EWM30167.1, cds506 (CDS) Nannochloropsis gaditana

Overview
NameEWM30167.1
Unique Namecds506
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1272520..1273368 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30167.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100096g15.975.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1272520..1273368 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|585112824|gb|EWM30167.1| (hypothetical protein Naga_100096g15 [Nannochloropsis gaditana])

HSP 1 Score: 578.556 bits (1490), Expect = 0.000e+0
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
Query:    1 MGAYISSSVQANSSRPQSSRPALSSSNNSGPAYRGGHLHSSHGRRPMRLSRHNPWAFQTAVSEALKRRGYIDALWDALSNGDKSSHRAPVPCEVLPLILHFAGSYKEMTLSKEEPVRISNGNFAYLTHPIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQYLRVD 282
            MGAYISSSVQANSSRPQSSRPALSSSNNSGPAYRGGHLHSSHGRRPMRLSRHNPWAFQTAVSEALKRRGYIDALWDALSNGDKSSHRAPVPCEVLPLILHFAGSYKEMTLSKEEPVRISNGNFAYLTHPIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQYLRVD
Sbjct:    1 MGAYISSSVQANSSRPQSSRPALSSSNNSGPAYRGGHLHSSHGRRPMRLSRHNPWAFQTAVSEALKRRGYIDALWDALSNGDKSSHRAPVPCEVLPLILHFAGSYKEMTLSKEEPVRISNGNFAYLTHPIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQYLRVD 282          
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|325181317|emb|CCA15732.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 80.4925 bits (197), Expect = 3.206e-14
Identity = 64/205 (31.22%), Postives = 90/205 (43.90%), Query Frame = 0
Query:   86 HRAPVPCEVLPLILHFAGSYKEMTLSKEEPVRI---SNGNFAYLTHPIPTNL--HGHQVVGARISV---TSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQYLRVD 282
            HR  VP E+   IL FAG    M + K+    +   S+ N+ YL  PIP      G QV    + V   +SHDQGW+S    L GTY  SYTW E  + E+        +   RV +G  V R  H  +    H +  + P                    S     + +++PG  L L+L +QYPGW+NF     I + YL ++
Sbjct:   42 HRQSVPLEICNDILTFAGFV--MIIQKDTTAFLRGYSHMNYCYLESPIPAAELPQGVQVSSCCLCVVDISSHDQGWASSDTALNGTYEASYTWSELAIAETKD--QKVVELTNRVCIGQNV-RASHEFR----HHRRALTP--------------------SAQASFLKSIKPGIWLRLYLLSQYPGWSNFANYGSIKV-YLSLE 216          
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|635369855|emb|CCI42075.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 78.5666 bits (192), Expect = 8.614e-13
Identity = 63/205 (30.73%), Postives = 94/205 (45.85%), Query Frame = 0
Query:   86 HRAPVPCEVLPLILHFAGSYKEMTLSKEEPVRI---SNGNFAYLTHPIPTNL--HGHQVVGARISV---TSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQYLRVD 282
            HR  VP ++   IL  AG    + L KE    +   SN N+ YL  PI +     G QV    + V   +SHDQGW+S    L GTY  SYTW E  +VES S                         ++++  E+ ++GP  + R   +     +   V S  G  + +++ G+ L L+L +QYPGW+NF     I + YL ++
Sbjct:   42 HRQSVPLDICNEILTLAGFV--LMLEKETTAFLRGSSNMNYCYLELPISSIELSQGTQVKSCCLCVVDISSHDQGWASSDSALNGTYEASYTWSELALVESKSQ------------------------EVFEHSERLYIGP--NIRASHEF-RHHRRVLVPSTHGPFLDSIKLGKWLRLYLLSQYPGWSNFANYGSIKV-YLSLE 216          
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|628226630|ref|XP_007721323.1| (hypothetical protein A1O1_02222 [Capronia coronata CBS 617.96] >gi|590018630|gb|EXJ93829.1| hypothetical protein A1O1_02222 [Capronia coronata CBS 617.96])

HSP 1 Score: 75.8702 bits (185), Expect = 2.005e-12
Identity = 54/191 (28.27%), Postives = 92/191 (48.17%), Query Frame = 0
Query:   90 VPCEVLPLILHFAGSYKEMTL-SKEEPVRI--SNGNFAYLTHPIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQ 277
            +P +++P +L  AG + ++ L S+  P+ +  +     YL   +P       +     +VTS DQGW  ++ H   TY+ S+TW E +V  S+S  ST     PR+ V  ++  N+HA + ++TH   +               + K+E +    G L+ ++R G  +AL + A YP W N  + A I  Q
Sbjct:   95 MPVDLIPGVLDMAGFWLDVPLASRTCPITVIETTAGLEYLAVDLPETFPAKGLRSLTFTVTSKDQGWGWDN-HFFNTYMNSHTWFEVVVYPSNSGPSTASSR-PRLPVARKIITNVHAGREYKTHTVRW-------------SHDDKDEEI----GKLVRSIRGGTRIALTVWAHYPAWVNDVRSARIDCQ 266          
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|759209084|gb|KIV86430.1| (hypothetical protein PV11_02042 [Exophiala sideris])

HSP 1 Score: 73.559 bits (179), Expect = 1.280e-11
Identity = 54/188 (28.72%), Postives = 85/188 (45.21%), Query Frame = 0
Query:   93 EVLPLILHFAGSYKEMTLSK---EEPVRISNGNFAYLTHPIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQ 277
            +++P I+  A  + ++ L+    E  V   N    YL   IP N     +     SVTS DQG+++     R TY  S+TW E  V+  +  + T  +      +G  +  N+HA K W+TH  T+             DEE +         D++++LRPG  +A+   A+YP W N  + A I  Q
Sbjct:   94 DLVPSIMDMAEFWADVPLATNIHEMRVTEENAGSVYLVAEIPQNFPPKGLRSLTFSVTSRDQGFTN-FEQFRHTYHHSHTWFEVAVLPDAEESDTEHEETKTPPLGKWIITNIHADKEWETHTVTW--------SCNDEDEEIR---------DIVTSLRPGSKIAITAWARYPAWVNNVRSARIDCQ 263          
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|629645622|ref|XP_007801165.1| (hypothetical protein EPUS_03032 [Endocarpon pusillum Z07020] >gi|539437283|gb|ERF73191.1| hypothetical protein EPUS_03032 [Endocarpon pusillum Z07020])

HSP 1 Score: 72.4034 bits (176), Expect = 2.078e-11
Identity = 61/199 (30.65%), Postives = 97/199 (48.74%), Query Frame = 0
Query:   87 RAPVPCEVLPLILHFAGSYKEMTLSKEEP---VRISNGNFAYLTHPIPTNLHGHQVV-GARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQYLRV 281
            R  +  +++P+IL FA  +   T S +E    V+ + G   YL+  +   + G +++    I VTSHDQGWSS  P   GTY GS+TW EA V  + S     ++      V  E+ RN+HA    +TH  T+       R   + D E           DL+ +L PG ++++   A++PGW N+   A + +  + V
Sbjct:   54 RQILVADLIPIILDFAEYWPRTTYSCQESKTYVQHTAGR-PYLSAVLSNAVCGPRMIRKIEIHVTSHDQGWSS-FPQDHGTYNGSWTWFEAEVRSAGSVGEDEDEH----CVKKELCRNVHADATDKTHTTTW-------RYDAEDDGER----------DLVRSLGPGSSISVVPWARFPGWQNYVTCASVDVYAVAV 229          
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|1063853903|ref|XP_017992956.1| (hypothetical protein Malapachy_2676 [Malassezia pachydermatis] >gi|924817192|gb|KOS15324.1| hypothetical protein Malapachy_2676 [Malassezia pachydermatis])

HSP 1 Score: 72.7886 bits (177), Expect = 2.337e-11
Identity = 60/203 (29.56%), Postives = 97/203 (47.78%), Query Frame = 0
Query:   87 RAPVPCEVLPLILHFAGSYKEMTLSKEEP-VRISNGNFAYL-THPIPTNLHGHQVVGARISVTSHDQGWSSE-HPHLRGTYIGSYTWGE------ALVVESSSPT-STTEQGIP--RVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQ 277
            R  +P E+L  +  FA    ++ +S+    +  +N N  YL T P+ ++LH   ++   + + SHDQGWSSE +    GTY GSYTW +      A   +SS+ T S TE+ +P    +   E+ RN+HA   ++ H  T     +SP                     ++   +PG  L + +  Q+PGW NF + A I ++
Sbjct:   88 RKGLPPELLRRVDAFADEGYDLCVSRSFLGMYTNNANTRYLYTPPLASSLHHGCLLRVEVEMDSHDQGWSSEPNRSWLGTYQGSYTWWDLTLERPAQAAQSSAETGSDTEEDVPAWTEIHRQELCRNIHASDAFKVH--TITLDTSSP---------------------IVQDAQPGDRLCVWVRTQFPGWINFARHASIRVR 267          
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|824362661|gb|KLJ06325.1| (hypothetical protein EMPG_10257 [Emmonsia parva UAMH 139])

HSP 1 Score: 72.0182 bits (175), Expect = 4.837e-11
Identity = 70/238 (29.41%), Postives = 100/238 (42.02%), Query Frame = 0
Query:   83 KSSHRAPVPCEVLPLILHFAG-SYKEM-TLSKEEPVRI-SNGNFAY-LTHPIPT---------NLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTST--------TEQGIPRVVVG-TEVYRNL-------------------HAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGD-LISALRPGRALALHLHAQYPGWTNFTQGAHITIQY 278
            KS+H A +P E+  ++L FA  S K+M + +     RI S+G   Y L    P           L   ++   R  + SHDQGW  E    RGTY G+++W EA ++  +  +                R  +G +EVYR                     + V I +T  +  V  L    GKG    +S+EE   S  GD  +  LRPG  + L   A YPGW N  + A I + Y
Sbjct:   48 KSTHPA-LPTEIADIVLDFADYSVKDMLSFNPGAGYRIVSHGPGVYGLILKGPQIRELKQSGGELRDLRIKAVRFEIASHDQGWGGE-AGTRGTYHGAFSWFEATILRRNDRSGAGVEPPPNVEPVVPDRTFIGYSEVYRPFGWDFATDDKGDVLTWLVQKNKVAIKETQTREIVWMLDGDGGKGHEQAKSEEEDTGSGSGDGFVRTLRPGDVICLWARAIYPGWANVVEKAKIEVAY 283          
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|1168086847|gb|OQD87718.1| (hypothetical protein PENANT_c005G02178 [Penicillium antarcticum])

HSP 1 Score: 70.0922 bits (170), Expect = 8.329e-10
Identity = 56/161 (34.78%), Postives = 71/161 (44.10%), Query Frame = 0
Query:  129 PIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEE------GVQSDGGD-------LISALRPGRALALHLHAQYPGWTNFTQGAHITI 276
            PI  NLH H V      V SHDQG+S +  HL G Y GSYTW +A    S  P     + IP    G E+ RN+HA   W  H   +           + D+E+KEE       V+ D           IS + PG  L ++  A +PGW N  Q A   I
Sbjct: 1350 PIFGNLH-HPVRRIDYEVISHDQGYSGD-SHLHGQYDGSYTWFDASRECSPGPFEQAARRIP----GPEILRNVHASYAWHKHRVIWCSTTGESYLHVRTDKETKEEIEEPVATVRYDHRQPKPVPLKWISEINPGDRLVMNAIAMFPGWENHIQRAKAII 1504          
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|646393647|gb|KDQ58104.1| (hypothetical protein JAAARDRAFT_193565 [Jaapia argillacea MUCL 33604])

HSP 1 Score: 66.6254 bits (161), Expect = 8.542e-10
Identity = 56/187 (29.95%), Postives = 79/187 (42.25%), Query Frame = 0
Query:   90 VPCEVLPLILHFAGSYKEMTLSKEEPVRISNGNFAYLTHPIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITI 276
            +P E++  ILH A  Y  +  ++     IS+  F  L     T     +VV   I V  HDQGWSS +P  +GTY GS+TW EA +            G+ R         NLHA   WQ HE                        V  +  +L+ +LR G ++ L+  A+YPGW N  +   I +
Sbjct:   20 LPIELVDSILHQAEYYTILHSTRPVETTISDSTFCCL-RSRRTEKPVKRVV---IKVEGHDQGWSS-YPADQGTYRGSWTWFEAGIGNKEGGEGERRWGVAR---------NLHAESAWQVHEV-----------------------VWGEDHELLKSLREGDSIDLYAAARYPGWRNTFRNVEIEV 169          
The following BLAST results are available for this feature:
BLAST of EWM30167.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112824|gb|EWM30167.1|0.000e+0100.00hypothetical protein Naga_100096g15 [Nannochlorops... [more]
gi|325181317|emb|CCA15732.1|3.206e-1431.22conserved hypothetical protein [Albugo laibachii N... [more]
gi|635369855|emb|CCI42075.1|8.614e-1330.73unnamed protein product [Albugo candida][more]
gi|628226630|ref|XP_007721323.1|2.005e-1228.27hypothetical protein A1O1_02222 [Capronia coronata... [more]
gi|759209084|gb|KIV86430.1|1.280e-1128.72hypothetical protein PV11_02042 [Exophiala sideris... [more]
gi|629645622|ref|XP_007801165.1|2.078e-1130.65hypothetical protein EPUS_03032 [Endocarpon pusill... [more]
gi|1063853903|ref|XP_017992956.1|2.337e-1129.56hypothetical protein Malapachy_2676 [Malassezia pa... [more]
gi|824362661|gb|KLJ06325.1|4.837e-1129.41hypothetical protein EMPG_10257 [Emmonsia parva UA... [more]
gi|1168086847|gb|OQD87718.1|8.329e-1034.78hypothetical protein PENANT_c005G02178 [Penicilliu... [more]
gi|646393647|gb|KDQ58104.1|8.542e-1029.95hypothetical protein JAAARDRAFT_193565 [Jaapia arg... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna506rna506Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications