EWM25722.1, cds4949 (CDS) Nannochloropsis gaditana

Overview
NameEWM25722.1
Unique Namecds4949
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:778041..778097 +
Alignment locationCM002464.1:778320..778829 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25722.1
Productprotein kinase domain containing protein
Orig transcript idgnl|cribi|Naga_100154g1.6620.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:778041..778097 +
CM002464.1supercontigCM002464.1:778320..778829 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
BLAST of EWM25722.1 vs. NCBI_GenBank
Match: gi|585107582|gb|EWM25722.1| (protein kinase domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 389.423 bits (999), Expect = 3.640e-137
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
Query:    1 MHCDVKPENIVVKSYSRVEVKLIDFGSSCFVSDPPTSYLQSRSYRAPEVVLGAAYTGKIDVWSVGCVLAELLTGYVLFQSENIQGMLARMQAILGSFPEDLLLFGTETTKYFTSALVVYRREGGEEGRVGGYEEGDGAVSLLHPKKSNLAARIRTDDALFLDFIRALLSIHPDQRPTAAEALNHPWLM 188
            MHCDVKPENIVVKSYSRVEVKLIDFGSSCFVSDPPTSYLQSRSYRAPEVVLGAAYTGKIDVWSVGCVLAELLTGYVLFQSENIQGMLARMQAILGSFPEDLLLFGTETTKYFTSALVVYRREGGEEGRVGGYEEGDGAVSLLHPKKSNLAARIRTDDALFLDFIRALLSIHPDQRPTAAEALNHPWLM
Sbjct:    1 MHCDVKPENIVVKSYSRVEVKLIDFGSSCFVSDPPTSYLQSRSYRAPEVVLGAAYTGKIDVWSVGCVLAELLTGYVLFQSENIQGMLARMQAILGSFPEDLLLFGTETTKYFTSALVVYRREGGEEGRVGGYEEGDGAVSLLHPKKSNLAARIRTDDALFLDFIRALLSIHPDQRPTAAEALNHPWLM 188          
BLAST of EWM25722.1 vs. NCBI_GenBank
Match: gi|471227422|ref|XP_004034624.1| (protein kinase domain protein [Ichthyophthirius multifiliis] >gi|340504718|gb|EGR31138.1| protein kinase domain protein [Ichthyophthirius multifiliis])

HSP 1 Score: 213.772 bits (543), Expect = 9.178e-65
Identity = 97/197 (49.24%), Postives = 142/197 (72.08%), Query Frame = 0
Query:    1 MHCDVKPENIVVKSYSRVEVKLIDFGSSCFVSDPPTSYLQSRSYRAPEVVLGAAYTGKIDVWSVGCVLAELLTGYVLFQSENIQGMLARMQAILGSFPEDLLLFGTETTKYFTSALVVYR--REGGEEGR-------VGGYEE-GDGAVSLLHPKKSNLAARIRTDDALFLDFIRALLSIHPDQRPTAAEALNHPWL 187
            +HCD+KPENI++KSYS+ ++K+IDFGSSCF+ D  +SY+QSRSYRAPEV++G  Y  KID+WS+GC+LAEL TG VLFQ++ +QG+LAR+  I+G  PE +   G     +FT+  ++Y+   E G++ +       +GG  +   G + +L PK++NL  R++TDD +FLDF++ LL I   +RP+A EALNHPW+
Sbjct:  214 IHCDLKPENILIKSYSKCQIKIIDFGSSCFIHDHLSSYVQSRSYRAPEVIIGCKYDYKIDIWSLGCILAELWTGNVLFQNDTVQGLLARVIGIIGPIPEWMFQEGRLVNNFFTNKRLLYQDVMEDGDQSQNINDTSDMGGKRKTKSGKIQILVPKRTNLKKRLKTDDIMFLDFVKQLLQIDRTRRPSAKEALNHPWI 410          
BLAST of EWM25722.1 vs. NCBI_GenBank
Match: gi|145500494|ref|XP_001436230.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124403369|emb|CAK68833.1| unnamed protein product [Paramecium tetraurelia])

HSP 1 Score: 219.935 bits (559), Expect = 1.355e-64
Identity = 96/187 (51.34%), Postives = 138/187 (73.80%), Query Frame = 0
Query:    1 MHCDVKPENIVVKSYSRVEVKLIDFGSSCFVSDPPTSYLQSRSYRAPEVVLGAAYTGKIDVWSVGCVLAELLTGYVLFQSENIQGMLARMQAILGSFPEDLLLFGTETTKYFTSALVVYRREGGEEGRVGGYEEGDGAVSLLHPKKSNLAARIRTDDALFLDFIRALLSIHPDQRPTAAEALNHPWL 187
            +HCD+KPENI+++S S+ E K+IDFGSSCF+ D  +SY+QSRSYRAPEV++G  Y  KID+WS+GC+LAEL TG+VLFQ++ +QG+LAR+  I+G FPE ++  G    ++FT   ++Y+    ++     + +  G + +L PKKSNL AR++TDD  FLDF++ LL I P +RP+A +ALNHPW 
Sbjct:  508 IHCDLKPENILMRSISKCECKVIDFGSSCFIHDHLSSYVQSRSYRAPEVIIGCKYDYKIDMWSLGCILAELWTGFVLFQNDTVQGLLARVIGIIGPFPEYMMKEGRLVNQFFTKEKLLYQNAMEDQ----QHHQNSGLIQILVPKKSNLKARLKTDDMFFLDFVKQLLHIDPSKRPSAKDALNHPWF 690          
BLAST of EWM25722.1 vs. NCBI_GenBank
Match: gi|922855281|gb|KOO23743.1| (protein kinase domain-containing protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 217.624 bits (553), Expect = 9.719e-64
Identity = 104/187 (55.61%), Postives = 136/187 (72.73%), Query Frame = 0
Query:    1 MHCDVKPENIVVKSYSRVEVKLIDFGSSCFVSDPPTSYLQSRSYRAPEVVLGAAYTGKIDVWSVGCVLAELLTGYVLFQSENIQGMLARMQAILGSFPEDLLLFGTETTKYFTSALVVYRREGGEEGRVGGYEEGDGAVSLLHPKKSNLAARIRTDDALFLDFIRALLSIHPDQRPTAAEALNHPWL 187
            +HCD+KPENI++KSYSR EVK+IDFGSSC+++D  +SY+QSRSYRAPEV+LG  Y GKID+WS+G +LAELLTGYVLFQ++++  MLAR+ AI+G FPE  L  G  + KYF   + VY R+  E+              LL PK+++L  R  TDD LFL F+ +LL I P++RPTA +AL HPWL
Sbjct:  511 IHCDLKPENILIKSYSRCEVKVIDFGSSCYLTDHLSSYVQSRSYRAPEVILGLQYDGKIDIWSLGAILAELLTGYVLFQNDSVASMLARISAIVGPFPEAFLAKGRHSHKYFVDGM-VYERDRDEQP------------FLLRPKQTSLKHRCHTDDKLFLSFVGSLLRIDPEERPTAEQALQHPWL 684          
BLAST of EWM25722.1 vs. NCBI_GenBank
Match: gi|551630109|ref|XP_005818013.1| (hypothetical protein GUITHDRAFT_83483, partial [Guillardia theta CCMP2712] >gi|428161762|gb|EKX31033.1| hypothetical protein GUITHDRAFT_83483, partial [Guillardia theta CCMP2712])

HSP 1 Score: 207.994 bits (528), Expect = 1.426e-63
Identity = 95/187 (50.80%), Postives = 135/187 (72.19%), Query Frame = 0
Query:    1 MHCDVKPENIVVKSYSRVEVKLIDFGSSCFVSDPPTSYLQSRSYRAPEVVLGAAYTGKIDVWSVGCVLAELLTGYVLFQSENIQGMLARMQAILGSFPEDLLLFGTETTKYFTSALVVYRREGGEEGRVGGYEEGDGAVSLLHPKKSNLAARIRTDDALFLDFIRALLSIHPDQRPTAAEALNHPWL 187
            +HCD+KPENI+++SYSR E+K+IDFGSSCF++D  TSY+QSRSYRAPEV+LG  Y  +ID+WS+GC+LAEL TG VLFQ++++  +LAR+  ILG   E++L  G  T ++FT   ++Y R            + +G++  + PKK+ L  R+ TDD LF+DFI  LL ++P +R TA +AL+HPWL
Sbjct:  144 IHCDLKPENILIRSYSRCEIKIIDFGSSCFITDHLTSYVQSRSYRAPEVILGLPYDQQIDMWSLGCILAELWTGRVLFQNDSLATLLARVVGILGGIEENMLFQGRYTHRFFTKTKIIYDR----------LSDDNGSLVYIFPKKTTLRHRLGTDDELFIDFIDKLLQVNPTKRFTAEQALHHPWL 320          
BLAST of EWM25722.1 vs. NCBI_GenBank
Match: gi|829168590|ref|XP_001015329.3| (Serine/Threonine kinase domain protein [Tetrahymena thermophila SB210] >gi|586738711|gb|EAR95084.3| Serine/Threonine kinase domain protein (macronuclear) [Tetrahymena thermophila SB210])

HSP 1 Score: 218.394 bits (555), Expect = 1.708e-63
Identity = 102/196 (52.04%), Postives = 141/196 (71.94%), Query Frame = 0
Query:    1 MHCDVKPENIVVKSYSRVEVKLIDFGSSCFVSDPPTSYLQSRSYRAPEVVLGAAYTGKIDVWSVGCVLAELLTGYVLFQSENIQGMLARMQAILGSFPEDLLLFGTETTKYFTSALVVYRR--EGGEEGR-------VGGYEEGDGAVSLLHPKKSNLAARIRTDDALFLDFIRALLSIHPDQRPTAAEALNHPWL 187
            +HCD+KPENI++KSYS+ +VK+IDFGSSCF+ D  +SY+QSRSYRAPEV+LG  Y  KID+WS+GC+LAEL TG VLFQ++ +QG+LAR+  I+G  PE +   G     +FT+  ++Y+   E GE  +       + G  +  G + +L PKKSNL AR++TDD +FLDF+++LL I   +RP+A EAL HPWL
Sbjct:  571 IHCDLKPENILMKSYSKCQVKIIDFGSSCFIHDHLSSYVQSRSYRAPEVILGCKYDYKIDMWSLGCILAELWTGNVLFQNDTVQGLLARVIGIIGPIPEWMFQEGRLVNNFFTNKRLLYQDVFEEGEPSQNINDTSDMPGRRQKSGKIQILVPKKSNLRARLKTDDLMFLDFVKSLLQIDRTRRPSAKEALQHPWL 766          
BLAST of EWM25722.1 vs. NCBI_GenBank
Match: gi|145526799|ref|XP_001449205.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124416782|emb|CAK81808.1| unnamed protein product (macronuclear) [Paramecium tetraurelia])

HSP 1 Score: 215.312 bits (547), Expect = 1.170e-62
Identity = 99/198 (50.00%), Postives = 138/198 (69.70%), Query Frame = 0
Query:    1 MHCDVKPENIVVKSYSRVEVKLIDFGSSCFVSDPPTSYLQSRSYRAPEVVLGAAYTGKIDVWSVGCVLAELLTGYVLFQSENIQGMLARMQAILGSFPEDLLLFGTETTKYFTSALVVYRREGGEEGRVGGYEEGD-----------GAVSLLHPKKSNLAARIRTDDALFLDFIRALLSIHPDQRPTAAEALNHPWL 187
            +HCD+KPENI+++S S+ E K+IDFGSSCF+ D  +SY+QSRSYRAPEV++G  Y  KID+WS+GC+LAEL TGYVLFQ++ +QG+LAR+  I+G FPE+++  G    ++FT   ++Y  +   E +   Y   D           G + +L PKKSNL AR++TDD  FLDF++ LL I P +RP+A +AL HPW 
Sbjct:  519 IHCDLKPENILMRSISKCECKVIDFGSSCFIHDHLSSYVQSRSYRAPEVIIGCKYDYKIDMWSLGCILAELWTGYVLFQNDTVQGLLARVIGIIGPFPENMMKEGRLVNQFFTKEKLLY--QDAMEDQQQHYPNPDMSDASVKRKKTGLIQILVPKKSNLKARLKTDDMFFLDFVKQLLHIDPSKRPSAKDALYHPWF 714          
BLAST of EWM25722.1 vs. NCBI_GenBank
Match: gi|674230019|gb|KFK23804.1| (hypothetical protein AALP_AAs43167U000100, partial [Arabis alpina])

HSP 1 Score: 197.978 bits (502), Expect = 2.153e-61
Identity = 96/187 (51.34%), Postives = 128/187 (68.45%), Query Frame = 0
Query:    1 MHCDVKPENIVVKSYSRVEVKLIDFGSSCFVSDPPTSYLQSRSYRAPEVVLGAAYTGKIDVWSVGCVLAELLTGYVLFQSENIQGMLARMQAILGSFPEDLLLFGTETTKYFTSALVVYRREGGEEGRVGGYEEGDGAVSLLHPKKSNLAARIRTDDALFLDFIRALLSIHPDQRPTAAEALNHPWL 187
            +HCD+KPENI+VKSYSR E+K+ID GSSCF +D   SY+QSRSYRAPEV+LG  Y  KIDVWS+GC+LAEL TG VLFQ+++   +LAR+  I+GSF  ++L  G ++ KYFT   ++Y R            +    +  L PK+++L  R+   D  F DF+  LL I+P +RP+AAEAL HPWL
Sbjct:    3 IHCDLKPENILVKSYSRCEIKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDVWSLGCILAELCTGNVLFQNDSPASLLARVMGIIGSFDHEMLTKGRDSHKYFTKNRMLYER-----------NQESNRLEYLIPKRTSLRHRLPMGDQGFTDFVAHLLEINPKKRPSAAEALKHPWL 178          
BLAST of EWM25722.1 vs. NCBI_GenBank
Match: gi|471222136|ref|XP_004029873.1| (protein kinase domain protein, partial [Ichthyophthirius multifiliis] >gi|340501907|gb|EGR28637.1| protein kinase domain protein, partial [Ichthyophthirius multifiliis])

