EWM25690.1, cds4983 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25690.1 vs. NCBI_GenBank
Match: gi|585107544|gb|EWM25690.1| (nad-dependent epimerase dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 752.666 bits (1942), Expect = 0.000e+0 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0 Query: 1 MATNATSKYLVHFFLFFFFVLPTTVTFAFNLPRNPAHHSHVRCEMATRHASSTTASPSSPITSSPEASDGSTRRELLESYGRLGVGLGASALFPWIPSSALAASRPSSDAPVAVLGARGKTGRLIVQQLLAEGKQVRALSYQPFEYDAKKDLPVNVDLSLLTYAIGDVTKYDTLPDAIRGSSAVIFASSASKKGGNAQAVDCDGVENIARAAISEKIPRLLVISSGAVTKPDSFGYKITNMFARGIMGLKLEGEDRLRALYRSSAPAGVTYTVLRPGGLSNDKGLGVIGLELNQKDTIIGEISRNDVAAVAVHAITAPEAADVTFEVYEIGRRTPLQPEFPKESGMERRAEKWEDIFKGLVKDQDLQIA 369 MATNATSKYLVHFFLFFFFVLPTTVTFAFNLPRNPAHHSHVRCEMATRHASSTTASPSSPITSSPEASDGSTRRELLESYGRLGVGLGASALFPWIPSSALAASRPSSDAPVAVLGARGKTGRLIVQQLLAEGKQVRALSYQPFEYDAKKDLPVNVDLSLLTYAIGDVTKYDTLPDAIRGSSAVIFASSASKKGGNAQAVDCDGVENIARAAISEKIPRLLVISSGAVTKPDSFGYKITNMFARGIMGLKLEGEDRLRALYRSSAPAGVTYTVLRPGGLSNDKGLGVIGLELNQKDTIIGEISRNDVAAVAVHAITAPEAADVTFEVYEIGRRTPLQPEFPKESGMERRAEKWEDIFKGLVKDQDLQIA Sbjct: 1 MATNATSKYLVHFFLFFFFVLPTTVTFAFNLPRNPAHHSHVRCEMATRHASSTTASPSSPITSSPEASDGSTRRELLESYGRLGVGLGASALFPWIPSSALAASRPSSDAPVAVLGARGKTGRLIVQQLLAEGKQVRALSYQPFEYDAKKDLPVNVDLSLLTYAIGDVTKYDTLPDAIRGSSAVIFASSASKKGGNAQAVDCDGVENIARAAISEKIPRLLVISSGAVTKPDSFGYKITNMFARGIMGLKLEGEDRLRALYRSSAPAGVTYTVLRPGGLSNDKGLGVIGLELNQKDTIIGEISRNDVAAVAVHAITAPEAADVTFEVYEIGRRTPLQPEFPKESGMERRAEKWEDIFKGLVKDQDLQIA 369
BLAST of EWM25690.1 vs. NCBI_GenBank
Match: gi|298712437|emb|CBJ33213.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 237.269 bits (604), Expect = 1.578e-72 Identity = 131/269 (48.70%), Postives = 174/269 (64.68%), Query Frame = 0 Query: 92 LFPWIPSSALAASRPSSDAPVAVLGARGKTGRLIVQQLLAEGKQVRALSYQPFEYDAKKDLPVNVDLSLLTYAIGDVTKYDTLPDAIRGSSAVIFASSASKKGGNAQAVDCDGVENIARAAISEKIPRLLVISSGAVTKPDSFGYKITNMFARGIMGLKLEGEDRLRALYRSSAPAGVTYTVLRPGGLSNDKGLGVIGLELNQKDTIIGEISRNDVAAVAVHAITAPEAADVTFEVYEIGRRTPLQPEFPKESGMERRAEKWEDIFKGL 360 L + ++A A+ + +P+AV+GA GKTG+L V+ LL G+ VRA++ D+ L+T A GDVTK DTL A+ G AV+F +SASKKGGNA+AVD GV N A+A + IPRL+VISSGAVTKPDS G+K+TN+F IM LK +GE L +Y ++AP G+TYT++RPGGL++ +G G+ELNQ DTI G + R DVA V V A +P + FE+Y+ R PLQ PK SG ER E +E +FKGL Sbjct: 44 LLTGVDTAASASEPGTKQSPIAVVGAGGKTGKLAVEGLLKRGRNVRAVTRTGEFSLGGGDVG-----DLMTTAAGDVTKTDTLKQALAGCGAVLFCASASKKGGNAEAVDYQGVLNAAQACVELGIPRLVVISSGAVTKPDSLGFKVTNVFGN-IMTLKRKGEIGLEEIY-AAAPKGLTYTIVRPGGLTDGAVIGPAGIELNQGDTIGGTVGRGDVAEVVVEAALSPATENTIFEIYDKKSRGPLQGGLPKTSGYERTGESYEAMFKGL 305
BLAST of EWM25690.1 vs. NCBI_GenBank
Match: gi|873229694|emb|CEM12705.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 199.519 bits (506), Expect = 9.267e-58 Identity = 129/268 (48.13%), Postives = 169/268 (63.06%), Query Frame = 0 Query: 105 RPSSDAPVAVLGARGKTGRLIVQQLLAEGKQVRALSYQPFEYDAKKDLPVNVDLSLLTYAIGDVTKYDTLPDAIRGSSAVIFASSASKKGGNAQAVDCDGVENIARAAISEKIPRLLVISSGAVTKPDSFGYKITNMFA--RG-IMGLKLEGEDRLRALYRSSAPAGVTYTVLRPGGLSNDKGLGVIGLELNQKDTIIGEISRNDVAAVAVHAITAPEAADVTFEVYEIGRRTPLQPEFPKESGMERRAEKWEDIFKGLVKDQDLQIA 369 +PS+ A V VLGA G+TGRLIV+ L EG+ VRA + P P L++ + DV ++ +RG S VIFA+SASK GG A AVD GVEN+A+A + E + RL+++SSGAVT+PDS GYK+TN +G IMG K +GED LRALY+SSA +YT++RPGGL + + G LE+NQ D EI R DVAA AV A+ +P VT EVY+ R PL+ FP SG ERR ++++F GL DQ+LQ A Sbjct: 57 KPSA-ASVCVLGAGGRTGRLIVELLAQEGRAVRAGTRGP---------PPASSSDLVSTSAIDVKDLPSVRQGVRGCSGVIFAASASKAGGKAAAVDYLGVENVAKACLEEGVERLVLLSSGAVTRPDSVGYKLTNFLTLDKGDIMGNKRKGEDALRALYKSSAKPNQSYTIIRPGGLRDAEPAGPSQLEINQGDYFFSEIPRADVAATAVSALFSPYTRGVTMEVYKAEGRFPLEGGFPPNSGFERRGNSFDELFSGLKSDQELQAA 314
BLAST of EWM25690.1 vs. NCBI_GenBank
Match: gi|551644502|ref|XP_005825042.1| (hypothetical protein GUITHDRAFT_89487 [Guillardia theta CCMP2712] >gi|428169125|gb|EKX38062.1| hypothetical protein GUITHDRAFT_89487 [Guillardia theta CCMP2712]) HSP 1 Score: 189.504 bits (480), Expect = 4.426e-54 Identity = 112/271 (41.33%), Postives = 161/271 (59.41%), Query Frame = 0 Query: 112 VAVLGARGKTGRLIVQQLLAEGKQVRALSYQPFEYDAKKDLPVNVDLSLLTYAIGDVTKYDTLPDAIRGSSAVIFASSASKKGGNAQAVDCDGVENIARAAISEKIPRLLVISSGAVTKPDSFGYKITNMFARGIMGLKLEGEDRLRALYRSSAPA----GVTYTVLRPGGLSNDKGLGVIGLELNQKDTIIGEISRNDVAAVAVHAITAPEAADVTFEVYEIGRRTPLQPE-----FPKE----------SGMERRAEKWEDIFKGLVKD 363 +AV+GA G TG+ V L+ G VRA+ + KD + D SL++ IGD+T DTL D+++G A+IFA+SASKKGG+ + VD G+ N A+ I + I RL+V+SSGAV++PDS YK N+F IM K++GE+ ++ +Y+S+ +YT++RPGGL+ LGV +ELNQ DT G I+R DVA + V +I + +AAD TFE Y PL+ F K+ +G ER+A+ W +F GL KD Sbjct: 33 IAVVGASGGTGKECVNALVRRGIPVRAI-IRAKTNSKGKDFVLEGDSSLVSEVIGDITSPDTLRDSLKGCKALIFAASASKKGGDPKQVDYQGLLNCAQLCIDQNIERLVVVSSGAVSRPDSAVYKFLNLFGS-IMYWKIQGENEMKGMYKSAREKNPSFACSYTIVRPGGLTEGAALGVSSVELNQGDTKSGRIARADVAEICVESIFSKDAADTTFECYYKDTAKPLEGVGLSNLFKKKTSDTEAQSIMTGKERQADSWPKLFAGLDKD 301
BLAST of EWM25690.1 vs. NCBI_GenBank
Match: gi|299115202|emb|CBN74033.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 185.652 bits (470), Expect = 8.999e-52 Identity = 141/360 (39.17%), Postives = 190/360 (52.78%), Query Frame = 0 Query: 36 AHHSHVRCEMATRHASSTTASPSSPITS-----SPEASDGS-------TRRELLESYGRLGVGLGASA-LFPWIPSSALAASRPSSDAPVAVLGARGKTGRLIVQQLLAEGKQVRALSY-------QPFEYDAKKDLPVNVDLSLLTYAIGDVTKYDTLPDAIRGSSAVIFASSASKKGGNAQAVDCDGVENIARAAISEKIPRLLVISSGAVTKPDSFGYKITNMFARGIMGLKLEGEDRLRALYRSSAPAGVTYTVLRPGGLSNDKGLGVIGLELNQKDTIIGEISRNDVAAVAVHAITAPEAADVTFEVYEIGRRTPLQP------------EFPKESGMERRAEKWEDIFKGLVKD 363 A SHV + A++T S S IT+ SP D + +R E L R+G L A A +F A AA+ SSD V VLGA GKTGR V+ L ++G VRA++ +P + K + T DVT +LP I+G+SAVIFASSASK+GG+A+AVD +GV N+A+A + K+PRL+V+SSG V P+S YK N+F IM K++GED+LR++Y +A YT++RPGGL+ D GV +ELNQ DT G I+R DVA V V +I + A D T E Y PL + K G E + W+ +F GL D Sbjct: 33 AARSHVTHRQ--QRATATGRSSGSSITTMRATPSPGGDDDTAGIPASMSRGEWL----RVGASLAAMAPVFALGKEDASAAT--SSD--VTVLGAGGKTGRECVEYLASKGTGVRAVARSLTNKEGEPLAFTTTKGI---------TMETADVTVPSSLPGVIKGASAVIFASSASKQGGSAKAVDYEGVVNVAKACLEAKVPRLVVVSSGGVATPESSIYKFLNLFGE-IMSWKIQGEDQLRSMY--AAQDVCHYTIVRPGGLTLDPPRGVGAIELNQGDTKSGRIARADVARVCVESIYSRNAEDCTLECYYKDTAKPLAAVGVSNILKQKTDDTAKSFGTESTGDTWDALFSGLKHD 370
BLAST of EWM25690.1 vs. NCBI_GenBank
Match: gi|219122791|ref|XP_002181722.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406998|gb|EEC46936.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 172.555 bits (436), Expect = 7.632e-47 Identity = 113/269 (42.01%), Postives = 150/269 (55.76%), Query Frame = 0 Query: 110 APVAVLGARGKTGRLIVQQLLAEGKQVRALSYQ-PFEYDAKKDLPVNVDLSLLTYAIGDVTKYDTLPDAIRGSSAVIFASSASKKGGNAQAVDCDGVENIARAAISEKIPRLLVISSGAVTKPDSFGYKITNMFARGIMGLKLEGEDRLRALYRSSAPA-GVTYTVLRPGGLSNDKGLGVIGLELNQKDTIIGEISRNDVAAVAVHAITAPEAAD-VTFEVYEIGRRTPL----------QPEFPKE--SGMERRAEKWEDIFKGLVKD 363 +P+ V+GA G+TG VQ + G VRA S + D+ L ++LL DVTK T+ AI AVIF +SASK GG VD DG+ N+ARA +++KIP L+V+SSGAVTKP+S ++ N+F + IM K++GED +R LY S + YTV+RPGGL+ D GV LELNQ DT G I+R DVAA+ + A P TFE Y+ PL Q P + SG E E +E +F GL +D Sbjct: 107 SPICVIGANGRTGSQCVQACVERGIPVRATSRSGTYNGDSSSKL-----VALLPC---DVTKPATISRAIERCQAVIFCASASKNGGTPSQVDNDGLVNVARACLAQKIPHLVVVSSGAVTKPNSPVFQFLNLFGK-IMEEKIKGEDEVRRLYSMSGNQPSLVYTVIRPGGLTEDAPRGVTALELNQGDTKSGRIARADVAALCIEATRYPGLTGFATFECYDSDTGKPLSTVGISNILKQKAAPADFTSGTEHVGETFEKLFTGLQRD 366
BLAST of EWM25690.1 vs. NCBI_GenBank
Match: gi|1210524363|dbj|GAX17092.1| (hypothetical protein FisN_5Hh478 [Fistulifera solaris]) HSP 1 Score: 163.696 bits (413), Expect = 2.401e-43 Identity = 116/319 (36.36%), Postives = 179/319 (56.11%), Query Frame = 0 Query: 60 PITSSPEASDGSTRRELLESYGRLGVGLGASALFPWIPSSALAASRPSSDAPVAVLGARGKTGRLIVQQLLAEGKQVRALSYQPFEYDAKKDLPVNVDLSLLTYAIGDVTKYDTLPDAIRGSSAVIFASSAS--KKGGNAQAVDCDGVENIARAAISEKIPRLLVISSGAVTKPDSFGYKITNMFAR-----GIMGLKLEGEDRLRALYRSSAPAGVTYTVLRPGGLSNDKGLGVIGLELNQKDTIIGEISRNDVAAVAVHAITAPEAAD-VTFEV-YEIGRRTPLQ--PEFPKESGMERRAEKWEDIFKGLVKDQDLQ 367 P + +SD +RR+L + + VG+ AS +F + ++A S D+P+ VLGA GK G+L + L +G VRA + +K+ P ++YA DVT+ ++L ++++G+S VIFA+SAS KKGG AVD GV N A+A + +K+ +L+V+S+ T+PDS G+K TN F + IM K+ GE +R LY S+ G Y V+RPGGL++ K +G + ++Q D EISR DVA V V + A D VTFE+ E G L+ P+ P E + A ++ + GL+ D+ ++ Sbjct: 44 PFMQADASSDAISRRDL---FSQAIVGVTASMMFSQVANAAEGGIGSSPDSPIVVLGAGGKVGKLCTEILANKGLYVRATTRSGRSI-LEKESP------FVSYAQADVTQLESLENSVKGASGVIFAASASGKKKGGEPVAVDYLGVYNAAKACLDQKVSKLVVVSAATATRPDSLGFKATNYFVKFVYGDRIMDSKIAGEAAMRDLYASAGSKG--YAVVRPGGLNDKKSVGSAKVHVSQGDVYASEISREDVALVTVATLLKGAATDGVTFELNQEEGLAKALKDLPDPPAEL-VHAGAPSFDALLDGLLTDEQIK 349
BLAST of EWM25690.1 vs. NCBI_GenBank
Match: gi|255083679|ref|XP_002508414.1| (hypothetical protein MICPUN_108991 [Micromonas commoda] >gi|226523691|gb|ACO69672.1| hypothetical protein MICPUN_108991 [Micromonas commoda]) HSP 1 Score: 155.992 bits (393), Expect = 6.800e-41 Identity = 108/272 (39.71%), Postives = 142/272 (52.21%), Query Frame = 0 Query: 112 VAVLGARGKTGRLIVQQLLAEGKQV----RALSYQPFEYDAKKDLPVNVDLSLLTYAIGDVTKYDT--LPDAIRGSSAVIFASSASKKGGNAQAVDCDGVENIARAAISEKIPRLLVISSGAVTKPDSFGYKITNMFARGIMGLKLEGEDRLRALYRSSAPAGVTYTVLRPGGLSNDKGLGVIGLELNQKDTIIGEISRNDVAAVAVHAITAPEAA--DVTFEVYEIGRRTPL------------QPEFPKESGMERRAEKWEDIFKGLVKD 363 + V G+ GKTG VQ G V R+ S+ P + D + SL+T A GDV K L ++G+ A IFA+SAS GG+ Q VD G+ +ARA I+ +PRL+++SSG+V+KP S Y N+F GIM K+EGED +R+LY G Y V+RPGGL+ D+ GV +ELNQ D G ISR+DVAA+ V A + TFE Y L + SGMERR W +IF GL D Sbjct: 55 IVVFGSNGKTGARCVQYAARAGIPVTACTRSGSWSPQNINLTSD-----ERSLVTAAAGDVAKASAAELTSTLQGAGACIFAASASPSGGSPQDVDKAGLVAVARACIAANVPRLVIVSSGSVSKPLSPVYVFLNLFG-GIMRAKIEGEDAVRSLYFKR--DGADYVVVRPGGLTEDEPRGVGAIELNQGDDKSGRISRSDVAAICVEAAVGANGCVGNSTFECYWADSAKGLDAVGFSNMMGGTNTDGDYVSGMERRGNTWNEIFAGLKAD 318
BLAST of EWM25690.1 vs. NCBI_GenBank
Match: gi|308807358|ref|XP_003080990.1| (Predicted dehydrogenase (ISS) [Ostreococcus tauri]) HSP 1 Score: 155.221 bits (391), Expect = 6.913e-41 Identity = 107/282 (37.94%), Postives = 148/282 (52.48%), Query Frame = 0 Query: 97 PSSALAASRPSSDAPVAVLGARGKTGRLIVQQLLA--EGKQVRALSYQPFEYDAKKDLPVNVDLSLLTYAIGDVTKYDTLPDAIRGSSAVIFASSASKKGGNAQAVDCDGVENIARAAISEKIPRLLVISSGAVTKPDSFGYKITNMFARGIMGLKLEGEDRLRALYRSSAPAGVTYTVLRPGGLSNDKGLGVIGLELNQKDTIIGEISRNDVAAVAVHAITAPEAADVTFEVYEIGRRTPL-------------QPEFPKESGMERRAEKWEDIFKGLVKD 363 PS++LA+ + V V+GA GKTGR V+ L + + K++ A + D V + + L + G+ AVIFA+S S+ GG A VD DGV ARA + + R +++SSGAV+KP S Y N+F GIM K+ GED +RALY G YTV+RPGGLS D GV LELNQ D + G ISR DVAA+ + +I+ +AA+ TFE Y PL + +++G ERR W+++F GL D Sbjct: 25 PSASLASDK------VVVIGANGKTGRRCVEYLRSSTDAKEIVACTRSGTYEGGAADDRVKARAANVA-----SASVAELANEFAGAKAVIFAASQSQSGGTASQVDRDGVITCARACLRAGVERFVIVSSGAVSKPASPVYIFLNLFG-GIMRNKILGEDAVRALYFDRP--GQFYTVVRPGGLSEDPARGVSALELNQGDEMSGRISREDVAAICIESISREDAANATFECYNWDAAKPLGEVGLSNMMKATNDGDGVQKTGSERRGSSWDELFAGLRAD 292
BLAST of EWM25690.1 vs. NCBI_GenBank
Match: gi|693498993|emb|CEG01640.1| (NAD(P)-binding domain [Ostreococcus tauri]) HSP 1 Score: 155.606 bits (392), Expect = 7.635e-41 Identity = 107/282 (37.94%), Postives = 148/282 (52.48%), Query Frame = 0 Query: 97 PSSALAASRPSSDAPVAVLGARGKTGRLIVQQLLA--EGKQVRALSYQPFEYDAKKDLPVNVDLSLLTYAIGDVTKYDTLPDAIRGSSAVIFASSASKKGGNAQAVDCDGVENIARAAISEKIPRLLVISSGAVTKPDSFGYKITNMFARGIMGLKLEGEDRLRALYRSSAPAGVTYTVLRPGGLSNDKGLGVIGLELNQKDTIIGEISRNDVAAVAVHAITAPEAADVTFEVYEIGRRTPL-------------QPEFPKESGMERRAEKWEDIFKGLVKD 363 PS++LA+ + V V+GA GKTGR V+ L + + K++ A + D V + + L + G+ AVIFA+S S+ GG A VD DGV ARA + + R +++SSGAV+KP S Y N+F GIM K+ GED +RALY G YTV+RPGGLS D GV LELNQ D + G ISR DVAA+ + +I+ +AA+ TFE Y PL + +++G ERR W+++F GL D Sbjct: 44 PSASLASDK------VVVIGANGKTGRRCVEYLRSSTDAKEIVACTRSGTYEGGAADDRVKARAANVA-----SASVAELANEFAGAKAVIFAASQSQSGGTASQVDRDGVITCARACLRAGVERFVIVSSGAVSKPASPVYIFLNLFG-GIMRNKILGEDAVRALYFDRP--GQFYTVVRPGGLSEDPARGVSALELNQGDEMSGRISREDVAAICIESISREDAANATFECYNWDAAKPLGEVGLSNMMKATNDGDGVQKTGSERRGSSWDELFAGLRAD 311 The following BLAST results are available for this feature:
BLAST of EWM25690.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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