EWM25692.1, cds4984 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25692.1 vs. NCBI_GenBank
Match: gi|585107546|gb|EWM25692.1| (s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana]) HSP 1 Score: 1100.5 bits (2845), Expect = 0.000e+0 Identity = 542/542 (100.00%), Postives = 542/542 (100.00%), Query Frame = 0 Query: 1 MVAVMASGRPVSYSPPPLPFKPRRCPHLLFLLAFILASSWITAAGATWSGIRHVSQRLSTNVVDLAPRAALSNGKSDASKVNRASTSRTPKTETAAIVPTESLTKLQSFFRQRNQRTEGIVPGKATGVPRVTLASQATSTCSSPARRRNHPRPSLPPSPSFSSPLVALAATISAPFRPRKGRAAAAATGSRWSPSSAPPSSFAFSSFLPTLPALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGAGELANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKGPREERREGGGWDAVKAWGRRKVPSLAPESDSPLSQPPLSEIFDEIEDAN 542 MVAVMASGRPVSYSPPPLPFKPRRCPHLLFLLAFILASSWITAAGATWSGIRHVSQRLSTNVVDLAPRAALSNGKSDASKVNRASTSRTPKTETAAIVPTESLTKLQSFFRQRNQRTEGIVPGKATGVPRVTLASQATSTCSSPARRRNHPRPSLPPSPSFSSPLVALAATISAPFRPRKGRAAAAATGSRWSPSSAPPSSFAFSSFLPTLPALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGAGELANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKGPREERREGGGWDAVKAWGRRKVPSLAPESDSPLSQPPLSEIFDEIEDAN Sbjct: 1 MVAVMASGRPVSYSPPPLPFKPRRCPHLLFLLAFILASSWITAAGATWSGIRHVSQRLSTNVVDLAPRAALSNGKSDASKVNRASTSRTPKTETAAIVPTESLTKLQSFFRQRNQRTEGIVPGKATGVPRVTLASQATSTCSSPARRRNHPRPSLPPSPSFSSPLVALAATISAPFRPRKGRAAAAATGSRWSPSSAPPSSFAFSSFLPTLPALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGAGELANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKGPREERREGGGWDAVKAWGRRKVPSLAPESDSPLSQPPLSEIFDEIEDAN 542
BLAST of EWM25692.1 vs. NCBI_GenBank
Match: gi|299469786|emb|CBN76640.1| (Putative mitochondrial carrier protein PET8 [Ectocarpus siliculosus]) HSP 1 Score: 331.643 bits (849), Expect = 2.618e-105 Identity = 163/273 (59.71%), Postives = 209/273 (76.56%), Query Frame = 0 Query: 220 LTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGAGE-LANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPE 491 LTFWG M+AGAVSRS AQT++HPANV+KTLLQTKG+ + L L+RGAGAQF LSLP+GAL FAVLE TKS ++ FP+ A DF S + +T +CSV+STPQMVLT+RIMAG YPNL GVR++++ G +G YAGW+ L QKIPSYGLTWV FQQ+K R +N ENF +G +AAA +V +MIP+DTVKTR+VTQ++ A+ V Y G+++CF+R+L+EEG+ +FY L+PRLVSVVPMIG+Q+ VYEFMKR +A +PE Sbjct: 125 LTFWGCMVAGAVSRSVAQTSLHPANVIKTLLQTKGSFRAILPLTWTTLSRGAGAQFLLSLPNGALHFAVLENTKSRMAEMFPLKTASFLLDFASCSAATALCSVMSTPQMVLTNRIMAGVYPNLWTGVRSIIQEKGARGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYRMAKRLPSNTENFWLGCIAAAGSVTIMIPMDTVKTRLVTQSS--ASTVMYSGIFNCFTRMLREEGVTSFYNSLSPRLVSVVPMIGVQYLVYEFMKRLMAEVPE 395
BLAST of EWM25692.1 vs. NCBI_GenBank
Match: gi|298707960|emb|CBJ30331.1| (mitochondrial energy transfer protein [Ectocarpus siliculosus]) HSP 1 Score: 324.324 bits (830), Expect = 5.560e-104 Identity = 167/278 (60.07%), Postives = 202/278 (72.66%), Query Frame = 0 Query: 226 MLAGAVSRSCAQTAMHPANVVKTLLQTKG-AGELANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNF---AGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKGPREERR 499 M AGAVSRS AQT M PANVVKTLLQ +G A +L+NL+ ++LTRGAGAQF +SLPHGA +A LE + FP + AGP DF+SS+V+T +CSV+STPQMVLTDRIMAG YPNL GVR + +T G+ G Y GW A +AQKIPSYGLTWVFFQQ K + D TN ENF +GA AA ATVC+MIP+DTVKTR+VTQ A A V YKGV +R+++EEGL Y L PRLVSVVPMIGIQFG+YEF+++ + M KG EE++ Sbjct: 1 MFAGAVSRSIAQTCMQPANVVKTLLQGRGTASQLSNLSFKLLTRGAGAQFVMSLPHGAFNYATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVREITRTQGLPGFYVGWSANVAQKIPSYGLTWVFFQQFKRLHRKATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQ-AGVVPYKGVLQTLTRIVREEGLGPIYRSLTPRLVSVVPMIGIQFGIYEFVRKEL--MNRKG--EEKK 273
BLAST of EWM25692.1 vs. NCBI_GenBank
Match: gi|1072225227|gb|OEU09974.1| (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 297.36 bits (760), Expect = 9.691e-93 Identity = 155/285 (54.39%), Postives = 188/285 (65.96%), Query Frame = 0 Query: 220 LTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQ-TKGAGELANLNV---QILTR---GAGAQFALSLPHGALAFAVLEATKSTLSSWFPVN--------FAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGM 489 L FW +M++GAVSRS AQT MHPAN +KT++Q T G L ++ Q+ R GAGA F LSLPHGA FAVLEA ++ +SS N GP DF+SSA++T CSV+STPQM++TD IMAG YPNL+ + GV G Y GW+ L KIPSY LTW FFQQLK RN D A N EN MG +A+AA VC+MIP+DT+KTR+VTQ A + YKG+ DC RV +EEG+ TFY L PRL+SVVPMIGIQFGVYE MKR + M Sbjct: 86 LYFWESMVSGAVSRSIAQTVMHPANTMKTMMQSTVGPSRLTLRDLIKPQMFRRLSVGAGANFILSLPHGAFNFAVLEAVRAQMSSLVESNPKLERNKEKMGPGLDFISSAIATICCSVVSTPQMMITDNIMAGNYPNLISASSGLYTDRGVMGFYTGWWPGLVGKIPSYALTWTFFQQLKRVRNIMSDRPAKNYENTIMGCVASAACVCIMIPMDTIKTRLVTQVA-MKGNIPYKGIIDCGLRVAREEGINTFYRGLTPRLMSVVPMIGIQFGVYEAMKREVTKM 369
BLAST of EWM25692.1 vs. NCBI_GenBank
Match: gi|873219052|emb|CEM38396.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 295.049 bits (754), Expect = 5.394e-91 Identity = 163/306 (53.27%), Postives = 202/306 (66.01%), Query Frame = 0 Query: 199 PSSFAFSSFLPTLPALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTK----GAGELANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKGPREERRE 500 P SF+ L +LP LH LTFWGNMLAGA+SRS AQTA+HP VKTLLQ + G G + I RGAGAQF +SLPHGA+ FAVL K ++ P+ AG FDF S A +T +CSVISTPQMVL DRI+ G YPNLV G+ +L+T+GV+GLY GWF + QKIPSY LTWV +QQL+ + + ++ ENF +GA AA V +MIP+DTVKTR+VTQA A YKG+ DCF RV+KEEG+ Y L RL+SVVPMIGIQFGVYE++K + P + + E Sbjct: 95 PMSFSLLDGL-SLP-LHDKGKLTFWGNMLAGALSRSVAQTAVHPLIGVKTLLQGRNTWQGWGYFLG-HPGIWWRGAGAQFLISLPHGAMNFAVLGFMKHQMTRLMPIKQAGFVFDFCSQASATFLCSVISTPQMVLVDRIVTGIYPNLVSGLSKLLRTEGVRGLYTGWFPGMIQKIPSYSLTWVAYQQLRNLHSVIFPRDPSDAENFLIGATAAGIVVAIMIPVDTVKTRLVTQATLGAVQ-PYKGIIDCFLRVIKEEGVGRLYRALPMRLMSVVPMIGIQFGVYEYVKSRLLSDPHMAVKHKPDE 396
BLAST of EWM25692.1 vs. NCBI_GenBank
Match: gi|223993253|ref|XP_002286310.1| (mitochondrial energy transfer protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220977625|gb|EED95951.1| mitochondrial energy transfer protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 285.804 bits (730), Expect = 1.121e-89 Identity = 150/272 (55.15%), Postives = 182/272 (66.91%), Query Frame = 0 Query: 222 FWGNMLAGAVSRSCAQTAMHPANVVKTLLQTK----GAGELANLNVQILTRGAGAQFALSLPHGALAFAVLE---------ATKSTLSSWFPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYE 480 FW M+ GA+SRS AQT MHPAN +KT+LQ+ G L+NL TRGAGAQ LS+PHGA+ FAVLE ++S + NF GP DF+SSA+ST CSV+STPQM++ D IMAG YPNLV ++K GV G Y GW+ +A KIPSYGLTW F+Q+K R R A + EN MG +A+A TVC+MIP+DTVKTR+VTQ P V YKG+ DCF RVL+EEG+ FY L PRL+SVVPMIGIQFGVYE Sbjct: 1 FWEAMICGAISRSAAQTIMHPANTMKTILQSSRSVPGKTPLSNL-----TRGAGAQLILSIPHGAVNFAVLEFVRRQMNNVVSQSRYADAINRNF-GPGMDFLSSALSTICCSVVSTPQMMICDNIMAGTYPNLVAATNGLMKDRGVAGFYTGWWPGIAGKIPSYGLTWTLFEQIKRVRTRMFKRPAKDIENSIMGCIASATTVCIMIPMDTVKTRLVTQMNYPDL-VAYKGINDCFRRVLQEEGIGAFYRGLTPRLLSVVPMIGIQFGVYE 265
BLAST of EWM25692.1 vs. NCBI_GenBank
Match: gi|397643593|gb|EJK75966.1| (hypothetical protein THAOC_02295 [Thalassiosira oceanica]) HSP 1 Score: 278.87 bits (712), Expect = 5.723e-85 Identity = 149/282 (52.84%), Postives = 184/282 (65.25%), Query Frame = 0 Query: 217 NKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTK----GAGELANLN------VQILTRGAGAQFALSLPHGALAFAVLE---------ATKSTLSSWFPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVY 479 + L FW M+ GA+SRS AQT MHPANV+KT+LQ+K G L + Q L+RGAGAQ LSLPHGA+ FAVLE +KS + NF G DF+SSA+ST CSV+STPQM++ D IMAG YPNL ++K GV G Y GW+ +A KIPSYGLTW F+Q+K R D A + EN MG +A+A TVCVMIP+DTVKTR+VTQ+ P V Y+G+ DCF R+++EEG+ FY L PRL+SVVPMIGIQFGVY Sbjct: 91 ERKLAFWEAMVCGAISRSTAQTIMHPANVMKTILQSKRTIPGQAPLTVASFTQWRYAQKLSRGAGAQLLLSLPHGAVNFAVLEFVRRQMHGLVSKSPYAEQINRNF-GAGMDFLSSAISTVCCSVVSTPQMMICDNIMAGTYPNLASATSNLIKDRGVAGFYTGWWPGIAGKIPSYGLTWTLFEQIKRIRATISDRPAMDLENSIMGCIASATTVCVMIPMDTVKTRLVTQSKFPDL-VPYEGINDCFRRIMQEEGVGAFYRGLTPRLLSVVPMIGIQFGVY 370
BLAST of EWM25692.1 vs. NCBI_GenBank
Match: gi|1210511598|dbj|GAX29412.1| (hypothetical protein FisN_16Hh148 [Fistulifera solaris]) HSP 1 Score: 263.462 bits (672), Expect = 8.920e-79 Identity = 149/277 (53.79%), Postives = 176/277 (63.54%), Query Frame = 0 Query: 220 LTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGAGELANL----NVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSW-----FPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWM-DHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTI 486 L FW NM+ GA+SRS AQT MHPAN KTLLQ+ L L+ GAGA LSLPHGA+ FAVLEA + L P +F PA DFVSS +ST CS +STPQMV+ D IMAG YP+L + + GV G Y GW L KIP+Y LTW FFQ+ K R R + D A+N EN MG+ A+A TVC+MIP+DT+KTR+VTQA YKG+ DC VL+EEGL +FY L PRLVSVVPMIGIQFGVYE MKR + Sbjct: 100 LVFWENMVCGAISRSVAQTVMHPANTCKTLLQSSPDYRFRELLKPSMFHRLSIGAGANLLLSLPHGAINFAVLEAVRHRLGKLAKQFHTPAHF-DPALDFVSSCISTISCSAVSTPQMVIMDNIMAGNYPHLAGAITQIHAKYGVAGFYRGWLPGLMGKIPAYALTWTFFQRFKNLRARLIPDRPASNIENSIMGSTASALTVCIMIPVDTIKTRLVTQAGR-VGPAKYKGIIDCARTVLREEGLVSFYRGLPPRLVSVVPMIGIQFGVYEAMKRIM 374
BLAST of EWM25692.1 vs. NCBI_GenBank
Match: gi|1210514831|dbj|GAX26310.1| (hypothetical protein FisN_16Lh148 [Fistulifera solaris]) HSP 1 Score: 263.462 bits (672), Expect = 2.385e-78 Identity = 149/277 (53.79%), Postives = 176/277 (63.54%), Query Frame = 0 Query: 220 LTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGAGELANL----NVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSW-----FPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWM-DHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTI 486 L FW NM+ GA+SRS AQT MHPAN KTLLQ+ L L+ GAGA LSLPHGA+ FAVLEA + L P +F PA DFVSS +ST CS +STPQMV+ D IMAG YP+L + + GV G Y GW L KIP+Y LTW FFQ+ K R R + D A+N EN MG+ A+A TVC+MIP+DT+KTR+VTQA YKG+ DC VL+EEGL +FY L PRLVSVVPMIGIQFGVYE MKR + Sbjct: 127 LVFWENMVCGAISRSVAQTVMHPANTCKTLLQSSPDYRFRELLKPSMFHRLSIGAGANLLLSLPHGAINFAVLEAVRHRLGKLAKRFDTPAHF-DPALDFVSSCISTISCSAVSTPQMVIMDNIMAGNYPHLAGAITQIHAKYGVAGFYRGWLPGLMGKIPAYALTWTFFQRFKNLRARLIPDRPASNIENSIMGSTASALTVCIMIPVDTIKTRLVTQAGR-VGPAKYKGIIDCARTVLREEGLVSFYRGLPPRLVSVVPMIGIQFGVYEAMKRIM 401
BLAST of EWM25692.1 vs. NCBI_GenBank
Match: gi|298710749|emb|CBJ32170.1| (mitochondrial energy transfer protein [Ectocarpus siliculosus]) HSP 1 Score: 223.402 bits (568), Expect = 2.091e-65 Identity = 111/211 (52.61%), Postives = 143/211 (67.77%), Query Frame = 0 Query: 268 RGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNF---AGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQ 475 RGAGAQF +SLPHGA +A LE + +FP ++ AGP DFV+S V+T +CSV+STPQ+V+ DRIM G YPNLV G R + +++G++G Y GW A ++QKIPSYGLTWVF+Q K + T E+F +GA+AA VCVM+PLDTV TR+VTQ A P V YKG + R++ EEGL Y+ L +LVSVVP IGIQ Sbjct: 20 RGAGAQFIMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRSEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGGAVCVMLPLDTVLTRVVTQRAQPGF-VPYKGAFRTLGRIVNEEGLGAMYSSLPAKLVSVVPAIGIQ 229 The following BLAST results are available for this feature:
BLAST of EWM25692.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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