HSP 1 Score: 208.379 bits (529), Expect = 2.682e-61
Identity = 97/203 (47.78%), Postives = 139/203 (68.47%), Query Frame = 0
Query:    1 MHCDVKPENIVVKSYSRVEVKLIDFGSSCFVSDPPTSYLQSRSYRAPEVVLGAAYTGKIDVWSVGCVLAELLTGYVLFQSENIQGMLARMQAILGSFPEDLL--------LFGTETTKY------FTSALVVYRREGGEEGR--VGGYEEGDGAVSLLHPKKSNLAARIRTDDALFLDFIRALLSIHPDQRPTAAEALNHPWL 187
            +HCD+KPENI++KSYS+ EVK+IDFGSSCF+ D  +SY+QSRSYRAPEV++G  Y  +ID+WS+GC+L+EL  G VLFQ++NIQGMLAR+  I+G FPE ++        LF  E   Y      F S+  +Y++   ++    +   ++  G + +  PKK+NL +R++ DD LFLDF+R LL +   +RPTA EA++H W 
Sbjct:  340 IHCDLKPENILMKSYSKAEVKIIDFGSSCFIHDHLSSYVQSRSYRAPEVIIGCKYDYRIDMWSLGCILSELYNGQVLFQNDNIQGMLARIIGIIGPFPEWMMKEGKLVHNLFTREKLIYMEVFYFFCSS--IYQKVQNQKSSEIINKQKQKSGKIQIFVPKKTNLKSRLKIDDNLFLDFLRQLLQLDYTRRPTAKEAMSHLWF 540          
BLAST of EWM25722.1 vs. NCBI_GenBank
Match: gi|678313215|emb|CDW87975.1| (protein kinase domain containing protein [Stylonychia lemnae])

HSP 1 Score: 214.927 bits (546), Expect = 2.717e-61
Identity = 100/203 (49.26%), Postives = 141/203 (69.46%), Query Frame = 0
Query:    1 MHCDVKPENIVVKSYSRVEVKLIDFGSSCFVSDPPTSYLQSRSYRAPEVVLGAAYTGKIDVWSVGCVLAELLTGYVLFQSENIQGMLARMQAILGSFPEDLLLFGTETTKYFTSALVVYRREGG----------------EEGRVGGYEEGDGAVSLLHPKKSNLAARIRTDDALFLDFIRALLSIHPDQRPTAAEALNHPWL 187
            +HCD+KPENI++KSYSR EVK+IDFGSSCF+ D  +SY+QSRSYRAPEV+LG  Y  KID+WS+GC+LAEL TGYVLFQ++++QG+LAR+  I+G  PE ++  G   + +FT   ++Y +EGG                ++ + G  E  +  +++L PK + L  R++ DD  F+DF+R LL I P +RP+A EA+ HPWL
Sbjct:  826 IHCDLKPENILIKSYSRCEVKVIDFGSSCFIHDHLSSYVQSRSYRAPEVILGCRYDYKIDMWSLGCILAELYTGYVLFQNDSVQGLLARVLGIIGPVPEYMMKEGRLVSSFFTREGLIY-QEGGNDDEQESQNVSDSSRAQQKKKGRGENDELKINILVPKMTTLKHRLKCDDPYFIDFVRWLLEIDPTKRPSAKEAMQHPWL 1027          
The following BLAST results are available for this feature:
BLAST of EWM25722.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107582|gb|EWM25722.1|3.640e-137100.00protein kinase domain containing protein [Nannochl... [more]
gi|471227422|ref|XP_004034624.1|9.178e-6549.24protein kinase domain protein [Ichthyophthirius mu... [more]
gi|145500494|ref|XP_001436230.1|1.355e-6451.34hypothetical protein [Paramecium tetraurelia strai... [more]
gi|922855281|gb|KOO23743.1|9.719e-6455.61protein kinase domain-containing protein [Chrysoch... [more]
gi|551630109|ref|XP_005818013.1|1.426e-6350.80hypothetical protein GUITHDRAFT_83483, partial [Gu... [more]
gi|829168590|ref|XP_001015329.3|1.708e-6352.04Serine/Threonine kinase domain protein [Tetrahymen... [more]
gi|145526799|ref|XP_001449205.1|1.170e-6250.00hypothetical protein [Paramecium tetraurelia strai... [more]
gi|674230019|gb|KFK23804.1|2.153e-6151.34hypothetical protein AALP_AAs43167U000100, partial... [more]
gi|471222136|ref|XP_004029873.1|2.682e-6147.78protein kinase domain protein, partial [Ichthyopht... [more]
gi|678313215|emb|CDW87975.1|2.717e-6149.26protein kinase domain containing protein [Stylonyc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4961rna4961Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications