EWM25671.1, cds5002 (CDS) Nannochloropsis gaditana

Overview
NameEWM25671.1
Unique Namecds5002
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:929839..930414 -

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Properties
Property NameValue
Protein idEWM25671.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101185g1.10085.mrna
GbkeyCDS
End range.
End range930414
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:929839..930414 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25671.1 vs. NCBI_GenBank
Match: gi|585107511|gb|EWM25671.1| (hypothetical protein Naga_101185g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 373.244 bits (957), Expect = 1.285e-130
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0 
Query:    1 PYPAGKSSNQSATMWWSLPSLLITTLGFRRNGDTRKGREEEGGRGKTKGRRKRRKITFSLSDAARESGAGAFPPHHTTSFVDRDHIEITGVVGLFDDSGPTQVEVLPRSHSLPSSLPPSLPPSRPPSFPQPSSAPASSSDKESSSRITPPLTSHPQLHRPSSSSSSSSSSFSFVERLREWKKWGGGLAGSN 191
            PYPAGKSSNQSATMWWSLPSLLITTLGFRRNGDTRKGREEEGGRGKTKGRRKRRKITFSLSDAARESGAGAFPPHHTTSFVDRDHIEITGVVGLFDDSGPTQVEVLPRSHSLPSSLPPSLPPSRPPSFPQPSSAPASSSDKESSSRITPPLTSHPQLHRPSSSSSSSSSSFSFVERLREWKKWGGGLAGSN
Sbjct:    1 PYPAGKSSNQSATMWWSLPSLLITTLGFRRNGDTRKGREEEGGRGKTKGRRKRRKITFSLSDAARESGAGAFPPHHTTSFVDRDHIEITGVVGLFDDSGPTQVEVLPRSHSLPSSLPPSLPPSRPPSFPQPSSAPASSSDKESSSRITPPLTSHPQLHRPSSSSSSSSSSFSFVERLREWKKWGGGLAGSN 191
The following BLAST results are available for this feature:
BLAST of EWM25671.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107511|gb|EWM25671.1|1.285e-130100.00hypothetical protein Naga_101185g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5014rna5014Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications