EWM30167.1, cds506 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|585112824|gb|EWM30167.1| (hypothetical protein Naga_100096g15 [Nannochloropsis gaditana]) HSP 1 Score: 578.556 bits (1490), Expect = 0.000e+0 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
Query: 1 MGAYISSSVQANSSRPQSSRPALSSSNNSGPAYRGGHLHSSHGRRPMRLSRHNPWAFQTAVSEALKRRGYIDALWDALSNGDKSSHRAPVPCEVLPLILHFAGSYKEMTLSKEEPVRISNGNFAYLTHPIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQYLRVD 282
MGAYISSSVQANSSRPQSSRPALSSSNNSGPAYRGGHLHSSHGRRPMRLSRHNPWAFQTAVSEALKRRGYIDALWDALSNGDKSSHRAPVPCEVLPLILHFAGSYKEMTLSKEEPVRISNGNFAYLTHPIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQYLRVD
Sbjct: 1 MGAYISSSVQANSSRPQSSRPALSSSNNSGPAYRGGHLHSSHGRRPMRLSRHNPWAFQTAVSEALKRRGYIDALWDALSNGDKSSHRAPVPCEVLPLILHFAGSYKEMTLSKEEPVRISNGNFAYLTHPIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQYLRVD 282
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|325181317|emb|CCA15732.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 80.4925 bits (197), Expect = 3.206e-14 Identity = 64/205 (31.22%), Postives = 90/205 (43.90%), Query Frame = 0
Query: 86 HRAPVPCEVLPLILHFAGSYKEMTLSKEEPVRI---SNGNFAYLTHPIPTNL--HGHQVVGARISV---TSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQYLRVD 282
HR VP E+ IL FAG M + K+ + S+ N+ YL PIP G QV + V +SHDQGW+S L GTY SYTW E + E+ + RV +G V R H + H + + P S + +++PG L L+L +QYPGW+NF I + YL ++
Sbjct: 42 HRQSVPLEICNDILTFAGFV--MIIQKDTTAFLRGYSHMNYCYLESPIPAAELPQGVQVSSCCLCVVDISSHDQGWASSDTALNGTYEASYTWSELAIAETKD--QKVVELTNRVCIGQNV-RASHEFR----HHRRALTP--------------------SAQASFLKSIKPGIWLRLYLLSQYPGWSNFANYGSIKV-YLSLE 216
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|635369855|emb|CCI42075.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 78.5666 bits (192), Expect = 8.614e-13 Identity = 63/205 (30.73%), Postives = 94/205 (45.85%), Query Frame = 0
Query: 86 HRAPVPCEVLPLILHFAGSYKEMTLSKEEPVRI---SNGNFAYLTHPIPTNL--HGHQVVGARISV---TSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQYLRVD 282
HR VP ++ IL AG + L KE + SN N+ YL PI + G QV + V +SHDQGW+S L GTY SYTW E +VES S ++++ E+ ++GP + R + + V S G + +++ G+ L L+L +QYPGW+NF I + YL ++
Sbjct: 42 HRQSVPLDICNEILTLAGFV--LMLEKETTAFLRGSSNMNYCYLELPISSIELSQGTQVKSCCLCVVDISSHDQGWASSDSALNGTYEASYTWSELALVESKSQ------------------------EVFEHSERLYIGP--NIRASHEF-RHHRRVLVPSTHGPFLDSIKLGKWLRLYLLSQYPGWSNFANYGSIKV-YLSLE 216
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|628226630|ref|XP_007721323.1| (hypothetical protein A1O1_02222 [Capronia coronata CBS 617.96] >gi|590018630|gb|EXJ93829.1| hypothetical protein A1O1_02222 [Capronia coronata CBS 617.96]) HSP 1 Score: 75.8702 bits (185), Expect = 2.005e-12 Identity = 54/191 (28.27%), Postives = 92/191 (48.17%), Query Frame = 0
Query: 90 VPCEVLPLILHFAGSYKEMTL-SKEEPVRI--SNGNFAYLTHPIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQ 277
+P +++P +L AG + ++ L S+ P+ + + YL +P + +VTS DQGW ++ H TY+ S+TW E +V S+S ST PR+ V ++ N+HA + ++TH + + K+E + G L+ ++R G +AL + A YP W N + A I Q
Sbjct: 95 MPVDLIPGVLDMAGFWLDVPLASRTCPITVIETTAGLEYLAVDLPETFPAKGLRSLTFTVTSKDQGWGWDN-HFFNTYMNSHTWFEVVVYPSNSGPSTASSR-PRLPVARKIITNVHAGREYKTHTVRW-------------SHDDKDEEI----GKLVRSIRGGTRIALTVWAHYPAWVNDVRSARIDCQ 266
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|759209084|gb|KIV86430.1| (hypothetical protein PV11_02042 [Exophiala sideris]) HSP 1 Score: 73.559 bits (179), Expect = 1.280e-11 Identity = 54/188 (28.72%), Postives = 85/188 (45.21%), Query Frame = 0
Query: 93 EVLPLILHFAGSYKEMTLSK---EEPVRISNGNFAYLTHPIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQ 277
+++P I+ A + ++ L+ E V N YL IP N + SVTS DQG+++ R TY S+TW E V+ + + T + +G + N+HA K W+TH T+ DEE + D++++LRPG +A+ A+YP W N + A I Q
Sbjct: 94 DLVPSIMDMAEFWADVPLATNIHEMRVTEENAGSVYLVAEIPQNFPPKGLRSLTFSVTSRDQGFTN-FEQFRHTYHHSHTWFEVAVLPDAEESDTEHEETKTPPLGKWIITNIHADKEWETHTVTW--------SCNDEDEEIR---------DIVTSLRPGSKIAITAWARYPAWVNNVRSARIDCQ 263
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|629645622|ref|XP_007801165.1| (hypothetical protein EPUS_03032 [Endocarpon pusillum Z07020] >gi|539437283|gb|ERF73191.1| hypothetical protein EPUS_03032 [Endocarpon pusillum Z07020]) HSP 1 Score: 72.4034 bits (176), Expect = 2.078e-11 Identity = 61/199 (30.65%), Postives = 97/199 (48.74%), Query Frame = 0
Query: 87 RAPVPCEVLPLILHFAGSYKEMTLSKEEP---VRISNGNFAYLTHPIPTNLHGHQVV-GARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQYLRV 281
R + +++P+IL FA + T S +E V+ + G YL+ + + G +++ I VTSHDQGWSS P GTY GS+TW EA V + S ++ V E+ RN+HA +TH T+ R + D E DL+ +L PG ++++ A++PGW N+ A + + + V
Sbjct: 54 RQILVADLIPIILDFAEYWPRTTYSCQESKTYVQHTAGR-PYLSAVLSNAVCGPRMIRKIEIHVTSHDQGWSS-FPQDHGTYNGSWTWFEAEVRSAGSVGEDEDEH----CVKKELCRNVHADATDKTHTTTW-------RYDAEDDGER----------DLVRSLGPGSSISVVPWARFPGWQNYVTCASVDVYAVAV 229
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|1063853903|ref|XP_017992956.1| (hypothetical protein Malapachy_2676 [Malassezia pachydermatis] >gi|924817192|gb|KOS15324.1| hypothetical protein Malapachy_2676 [Malassezia pachydermatis]) HSP 1 Score: 72.7886 bits (177), Expect = 2.337e-11 Identity = 60/203 (29.56%), Postives = 97/203 (47.78%), Query Frame = 0
Query: 87 RAPVPCEVLPLILHFAGSYKEMTLSKEEP-VRISNGNFAYL-THPIPTNLHGHQVVGARISVTSHDQGWSSE-HPHLRGTYIGSYTWGE------ALVVESSSPT-STTEQGIP--RVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITIQ 277
R +P E+L + FA ++ +S+ + +N N YL T P+ ++LH ++ + + SHDQGWSSE + GTY GSYTW + A +SS+ T S TE+ +P + E+ RN+HA ++ H T +SP ++ +PG L + + Q+PGW NF + A I ++
Sbjct: 88 RKGLPPELLRRVDAFADEGYDLCVSRSFLGMYTNNANTRYLYTPPLASSLHHGCLLRVEVEMDSHDQGWSSEPNRSWLGTYQGSYTWWDLTLERPAQAAQSSAETGSDTEEDVPAWTEIHRQELCRNIHASDAFKVH--TITLDTSSP---------------------IVQDAQPGDRLCVWVRTQFPGWINFARHASIRVR 267
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|824362661|gb|KLJ06325.1| (hypothetical protein EMPG_10257 [Emmonsia parva UAMH 139]) HSP 1 Score: 72.0182 bits (175), Expect = 4.837e-11 Identity = 70/238 (29.41%), Postives = 100/238 (42.02%), Query Frame = 0
Query: 83 KSSHRAPVPCEVLPLILHFAG-SYKEM-TLSKEEPVRI-SNGNFAY-LTHPIPT---------NLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTST--------TEQGIPRVVVG-TEVYRNL-------------------HAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGD-LISALRPGRALALHLHAQYPGWTNFTQGAHITIQY 278
KS+H A +P E+ ++L FA S K+M + + RI S+G Y L P L ++ R + SHDQGW E RGTY G+++W EA ++ + + R +G +EVYR + V I +T + V L GKG +S+EE S GD + LRPG + L A YPGW N + A I + Y
Sbjct: 48 KSTHPA-LPTEIADIVLDFADYSVKDMLSFNPGAGYRIVSHGPGVYGLILKGPQIRELKQSGGELRDLRIKAVRFEIASHDQGWGGE-AGTRGTYHGAFSWFEATILRRNDRSGAGVEPPPNVEPVVPDRTFIGYSEVYRPFGWDFATDDKGDVLTWLVQKNKVAIKETQTREIVWMLDGDGGKGHEQAKSEEEDTGSGSGDGFVRTLRPGDVICLWARAIYPGWANVVEKAKIEVAY 283
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|1168086847|gb|OQD87718.1| (hypothetical protein PENANT_c005G02178 [Penicillium antarcticum]) HSP 1 Score: 70.0922 bits (170), Expect = 8.329e-10 Identity = 56/161 (34.78%), Postives = 71/161 (44.10%), Query Frame = 0
Query: 129 PIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEE------GVQSDGGD-------LISALRPGRALALHLHAQYPGWTNFTQGAHITI 276
PI NLH H V V SHDQG+S + HL G Y GSYTW +A S P + IP G E+ RN+HA W H + + D+E+KEE V+ D IS + PG L ++ A +PGW N Q A I
Sbjct: 1350 PIFGNLH-HPVRRIDYEVISHDQGYSGD-SHLHGQYDGSYTWFDASRECSPGPFEQAARRIP----GPEILRNVHASYAWHKHRVIWCSTTGESYLHVRTDKETKEEIEEPVATVRYDHRQPKPVPLKWISEINPGDRLVMNAIAMFPGWENHIQRAKAII 1504
BLAST of EWM30167.1 vs. NCBI_GenBank
Match: gi|646393647|gb|KDQ58104.1| (hypothetical protein JAAARDRAFT_193565 [Jaapia argillacea MUCL 33604]) HSP 1 Score: 66.6254 bits (161), Expect = 8.542e-10 Identity = 56/187 (29.95%), Postives = 79/187 (42.25%), Query Frame = 0
Query: 90 VPCEVLPLILHFAGSYKEMTLSKEEPVRISNGNFAYLTHPIPTNLHGHQVVGARISVTSHDQGWSSEHPHLRGTYIGSYTWGEALVVESSSPTSTTEQGIPRVVVGTEVYRNLHAVKIWQTHEKTFVGPLASPRGKGQVDEESKEEGVQSDGGDLISALRPGRALALHLHAQYPGWTNFTQGAHITI 276
+P E++ ILH A Y + ++ IS+ F L T +VV I V HDQGWSS +P +GTY GS+TW EA + G+ R NLHA WQ HE V + +L+ +LR G ++ L+ A+YPGW N + I +
Sbjct: 20 LPIELVDSILHQAEYYTILHSTRPVETTISDSTFCCL-RSRRTEKPVKRVV---IKVEGHDQGWSS-YPADQGTYRGSWTWFEAGIGNKEGGEGERRWGVAR---------NLHAESAWQVHEV-----------------------VWGEDHELLKSLREGDSIDLYAAARYPGWRNTFRNVEIEV 169 The following BLAST results are available for this feature:
BLAST of EWM30167.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|