EWM25604.1, cds5069 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25604.1 vs. NCBI_GenBank
Match: gi|585107416|gb|EWM25604.1| (nitrogen assimilation regulatory protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 541.962 bits (1395), Expect = 0.000e+0 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0
Query: 1 SLPPSNNLFETVPWLRQFLRDIDWPHGLNNGFTRYIFPIYLAGLFLGPQDRDHNVLLQLFWSWWWPAIMVIYPVLGRIWCSVCPFMIYGEWAQETLKKVFPTFKLKKWPQFITQKWGPWFLYGLFVAILYWEELWDLPQNAALSAWLLLLITGGAVVTSLQYEKRLWCASLCPIGGMNGMFAKLSLLSVRTEPGLCQSCGQYLCINNEKNNKPGMPVYILESRFSFGRRDTGLWMLPSMYMYSWIRCLPGDSLSLLPREKREGRRK 266
SLPPSNNLFETVPWLRQFLRDIDWPHGLNNGFTRYIFPIYLAGLFLGPQDRDHNVLLQLFWSWWWPAIMVIYPVLGRIWCSVCPFMIYGEWAQETLKKVFPTFKLKKWPQFITQKWGPWFLYGLFVAILYWEELWDLPQNAALSAWLLLLITGGAVVTSLQYEKRLWCASLCPIGGMNGMFAKLSLLSVRTEPGLCQSCGQYLCINNEKNNKPGMPVYILESRFSFGRRDTGLWMLPSMYMYSWIRCLPGDSLSLLPREKREGRRK
Sbjct: 1 SLPPSNNLFETVPWLRQFLRDIDWPHGLNNGFTRYIFPIYLAGLFLGPQDRDHNVLLQLFWSWWWPAIMVIYPVLGRIWCSVCPFMIYGEWAQETLKKVFPTFKLKKWPQFITQKWGPWFLYGLFVAILYWEELWDLPQNAALSAWLLLLITGGAVVTSLQYEKRLWCASLCPIGGMNGMFAKLSLLSVRTEPGLCQSCGQYLCINNEKNNKPGMPVYILESRFSFGRRDTGLWMLPSMYMYSWIRCLPGDSLSLLPREKREGRRK 266
BLAST of EWM25604.1 vs. NCBI_GenBank
Match: gi|504973094|ref|WP_015160196.1| (transcriptional regulator [Chamaesiphon minutus] >gi|428017959|gb|AFY94053.1| transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Chamaesiphon minutus PCC 6605]) HSP 1 Score: 241.506 bits (615), Expect = 1.842e-70 Identity = 118/218 (54.13%), Postives = 148/218 (67.89%), Query Frame = 0
Query: 7 NLFETVPWLRQFLRDIDWPHGLNNGFTRYIFPIYLAGLFLGPQDRDHNVLLQLFWSWWWPAIMVIYPVLGRIWCSVCPFMIYGEWAQETLKKVFPTFKLKKWPQFITQKWGPWFLYGLFVAILYWEELWDLPQNAALSAWLLLLITGGAVVTSLQYEKRLWCASLCPIGGMNGMFAKLSLLSVRTEPGLCQS-CGQYLCIN-----NEKNNKPGMPVY 218
NL P LRQFL +P +N GFT ++FPI +A LFL PQDR HN L LFW+WWWP I++++P++GR+WC+ CPFMIYGE Q+ K FP LKKWP+ +KWG WFL+GLFV I WEELW+L A LS+WLLLLITGGAV+ SL +E+R WC LCPIGGMNG+FAKLS++ +R + G C + C Y C E G P+Y
Sbjct: 402 NLLNAYPRLRQFLNSDWYPDRINYGFTAWVFPIVVAILFLAPQDRQHNFALNLFWAWWWPLILLLFPIIGRLWCAFCPFMIYGEIVQKLSLKFFPR-TLKKWPRETAEKWGGWFLFGLFVLIFLWEELWNLENTAYLSSWLLLLITGGAVLFSLIFERRFWCRYLCPIGGMNGLFAKLSIVELRAQQGTCAAECTTYHCYKGGVGFGEGQTTNGCPIY 618
BLAST of EWM25604.1 vs. NCBI_GenBank
Match: gi|1027791482|ref|WP_063718157.1| (AAA family ATPase, partial [Leptolyngbya valderiana] >gi|1025910801|gb|OAB59494.1| AAA family ATPase, partial [Leptolyngbya valderiana BDU 20041]) HSP 1 Score: 238.81 bits (608), Expect = 1.820e-69 Identity = 115/218 (52.75%), Postives = 149/218 (68.35%), Query Frame = 0
Query: 7 NLFETVPWLRQFLRDIDWPHGLNNGFTRYIFPIYLAGLFLGPQDRDHNVLLQLFWSWWWPAIMVIYPVLGRIWCSVCPFMIYGEWAQETLKKVFPTFKLKKWPQFITQKWGPWFLYGLFVAILYWEELWDLPQNAALSAWLLLLITGGAVVTSLQYEKRLWCASLCPIGGMNGMFAKLSLLSVRTEPGLCQS-CGQYLCI-----NNEKNNKPGMPVY 218
NLF+ P LRQFLR WP GLN G T ++F + + LF+GPQ RD NV L LFW+WWWP +++ +P +GR+WC+VCPFMIYGE Q+ K+FP L++WP+ ++WG WFL+GLFV I WEELW+L A LS+ LLLLIT GAV+ SL +E+R WC LCPIGGMNG+FAKLS+ +R +PG+C + C Y C E G P+Y
Sbjct: 398 NLFKAYPRLRQFLRSRFWPDGLNYGITTWLFALVVILLFVGPQTRDRNVALNLFWAWWWPLVLIGFPFVGRLWCAVCPFMIYGELTQKLSLKLFPR-TLRRWPRESAERWGGWFLFGLFVLIFLWEELWNLENTAYLSSCLLLLITAGAVIFSLIFERRFWCRYLCPIGGMNGLFAKLSMTELRAQPGICSAECTTYQCYKGGPRKGEGQETEGCPLY 614
BLAST of EWM25604.1 vs. NCBI_GenBank
Match: gi|515875704|ref|WP_017306287.1| (hypothetical protein [Spirulina subsalsa]) HSP 1 Score: 236.113 bits (601), Expect = 3.589e-69 Identity = 115/228 (50.44%), Postives = 152/228 (66.67%), Query Frame = 0
Query: 7 NLFETVPWLRQFLRDIDWPHGLNNGFTRYIFPIYLAGLFLGPQDRDHNVLLQLFWSWWWPAIMVIYPVLGRIWCSVCPFMIYGEWAQETLKKVFPTFKLKKWPQFITQKWGPWFLYGLFVAILYWEELWDLPQNAALSAWLLLLITGGAVVTSLQYEKRLWCASLCPIGGMNGMFAKLSLLSVRTEPGLCQS-CGQYLC-----INNEKNNKPGMPVYILESRFSFGR 228
NL +T P LR FL+ WP GLN G T ++F + + LF+GPQ RD NV L LFW+WWWP +++ +P++GR+WC+VCPFMIYGE Q+ K++P +LK WP+ ++WG WFL+GLF I WEELWDLP A LS+ LLLLITGGAV+ SL +E+R WC LCPIGGMNG+FAKLS+ +R + G+C + C Y C E G P+Y ++ R
Sbjct: 286 NLLKTYPQLRAFLKSKFWPEGLNYGITTWVFALVVIMLFVGPQTRDQNVALNLFWAWWWPLVLLGFPLVGRLWCAVCPFMIYGELTQKLSLKLWPR-ELKPWPRQTAERWGGWFLFGLFALIFLWEELWDLPNTAYLSSCLLLLITGGAVICSLLFERRFWCRYLCPIGGMNGLFAKLSITELRAQTGICAAECTTYQCYKGGPAKGEGQETAGCPLYSHPAQLQDNR 512
BLAST of EWM25604.1 vs. NCBI_GenBank
Match: gi|428686165|gb|AFZ46025.1| (nitrogen assimilation regulatory protein [Cyanobacterium stanieri PCC 7202]) HSP 1 Score: 234.187 bits (596), Expect = 7.586e-68 Identity = 112/218 (51.38%), Postives = 141/218 (64.68%), Query Frame = 0
Query: 7 NLFETVPWLRQFLRDIDWPHGLNNGFTRYIFPIYLAGLFLGPQDRDHNVLLQLFWSWWWPAIMVIYPVLGRIWCSVCPFMIYGEWAQETLKKVFPTFKLKKWPQFITQKWGPWFLYGLFVAILYWEELWDLPQNAALSAWLLLLITGGAVVTSLQYEKRLWCASLCPIGGMNGMFAKLSLLSVRTEPGLCQS-CGQYLCI-----NNEKNNKPGMPVY 218
NL P R FLR WP +N GFT +F + + LF+GPQ RD N L LFW+WWWP I+V +P +GR+WCSVCPFMIYGE Q+ + +FP ++LKKWP+ +KWG WFL+ F IL WEELWDLP A LS+ LLLLIT GA++ S +E+R WC LCPIGGMNGMFAKL++ +R + G C + C Y C E G P+Y
Sbjct: 398 NLLTAYPRFRHFLRSPWWPDRINYGFTLTVFALVVIILFVGPQTRDQNFALNLFWAWWWPLILVAFPFVGRLWCSVCPFMIYGEVTQKLTQTLFPNYQLKKWPRKTAEKWGGWFLFTGFALILLWEELWDLPNTAYLSSCLLLLITAGAMICSAIFERRFWCRYLCPIGGMNGMFAKLAMTELRAQQGTCSAECNTYQCYKGGPEKGEGQETNGCPLY 615
BLAST of EWM25604.1 vs. NCBI_GenBank
Match: gi|504986496|ref|WP_015173598.1| (cyclic nucleotide-binding protein [Geitlerinema sp. PCC 7407] >gi|427986890|gb|AFY68034.1| cyclic nucleotide-binding protein [Geitlerinema sp. PCC 7407]) HSP 1 Score: 233.802 bits (595), Expect = 1.148e-67 Identity = 119/228 (52.19%), Postives = 149/228 (65.35%), Query Frame = 0
Query: 7 NLFETVPWLRQFLRDIDWPHGLNNGFTRYIFPIYLAGLFLGPQDRDHNVLLQLFWSWWWPAIMVIYPVLGRIWCSVCPFMIYGEWAQETLKKVFPTFKLKKWPQFITQKWGPWFLYGLFVAILYWEELWDLPQNAALSAWLLLLITGGAVVTSLQYEKRLWCASLCPIGGMNGMFAKLSLLSVRTEPGLCQ-SCGQYLCI-----NNEKNNKPGMPVYILESRFSFGR 228
NL T P LR+FLR WP LN GFT +F + +A L LGPQ RD NV L LFW+WWWP +++ +P +GR+WC+VCPFMIYGE Q+ K+FP L WP+ + KWG WFL+GLFV IL WEELW+L A LSA LLLLIT GAV+ S +E+R WC LCPIGGMNG+FAKLS++ +R + G+C SC Y C E G PVY ++ + R
Sbjct: 405 NLLNTYPALRRFLRSPWWPDRLNYGFTLTVFALVVAVLILGPQTRDRNVALNLFWAWWWPLVLISFPFVGRLWCAVCPFMIYGELMQKLSLKLFPR-DLLPWPRQMADKWGGWFLFGLFVLILLWEELWNLENTAYLSACLLLLITAGAVIFSQLFERRFWCRYLCPIGGMNGLFAKLSIVELRAQQGICSASCTTYQCYKGGPEKGEGQETNGCPVYSHPAQLTDNR 631
BLAST of EWM25604.1 vs. NCBI_GenBank
Match: gi|1053971769|ref|WP_066117681.1| (AAA family ATPase [Geminocystis sp. NIES-3709] >gi|770471792|dbj|BAQ64684.1| transcriptional regulatory protein tyrR [Geminocystis sp. NIES-3709]) HSP 1 Score: 233.032 bits (593), Expect = 1.790e-67 Identity = 113/210 (53.81%), Postives = 137/210 (65.24%), Query Frame = 0
Query: 7 NLFETVPWLRQFLRDIDWPHGLNNGFTRYIFPIYLAGLFLGPQDRDHNVLLQLFWSWWWPAIMVIYPVLGRIWCSVCPFMIYGEWAQETLKKVFPTFKLKKWPQFITQKWGPWFLYGLFVAILYWEELWDLPQNAALSAWLLLLITGGAVVTSLQYEKRLWCASLCPIGGMNGMFAKLSLLSVRTEPGLCQS-CGQYLCINNEKNNKPGM 215
NL P LR FLR WP +N G T FPI +A LF GPQ RD N L LFW+WWWP I++ +P +GR+WCSVCPFMIYGE Q+ +FP +LK WP+ +KWG WFL+GLF IL WEELW+LP A LSA LLLLIT GA++ S +E+R WC LCPIGGMNGMFAKLS+ +R + G C + C Y C G+
Sbjct: 382 NLLNAYPRLRYFLRSAWWPDRINYGITLTAFPIIIAILFFGPQTRDQNFALNLFWAWWWPLILIGFPFVGRLWCSVCPFMIYGEVTQKLSVWLFPNHQLKSWPRETAEKWGGWFLFGLFTLILLWEELWELPNTAYLSACLLLLITAGAMICSAIFERRFWCRYLCPIGGMNGMFAKLSMTELRAQQGTCSAECTTYQCYKGGPQKGEGL 591
BLAST of EWM25604.1 vs. NCBI_GenBank
Match: gi|1130430120|ref|WP_075598867.1| (AAA family ATPase [Oscillatoriales cyanobacterium 'hensonii'] >gi|1129071913|gb|OLP17904.1| AAA family ATPase [Oscillatoriales cyanobacterium 'hensonii']) HSP 1 Score: 233.032 bits (593), Expect = 2.441e-67 Identity = 115/218 (52.75%), Postives = 143/218 (65.60%), Query Frame = 0
Query: 7 NLFETVPWLRQFLRDIDWPHGLNNGFTRYIFPIYLAGLFLGPQDRDHNVLLQLFWSWWWPAIMVIYPVLGRIWCSVCPFMIYGEWAQETLKKVFPTFKLKKWPQFITQKWGPWFLYGLFVAILYWEELWDLPQNAALSAWLLLLITGGAVVTSLQYEKRLWCASLCPIGGMNGMFAKLSLLSVRTEPGLC-QSCGQYLCI-----NNEKNNKPGMPVY 218
NL PWLRQFLR WP +N GFT +F I + LFLGPQ RD N+ L FW+WWWP I++ +P +GR+WCSVCPFMIYGE AQ+ ++P +L +WP+ + G WFL+GLF IL WEELWDL A LSA LLLLIT GAV+ SL +E+R WC LCPIGGMNG+FAKLS+ +R + G+C +C Y C E G P+Y
Sbjct: 402 NLLNVYPWLRQFLRSAWWPDRINYGFTLAVFAIVVVLLFLGPQTRDRNIALNFFWAWWWPGILLAFPFVGRLWCSVCPFMIYGELAQKLSLWIYPR-QLGRWPRQAADRIGGWFLFGLFTLILLWEELWDLENTAYLSACLLLLITAGAVICSLLFERRFWCRYLCPIGGMNGLFAKLSMTELRAQQGICVATCTTYQCYKGGPQKGEGQETEGCPLY 618
BLAST of EWM25604.1 vs. NCBI_GenBank
Match: gi|1204967121|ref|WP_087709685.1| (AAA family ATPase [Phormidium sp. HE10JO]) HSP 1 Score: 231.876 bits (590), Expect = 5.264e-67 Identity = 115/228 (50.44%), Postives = 150/228 (65.79%), Query Frame = 0
Query: 7 NLFETVPWLRQFLRDIDWPHGLNNGFTRYIFPIYLAGLFLGPQDRDHNVLLQLFWSWWWPAIMVIYPVLGRIWCSVCPFMIYGEWAQETLKKVFPTFKLKKWPQFITQKWGPWFLYGLFVAILYWEELWDLPQNAALSAWLLLLITGGAVVTSLQYEKRLWCASLCPIGGMNGMFAKLSLLSVRTEPGLCQS-CGQYLCI-----NNEKNNKPGMPVYILESRFSFGR 228
NLF++ P LRQFLR W GLN G T ++F + + LF+GPQ RD NV L LFW+WWWP I++ +P +GR+WC+VCPFMIYGE +Q+ K+FP +LK WP+ ++WG WFL+GLF I WEELW L A LS+ LLLLIT GAV+ SL +E+R WC LCPIGGMNG+FAKLS+ +R + G+C + C Y C E G P+Y ++ R
Sbjct: 398 NLFKSYPQLRQFLRGKFWTDGLNYGITTWVFALVVILLFVGPQTRDQNVALNLFWAWWWPLILIGFPFVGRLWCAVCPFMIYGELSQKLSLKLFPR-QLKPWPRQAAERWGGWFLFGLFALIFLWEELWHLQNTAYLSSCLLLLITAGAVIFSLLFERRFWCRYLCPIGGMNGLFAKLSMTELRAQTGICSAECTTYQCYKGGPEKGEGQETNGCPLYSHPAQLQDNR 624
BLAST of EWM25604.1 vs. NCBI_GenBank
Match: gi|938304419|gb|KPQ37905.1| (Sigma54-dependent transcriptional regulator with 4Fe-4S-binding domain [Phormidium sp. OSCR]) HSP 1 Score: 231.876 bits (590), Expect = 5.877e-67 Identity = 115/228 (50.44%), Postives = 149/228 (65.35%), Query Frame = 0
Query: 7 NLFETVPWLRQFLRDIDWPHGLNNGFTRYIFPIYLAGLFLGPQDRDHNVLLQLFWSWWWPAIMVIYPVLGRIWCSVCPFMIYGEWAQETLKKVFPTFKLKKWPQFITQKWGPWFLYGLFVAILYWEELWDLPQNAALSAWLLLLITGGAVVTSLQYEKRLWCASLCPIGGMNGMFAKLSLLSVRTEPGLCQS-CGQYLCI-----NNEKNNKPGMPVYILESRFSFGR 228
NLF+T P LRQFLR W GLN G T ++F + + LF+GPQ RD NV L LFW+WWWP +++ +P +GR+WC+VCPFMIYGE Q+ K+FP +LK WP+ ++WG WFL+GLF I WEELW L A LS+ LLLLIT GAV+ SL +E+R WC LCPIGGMNG+FAKLS+ +R + G+C + C Y C E G P+Y ++ R
Sbjct: 398 NLFKTYPQLRQFLRGKFWTDGLNYGITTWVFALVVILLFVGPQTRDQNVALNLFWAWWWPLVLIGFPFVGRLWCAVCPFMIYGELTQKLSLKLFPR-QLKPWPRQAAERWGGWFLFGLFALIFLWEELWHLQNTAYLSSCLLLLITAGAVIFSLLFERRFWCRYLCPIGGMNGLFAKLSMTELRAQTGICSAECTTYQCYKGGPEKGEGQETNGCPLYSHPAQLQDNR 624 The following BLAST results are available for this feature:
BLAST of EWM25604.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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