EWM25621.1, cds5053 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25621.1 vs. NCBI_GenBank
Match: gi|585107445|gb|EWM25621.1| (hypothetical protein Naga_100251g6 [Nannochloropsis gaditana]) HSP 1 Score: 777.704 bits (2007), Expect = 0.000e+0 Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
Query: 1 MQQEDTTAHTSISVATSKKPDEGQHMMPPAAPVEDSTLRFNTCITTRSNGSTASSISQKGTLDVMFLGTGVSIAVPNMGHVLEGHCATCMRAHSNPASKDRRNNVSIAILVNGTGQGPADSDRDCILVDAGKTMRDAILRRFPAAGVRSVQALLLTHDHADATFGLDDLRDLQMKEHEEGVGIHLLDEPIDVYLQDATLTALKHQFGYLVGATPWADKARRILQRNVPVLAWHPLATDDASFELTRSRVPVRAFPVFHGGEYVSLGFAFGQPGEFVYISDVKRIPPPSMAFLQSLPPIQTLVVDCISTTETSHYSHFNLAEALALVDTLRPRHTYLTGMCCEVGAHEEVEEKLRGMGYPHVSLAWDGMVLGGLRV 375
MQQEDTTAHTSISVATSKKPDEGQHMMPPAAPVEDSTLRFNTCITTRSNGSTASSISQKGTLDVMFLGTGVSIAVPNMGHVLEGHCATCMRAHSNPASKDRRNNVSIAILVNGTGQGPADSDRDCILVDAGKTMRDAILRRFPAAGVRSVQALLLTHDHADATFGLDDLRDLQMKEHEEGVGIHLLDEPIDVYLQDATLTALKHQFGYLVGATPWADKARRILQRNVPVLAWHPLATDDASFELTRSRVPVRAFPVFHGGEYVSLGFAFGQPGEFVYISDVKRIPPPSMAFLQSLPPIQTLVVDCISTTETSHYSHFNLAEALALVDTLRPRHTYLTGMCCEVGAHEEVEEKLRGMGYPHVSLAWDGMVLGGLRV
Sbjct: 1 MQQEDTTAHTSISVATSKKPDEGQHMMPPAAPVEDSTLRFNTCITTRSNGSTASSISQKGTLDVMFLGTGVSIAVPNMGHVLEGHCATCMRAHSNPASKDRRNNVSIAILVNGTGQGPADSDRDCILVDAGKTMRDAILRRFPAAGVRSVQALLLTHDHADATFGLDDLRDLQMKEHEEGVGIHLLDEPIDVYLQDATLTALKHQFGYLVGATPWADKARRILQRNVPVLAWHPLATDDASFELTRSRVPVRAFPVFHGGEYVSLGFAFGQPGEFVYISDVKRIPPPSMAFLQSLPPIQTLVVDCISTTETSHYSHFNLAEALALVDTLRPRHTYLTGMCCEVGAHEEVEEKLRGMGYPHVSLAWDGMVLGGLRV 375
BLAST of EWM25621.1 vs. NCBI_GenBank
Match: gi|873226613|emb|CEM20900.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 203.371 bits (516), Expect = 8.554e-58 Identity = 129/329 (39.21%), Postives = 179/329 (54.41%), Query Frame = 0
Query: 64 VMFLGTGVSIAVPNMGHVL--EGHCATCMRAHSNPASKDRRNNVSIAILVNGTGQGPADSDRDCILVDAGKTMRDAILRRFPAAGVRSVQALLLTHDHADATFGLDDLRDLQMKEH---EEGVGIHLLDEPIDVYLQDATLTALKHQFGYLVGATPWADKARRILQRNVPVLAWHPL------ATDDASFELTRSRVPVRAFPVFHGGEYVSLG--FAFGQPGEFVYISDVKRIPPPSMAFLQSLPPIQTLVVDCISTTETSHYSHFNLAEALALVDTLRPRHTYLTGMCCEVGAHEEVEEKLRG-----------MGYPHVSLAWDGM 368
++F+GTGVS A+P++ HVL C TC+ A +NP+S++RRNNVS+ I+ G IL+D GKT RDA +R + + ALLLTH HADA G+DD+RDLQ E +G +L E + YL TL +L QF Y++ A+ +A L+R V VL +H L A D ++FE+ + + V A PV+HG YV LG FAF VY+SDV +P F+ SL PI+ LV+D I E H+SH L EAL V +P Y GM C++ H++ EKL + V+LA+DG+
Sbjct: 41 ILFVGTGVSSALPHLEHVLSPNASCPTCLDAANNPSSRNRRNNVSLLIMHRGKN----------ILIDVGKTFRDAAIRVLRPNAIYKIDALLLTHCHADAVMGIDDVRDLQRYERPIGPDGKKRYLPVEKLPTYLSQKTLDSLSKQFHYIIKAS----QATEPLERKVTVLDFHLLKDDPSAAPDLSTFEVKGTGLVVTALPVWHGKPYVCLGFTFAFDSDERVVYLSDVSEVPHDVRDFILSLGPIKILVIDAIH-WEKQHFSHITLQEALQYVLLFQPEEAYFVGMMCDI-EHDDATEKLNQWLDDERSNNSELNVKKVALAYDGL 353
BLAST of EWM25621.1 vs. NCBI_GenBank
Match: gi|788007885|ref|XP_011774688.1| (hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] >gi|261329426|emb|CBH12407.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972]) HSP 1 Score: 177.563 bits (449), Expect = 2.184e-48 Identity = 125/363 (34.44%), Postives = 171/363 (47.11%), Query Frame = 0
Query: 64 VMFLGTGVSIAVPNMGHVLEGHCATCMRAHSNPASKDRRNNVSIAILVNGTGQGPADSDRDC----ILVDAGKTMRDAILRRFPAAGVRSVQALLLTHDHADATFGLDDLRDLQMKEHEEGVGIHLLDEPIDVYLQDATLTALKHQFGYLV------GATPWADKARRILQRNVPVLAWHPLATDDASFELTRS---------------------RVPVRAFPVFHGGEYVSLGFAFGQPGEF--------------VYISDVKRIPPPSMAFLQSLPPIQTLVVDCISTTETSHYSHFNLAEALALVDTLRPRHTYLTGMCCEVGAH------EEVEEKLRGMGYP-----HVSLAWDGMVL 370
V +G+GVS VP +GH L CA C A +P DRRNNVS+ I V +DS+ D +L+D GKT RDA R VR + LLLTHDHADA G+DDLRDLQ ++ +++ I Y + T+ +L+ QFGY+V G P + ++ + V TD+ + + + P+ A PV HG Y+SLGF FG+ VY+SDV IPP +M+FL L I L VD + E SH SH+ + + L LV L+P TY GM C++ +E E+LRG G V L +DGM +
Sbjct: 26 VTIVGSGVSTGVPVIGH-LSSDCA-CAEAFRDPQGPDRRNNVSLLITVRDAECTGSDSEDDRNAKHVLIDCGKTFRDAYFRVLAKHKVRYLDGLLLTHDHADAAGGVDDLRDLQRVTVDDASKCCTIEQYISTYASEKTIESLRQQFGYIVRNSWLMGPAPTTAEEHELVVKRVREDREREGQTDNIGYRRSAALHLYTLPDTHPSSFYIPGFGENFPMYALPVEHGKGYMSLGFVFGRGVALRSTGASSCNGYSCVVYLSDVSEIPPNAMSFLHDLVKIDVLFVDMLYGPEVSHPSHYCMDDTLQLVCELQPARTYAIGMYCDIKHAAGNRLLKERLEELRGAGKCGDGVITVELGYDGMTM 386
BLAST of EWM25621.1 vs. NCBI_GenBank
Match: gi|1173952089|gb|OQR99835.1| (hypothetical protein THRCLA_06367 [Thraustotheca clavata]) HSP 1 Score: 172.17 bits (435), Expect = 3.164e-47 Identity = 118/321 (36.76%), Postives = 171/321 (53.27%), Query Frame = 0
Query: 62 LDVMFLGTGVSIAVPNMGHVLEGH-CATCMRAHSNPASKDRRNNVSIAILVNGTGQGPADSDRDCILVDAGKTMRDAILRRFPAAGVRSVQALLLTHDHADATFGLDDLRDLQMKEHEE----GVGIHLLDEPIDVYLQDATLTALKHQFGYLVGATPWADKARRILQRNVPVLAWHPLATDDASFELTRSRVPVRAFPVFHGGEYVSLGFAFG-QPG-EFVYISDVKRIPPPSMAFLQSLP-PIQTLVVDCISTTETSHYSHFNLAEALALVDTLRPRHTYLTGMCCEVGAHEEV----EEKLRGMGYPHVSLAWDGMVL 370
++V FLGTG S +P+M +L G C C AH N SK+RRNN S+ + G +L+D GKT RD+ L+ FP+ + S+ A++LTH HADA G+DDLR+LQ+ + ++ G + +EP+ V+ T ++ +F YL+ D+A R L W L D SF + + + A P+ HG Y+ GF FG Q G FVY+SD+ I P ++AFL S P I LV+D I + H +H NL +A+A+V L+P+ TYL GM E E+ LR V +A+DG+ L
Sbjct: 1 MEVFFLGTGPSTGIPSMQCLLNGKKCDVCRDAHENHDSKNRRNNPSLLVRFQGKN----------VLIDCGKTFRDSALKVFPSNNIVSLDAIILTHGHADACLGMDDLRELQVFQSQKCSTTGEDKKIANEPMYVHCHQRTKVEIQPKFDYLMLK---PDEAETTTYRWTAKLDW-KLFNDFDSF--SAAGIQFTALPLPHGKGYLCNGFEFGAQVGIRFVYLSDLHEIAPETIAFLLSNPAKIDILVIDAIYFKDV-HGAHLNLPQAMAIVQQLQPKKTYLIGMSHEFHYKNHNTPIHEDMLRDFNLD-VEMAFDGLKL 303
BLAST of EWM25621.1 vs. NCBI_GenBank
Match: gi|669138340|ref|XP_008604738.1| (hypothetical protein SDRG_01009 [Saprolegnia diclina VS20] >gi|530743927|gb|EQC42169.1| hypothetical protein SDRG_01009 [Saprolegnia diclina VS20]) HSP 1 Score: 171.014 bits (432), Expect = 8.631e-47 Identity = 120/321 (37.38%), Postives = 170/321 (52.96%), Query Frame = 0
Query: 62 LDVMFLGTGVSIAVPNMGHVLEG-HCATCMRAHSNPASKDRRNNVSIAILVNGTGQGPADSDRDCILVDAGKTMRDAILRRFPAAGVRSVQALLLTHDHADATFGLDDLRDLQMKEH----EEGVGIHLLDEPIDVYLQDATLTALKHQFGYLVGATPWADKARRILQRNVPVLAWHPLATDDASFELTRSRVPVRAFPVFHGGEYVSLGFAFGQP--GEFVYISDVKRIPPPSMAFLQSLP-PIQTLVVDCISTTETSHYSHFNLAEALALVDTLRPRHTYLTGMCCEV--GAHEEV--EEKLRGMGYPHVSLAWDGMVL 370
++++FLGTG S VP+M +L G +CA C AH+ P SK+RRNN S+ + G +L+D GKT RD+IL+ FPA + S+ A++LTH HADA G+DDLR+LQ+ + E G + +EP+ V+ T + +F YL+ P +A + R L W L D +F + V A PV HG YV GF FG FVY+SD+ +P + A L + P PI LV+D I + H +H NL +A+ + LRP+ TYL GM E AH + LR V +A+DG+ L
Sbjct: 1 MEIIFLGTGTSTGVPSMQCLLSGKNCAVCHHAHAVPGSKNRRNNPSLLVRYGGRN----------VLIDCGKTFRDSILKVFPAKNIVSLDAIVLTHGHADACLGMDDLRELQVFQSTRCAETGEDKKIANEPMYVHCHARTKAEVGPKFDYLM-LKP--SEAEATIYRWTAKLDW-KLFEDLGAF--NAAGVAFTALPVAHGKGYVCSGFEFGADVGARFVYLSDLHELPDATRAHLLANPAPIDVLVIDAIYLHDV-HGAHLNLPQAIEIAKVLRPKKTYLVGMSHEFDYDAHNSSIHADVLRDANLD-VEMAYDGLEL 303
