EWM25602.1, cds5071 (CDS) Nannochloropsis gaditana

Overview
NameEWM25602.1
Unique Namecds5071
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:75394..76887 -

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Properties
Property NameValue
Protein idEWM25602.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100936g2.9424.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:75394..76887 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM25602.1 vs. NCBI_GenBank
Match: gi|585107411|gb|EWM25602.1| (hypothetical protein Naga_100936g2 [Nannochloropsis gaditana])

HSP 1 Score: 997.268 bits (2577), Expect = 0.000e+0
Identity = 497/497 (100.00%), Postives = 497/497 (100.00%), Query Frame = 0 
Query:    1 MDCISLSHLSVPPRPSRPFLQVFSILILGSGVCLGSALLLLDQIQRGLPSPYPAIFTNTTLSDVGRVLRQHDSTSTTQLVSLLDTRVIPLLHSSVSWLSDILTQLHYWLIRMDRGEMENMWAFTTSMLHYDKRWEESSDDKGGAGGYGKMMEVGQFMRTTHMQYKNQVPLWLDEAFWLALRVLAVFLVIGAMRWGHQEQEDSKTGEDSGRARDANDTSQCIALKDDPFQIKERNSGLTRSLPPNPGPAGGMPLSPSLSPPPPSPPRPPLSPPSPSPTQSSLHLPPQKSLRLPAKVLAAFLFAFGFALGGGLLCLDVGSREMTITQFSSSSSSSSSPSSSSFSSFSSPSVLSLRSSSFTFSSLSSSFFLSSSFLSSFSHSSKDEQTDALCPPLTIATSLMDLEGKEERQSSNISWFAHVYHRWQGPQGGRGSPSFPPLPSTSSLTSSAQAFFIRSWRGSGEGGGKEGRKEGRKEGGKRRGGRDRIRCRRCCLRKELCR 497
            MDCISLSHLSVPPRPSRPFLQVFSILILGSGVCLGSALLLLDQIQRGLPSPYPAIFTNTTLSDVGRVLRQHDSTSTTQLVSLLDTRVIPLLHSSVSWLSDILTQLHYWLIRMDRGEMENMWAFTTSMLHYDKRWEESSDDKGGAGGYGKMMEVGQFMRTTHMQYKNQVPLWLDEAFWLALRVLAVFLVIGAMRWGHQEQEDSKTGEDSGRARDANDTSQCIALKDDPFQIKERNSGLTRSLPPNPGPAGGMPLSPSLSPPPPSPPRPPLSPPSPSPTQSSLHLPPQKSLRLPAKVLAAFLFAFGFALGGGLLCLDVGSREMTITQFSSSSSSSSSPSSSSFSSFSSPSVLSLRSSSFTFSSLSSSFFLSSSFLSSFSHSSKDEQTDALCPPLTIATSLMDLEGKEERQSSNISWFAHVYHRWQGPQGGRGSPSFPPLPSTSSLTSSAQAFFIRSWRGSGEGGGKEGRKEGRKEGGKRRGGRDRIRCRRCCLRKELCR
Sbjct:    1 MDCISLSHLSVPPRPSRPFLQVFSILILGSGVCLGSALLLLDQIQRGLPSPYPAIFTNTTLSDVGRVLRQHDSTSTTQLVSLLDTRVIPLLHSSVSWLSDILTQLHYWLIRMDRGEMENMWAFTTSMLHYDKRWEESSDDKGGAGGYGKMMEVGQFMRTTHMQYKNQVPLWLDEAFWLALRVLAVFLVIGAMRWGHQEQEDSKTGEDSGRARDANDTSQCIALKDDPFQIKERNSGLTRSLPPNPGPAGGMPLSPSLSPPPPSPPRPPLSPPSPSPTQSSLHLPPQKSLRLPAKVLAAFLFAFGFALGGGLLCLDVGSREMTITQFSSSSSSSSSPSSSSFSSFSSPSVLSLRSSSFTFSSLSSSFFLSSSFLSSFSHSSKDEQTDALCPPLTIATSLMDLEGKEERQSSNISWFAHVYHRWQGPQGGRGSPSFPPLPSTSSLTSSAQAFFIRSWRGSGEGGGKEGRKEGRKEGGKRRGGRDRIRCRRCCLRKELCR 497
The following BLAST results are available for this feature:
BLAST of EWM25602.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107411|gb|EWM25602.1|0.000e+0100.00hypothetical protein Naga_100936g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5083rna5083Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications