIMGSLAAFEVANFALFLAGIYSSQVMTLLDSIMLALVSMACVVEISIFSHRFRTVLTTLGAINQVPTDSQVRTIIWITVFGNVFFVLRAMVELFLAATFIALWRAHKPLSSLATPRNHFWDVYVLIKHSLELMILFLMLYTLQSRRT 281
+ A FY L+ A+ R +WF P V P + WA L++E + G+ L+++FVLI+++WAD+L+++F + VR H P+ F S++G++ A + FA+F A S + + D +++ L+S+ + + ++S R +TVL ++Q+ T ++R + W T F + + +FL + ++L H+ L ++ +W ++V +KH +E+ +L+ +LYTL + +
Sbjct: 58 QAATLGFYLLMGLASLTRVLWFATPFGVHSVLVEPPRI-MMGDNGWAQFLLAEAVELLGSYLLYSVFVLIVVFWADMLRRLFTHESVRSH-PLRVFFSLLGAILAIQTMGFAVFAAKKEDSYWLLVYDDVVMCLLSVGSLAAVLVYSFRMKTVLQAFLEVSQIDTTDRIRAVNWATFICTFFLIANS---IFLTYSIVSLAHFHQAGVYL---KSTWWWLFVALKHLVEIFVLYFLLYTLWGKSS 294 The following BLAST results are available for this feature:
BLAST of EWM30176.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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