BLAST of EWM25621.1 vs. NCBI_GenBank
Match: gi|813102193|ref|XP_012193743.1| (hypothetical protein SPRG_00250 [Saprolegnia parasitica CBS 223.65] >gi|641541655|gb|KDO35400.1| hypothetical protein SPRG_00250 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 169.859 bits (429), Expect = 2.631e-46 Identity = 112/289 (38.75%), Postives = 157/289 (54.33%), Query Frame = 0
Query: 62 LDVMFLGTGVSIAVPNMGHVLEG-HCATCMRAHSNPASKDRRNNVSIAILVNGTGQGPADSDRDCILVDAGKTMRDAILRRFPAAGVRSVQALLLTHDHADATFGLDDLRDLQMKEH----EEGVGIHLLDEPIDVYLQDATLTALKHQFGYLVGATPWADKARRILQRNVPVLAWHPLATDDASFELTRSRVPVRAFPVFHGGEYVSLGFAFGQP--GEFVYISDVKRIPPPSMAFLQSLP-PIQTLVVDCISTTETSHYSHFNLAEALALVDTLRPRHTYLTGMCCE 342
++++FLGTG S VP+M +L G +CA C AH+ P SK+RRNN S+ + G +L+D GKT RD+IL+ FPA + S+ A++LTH HADA G+DDLR+LQ+ + E G + +EP+ V+ T + +F YL+ P +A I R L W L D SF + V A PV HG Y+ GF FG FVY+SD+ +P + A L + P PI LV+D I + H +H NL +A+ + LRP+ TYL GM E
Sbjct: 1 MEIIFLGTGTSTGVPSMQCLLSGKNCAVCHHAHAVPGSKNRRNNPSLLVRYGGRN----------VLIDCGKTFRDSILKVFPAKNIVSLDAIVLTHGHADACLGMDDLRELQVFQSTRCAETGEDKKIANEPMYVHCHARTKAEVGPKFDYLM-LKP--SEAEAITYRWTAKLDW-KLFEDLDSF--IAAGVTFTALPVAHGKGYLCSGFEFGADVGARFVYLSDLHELPDATRAHLLANPSPIDVLVIDAIYLHDV-HGAHLNLPQAIEIAKLLRPKKTYLVGMSHE 272
BLAST of EWM25621.1 vs. NCBI_GenBank
Match: gi|669170817|ref|XP_008620757.1| (hypothetical protein SDRG_16330 [Saprolegnia diclina VS20] >gi|530727573|gb|EQC25815.1| hypothetical protein SDRG_16330 [Saprolegnia diclina VS20]) HSP 1 Score: 165.236 bits (417), Expect = 1.248e-44 Identity = 107/287 (37.28%), Postives = 159/287 (55.40%), Query Frame = 0
Query: 62 LDVMFLGTGVSIAVPNMGHVLEG-HCATCMRAHSNPASKDRRNNVSIAILVNGTGQGPADSDRDCILVDAGKTMRDAILRRFPAAGVRSVQALLLTHDHADATFGLDDLRDLQM--KEHEEGVGIHLLDEPIDVYLQDATLTALKHQFGYLVGATPWADKARRILQRNVPVLAWHPLATDDASFELTRSRVPVRAFPVFHGGEYVSLGFAFGQP--GEFVYISDVKRIPPPSMAFLQSLP-PIQTLVVDCISTTETSHYSHFNLAEALALVDTLRPRHTYLTGMCCE 342
++++FLGTG S ++P M +L G +CA C AH+ P+SK+RRNN S+ + G +L+D GKT RD++L+ F A ++S+ A++LTH HADA GLDD+R+LQ+ + E G + +EP+ V+ T + +F YL+ AD + R L W + D SF+ + V A PV HG Y+ GF FG FVY+SD+ +P + A L + P PI LV+D I + H +H NL +A+ ++ LRP+ TYL GM E
Sbjct: 1 MEIIFLGTGGSSSIPWMQCLLSGTNCAVCHHAHAVPSSKNRRNNPSLLVRYGGRN----------VLIDCGKTFRDSVLKVFLAKNIKSLDAIVLTHGHADACLGLDDVRELQVFTRCAEGGDDKKMANEPMYVHCHPRTKAEVGPKFDYLMLPPLKADASS---YRWTAKLDW-KVFEDFGSFD--AAGVAFTALPVMHGKGYLCSGFEFGAEVGARFVYLSDLHELPSTTRAHLVANPAPIDVLVIDAI-YLQAVHGAHLNLPQAIEIIKLLRPKKTYLVGMSHE 270
BLAST of EWM25621.1 vs. NCBI_GenBank
Match: gi|635360496|emb|CCI50233.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 164.851 bits (416), Expect = 1.620e-44 Identity = 114/320 (35.62%), Postives = 171/320 (53.44%), Query Frame = 0
Query: 62 LDVMFLGTGVSIAVPNMGHVLEGHCATCMRAHSNPASKDRRNNVSIAILVNGTGQGPADSDRDCILVDAGKTMRDAILRRFPAAGVRSVQALLLTHDHADATFGLDDLRDLQMKEHEE-----GVGIHLLDEPIDVYLQDATLTALKHQFGYLVGATPWADKARRILQRNVPV-LAWHPLATDDASFELTRSRVPVRAFPVFHGGEYVSLGFAFG-QPGE-FVYISDVKRIPPPSMAFL-QSLPPIQTLVVDCISTTETSHYSHFNLAEALALVDTLRPRHTYLTGMCCEVGAHEEVEE--KLRGMGYPHVSLAWDGMVL 370
++V LG G S +VP+M +L C C A+ NP S++ R N SI I V + +G + IL+D GKT R A LR FP + ++ A+LLTHDHADA FGLDD+R++Q HEE + + + V+ T ++ +F YL + + AR + Q + + L L+ F VP+ PV HG +Y + G+ FG + G+ FVYISDV +PP +M +L PI L++D ++ TE H +H NL + + LV LRP+ TYLTGM + ++ E L + V +A+DG+ +
Sbjct: 1 MEVYVLGCGPSSSVPSMRCLLSSGCDVCKEAYENPTSRNHRLNPSILIRVKSS-KGTRN-----ILIDCGKTFRQASLRLFPKLQIDTIDAILLTHDHADAIFGLDDIREVQ-SFHEEIDPITKESLKVSSGALPVFCNKETQRQIESKFPYLCQSENLS--ARWVAQISFSLALPLQRLSVHGCDF------VPI---PVLHGDDYYAYGYVFGFEVGKCFVYISDVSHVPPQTMQYLVNRTDPIDILMIDALN-TERRHSTHMNLPDVINLVLKLRPKQTYLTGMSHDFDYNKTNAELRDLPALDNLKVEMAYDGLCI 301
BLAST of EWM25621.1 vs. NCBI_GenBank
Match: gi|1214711728|gb|OWZ22718.1| (hypothetical protein PHMEG_0002544 [Phytophthora megakarya]) HSP 1 Score: 164.466 bits (415), Expect = 3.293e-44 Identity = 112/328 (34.15%), Postives = 164/328 (50.00%), Query Frame = 0
Query: 62 LDVMFLGTGVSIAVPNMGHVLEGHCATCMRAHSNPASKDRRNNVSIAILVNGTGQGPADSDRDCILVDAGKTMRDAILRRFPAAGVRSVQALLLTHDHADATFGLDDLRDLQMK-EHEEGVGIHLLDEP---IDVYLQDATLTALKHQFGYLVGATPWADKA-------RRILQRNVPVLA-WHPLATDDASFELTRSRVPVRAFPVFHGGEYVSLGFAFGQP--GEFVYISDVKRIPPPSMAFLQ--SLPPIQTLVVDCISTTETSHYSHFNLAEALALVDTLRPRHTYLTGMCCEVGAHEEVEEKLRGMGYP---HVSLAWDGMVL 370
++V+ LG G S +VP+M VL C C+ AH+NP SK+RR N S+ + T + +L+D GKT R++ LR FP GV SV +L+LTHDHADA G+DDLR++Q E + V L P + V+ ++T + +F YL+ P R + + + W P + +F FPV HG Y S GF FGQ FVYISDV IP + F+ S PPI L++D + + H +H NL + + + T +P+ T LTGM E + E L MG ++ + +DG+ +
Sbjct: 1 MEVVVLGCGPSSSVPSMRCVLSQSCTVCLEAHANPESKNRRLNPSLLVRNLKTDEN--------VLIDCGKTFRESALRIFPQIGVSSVHSLVLTHDHADALLGMDDLREVQAHVETVDPVTKELYKVPPEAMKVHCSESTSHDVMAKFPYLIDYEPLPTAGEAAPKPFRWTAKLQIDAFSPWEPFESCGLTF---------LPFPVIHGEGYTSFGFEFGQEVGARFVYISDVSVIPEDTKTFVNDASKPPIDVLLIDAL-YLDKYHSTHMNLQKVMEEISTFKPKRTLLTGMSHEFDYPKHSVE-LPKMGEEKGLNIEMTYDGLCI 309
BLAST of EWM25621.1 vs. NCBI_GenBank
Match: gi|695426763|ref|XP_009529502.1| (hypothetical protein PHYSODRAFT_315934 [Phytophthora sojae] >gi|348675935|gb|EGZ15753.1| hypothetical protein PHYSODRAFT_315934 [Phytophthora sojae]) HSP 1 Score: 164.466 bits (415), Expect = 3.547e-44 Identity = 109/299 (36.45%), Postives = 151/299 (50.50%), Query Frame = 0
Query: 62 LDVMFLGTGVSIAVPNMGHVLEGHCATCMRAHSNPASKDRRNNVSIAILVNGTGQGPADSDRDCILVDAGKTMRDAILRRFPAAGVRSVQALLLTHDHADATFGLDDLRDLQMKEHEEGVG------IHLLDEPIDVYLQDATLTALKHQFGYLVG-----------ATPWADKARRILQRNVPVLAWHPLATDDASFELTRSRVPVRAFPVFHGGEYVSLGFAFGQP--GEFVYISDVKRIPPPSMAFL--QSLPPIQTLVVDCISTTETSHYSHFNLAEALALVDTLRPRHTYLTGM 339
++V+ LG G S +VP+M VL +C C+ AH+NP SK+RR N S+ + T +LVD GKT R+A LR FP GV +V +L+LTHDHADA G+DDLR++Q H E V + E + V+ + T + +F YL+ P+ A+ + P W P F FPV HG Y S GF FG FVYISDV IP + AFL +S PPI L++D + E H +H NL + + ++T++P+ T LTGM
Sbjct: 1 MEVVVLGCGPSSSVPSMRCVLNQNCVVCLEAHTNPDSKNRRLNPSLLVRNLKTDTN--------VLVDCGKTFREAALRIFPKIGVSAVHSLVLTHDHADALLGMDDLREVQA--HVETVDPVTKELYKIPPEAMKVHCSEPTSHEVIAKFPYLIDNEPAPPAGEAAPKPFRWTAKLQIDAFNP---WEPFEASGIKF---------LPFPVIHGAGYTSFGFEFGYEVGARFVYISDVSEIPDDTRAFLNDKSKPPIDVLLIDAL-YLEKYHSTHMNLQKVMEEIETIQPKRTLLTGM 276 The following BLAST results are available for this feature:
BLAST of EWM25621.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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