EWM25734.1, cds4944 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25734.1 vs. NCBI_GenBank
Match: gi|553179205|ref|XP_005852667.1| (hypothetical protein NGA_0697300 [Nannochloropsis gaditana CCMP526] >gi|422295867|gb|EKU23166.1| hypothetical protein NGA_0697300 [Nannochloropsis gaditana CCMP526] >gi|585107596|gb|EWM25734.1| resistance to phytophthora 1 protein [Nannochloropsis gaditana]) HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0 Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0
Query: 1 MSFLVNTLLALCFLFISTFAFVPSTPVSFGFIDRMTPHKARTTALSAVKERTAASGKQEQAQERVGISEDDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGRERGVRK 296
MSFLVNTLLALCFLFISTFAFVPSTPVSFGFIDRMTPHKARTTALSAVKERTAASGKQEQAQERVGISEDDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGRERGVRK
Sbjct: 1 MSFLVNTLLALCFLFISTFAFVPSTPVSFGFIDRMTPHKARTTALSAVKERTAASGKQEQAQERVGISEDDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGRERGVRK 296
BLAST of EWM25734.1 vs. NCBI_GenBank
Match: gi|299472083|emb|CBN79668.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 214.927 bits (546), Expect = 2.152e-64 Identity = 122/289 (42.21%), Postives = 175/289 (60.55%), Query Frame = 0
Query: 20 AFVPSTPVSFGFIDRMTPHKARTTALSAVK--ERTAA---SGKQEQAQERVGISE--------DDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGRERGVR 295
AFVP T F H + T++ ER+A +G+Q++ Q +++ D ++QR+ ++V E+GV+LDQL+NP+KV+NLE +L+ LR AA G +E +I KKE+ L EKR+ M+GWLK +F+GQ+++ +L G++A D +P F H+ + I+ FW W+FT+PSLRAR+PGA EK ALD+AFL TPVVS MPF+T++ I+WAN YGY F GK + GEG S+ P LK K+LD+GSG+ERGVR
Sbjct: 44 AFVPPTG-GFATARSSAVHVSSTSSRRGCSGVERSARPRRTGRQQEGQGDALMAQMTDEEMALDQALIQRVTQEVEAESGVELDQLINPAKVINLERDLVKLR---AALEDEPGTDREAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFITKEPVPIYWANIATLVACYGYGFTV-GKPDDGEGGASKSQ-----PKWLKFIFKSLDFGSGQERGVR 322
BLAST of EWM25734.1 vs. NCBI_GenBank
Match: gi|551535164|ref|XP_005756405.1| (hypothetical protein EMIHUDRAFT_460287 [Emiliania huxleyi CCMP1516] >gi|551581739|ref|XP_005776349.1| hypothetical protein EMIHUDRAFT_450611 [Emiliania huxleyi CCMP1516] >gi|485603249|gb|EOD03976.1| hypothetical protein EMIHUDRAFT_460287 [Emiliania huxleyi CCMP1516] >gi|485628453|gb|EOD23920.1| hypothetical protein EMIHUDRAFT_450611 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 196.823 bits (499), Expect = 1.167e-58 Identity = 112/216 (51.85%), Postives = 144/216 (66.67%), Query Frame = 0
Query: 80 DVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGRERGVR 295
+VR TGV L+ LLNPSKVVNLE E I E AA G +A +L+ +++K ET+LA EKR V RGWLKNLF+GQSLLA+ +SG++ YDA+PG + L L +RA FWS+W+F IPSLRARRP EK+AL++AFL +P+++LGMPFLT++ IW AN Y Y A DG E D + GP L+ LD+GSG+ERGVR
Sbjct: 4 EVRALTGVALEDLLNPSKVVNLERERILTEAELGAAADGAERA--ELQEKLDKIETRLAAEKRTVFRGWLKNLFIGQSLLAIAISGLMVYDAIPGVQ-LDLSLRALGFWSYWLFVIPSLRARRPRGWEKRALNLAFLGSPLLTLGMPFLTKEPSLIWCANLALLLGCYAYGLA---------AGDGDGEVD-SFSGP----LRWLDFGSGQERGVR 202
BLAST of EWM25734.1 vs. NCBI_GenBank
Match: gi|397624597|gb|EJK67440.1| (hypothetical protein THAOC_11524 [Thalassiosira oceanica]) HSP 1 Score: 174.866 bits (442), Expect = 1.262e-48 Identity = 107/256 (41.80%), Postives = 149/256 (58.20%), Query Frame = 0
Query: 67 ISEDDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKALAKLEA-----------------QIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDA---LPGF------EHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGRERGVRK 296
++ +DP V++I VR E GV LD+LLNP+KVVNLE +L NLR + A T + A+L +IEKKE L TE+R V RGWLK++FLGQ+ +++ LS V+A + GF ++ I+ FW +W+F +PSLR+RRP EKKALD+AFL TP++SL P T+D IW AN + +YG+ F + E+GG +D+ P L+ K+LD+GSGRERG RK
Sbjct: 122 MTSEDPFVKQIDASVRGEMGVGLDELLNPAKVVNLERDLYNLRMDLAQLTGVQVQQDAELTTVLADGGGGGEEADAVRQKIEKKERDLNTERRSVFRGWLKSVFLGQAAISMALSYVMATNPSALFGGFGWFNNVANMDTSIQVLGFWWWWLFIVPSLRSRRPSGKEKKALDIAFLGTPLISLLSPVATKDTGLIWMANFLVVAGAYGFTFLV-------DDEEGG--DDKKDPQWLRFVYKSLDFGSGRERGARK 368
BLAST of EWM25734.1 vs. NCBI_GenBank
Match: gi|1210528015|dbj|GAX13130.1| (hypothetical protein FisN_17Hh059 [Fistulifera solaris]) HSP 1 Score: 167.933 bits (424), Expect = 1.929e-46 Identity = 105/259 (40.54%), Postives = 140/259 (54.05%), Query Frame = 0
Query: 67 ISEDDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNE------RAAATQGGGKAL---------------AKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALP--------GFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGRERGVRK 296
++ DDP VQ I ++R+ GV LD LLNP+KVVNLE +L NLR E RA G K L L +I KKE L E+R V RGWLKN+FL Q++L+ LS V+A + G ++ + I+ +W +W+F IPSLR+RRP EKKALD+AFL +P +SL P T+D IW AN V +Y +A+ S++D P LK K+LD+GSGRERG R+
Sbjct: 72 LTSDDPFVQAIDAGIQRDVGVPLDALLNPAKVVNLERDLYNLRMELATLTGRADILVGDDKTLLTTAECDGGGGGEDAEALRQKITKKEKDLIIERRSVFRGWLKNIFLAQAILSFGLSYVMATNPASLFGGYGWYGVYNMDVSIQVLGYWWWWLFVIPSLRSRRPKGAEKKALDIAFLASPAISLLAPVATKDTGLIWAANFVVVASAYAFAYLVDSD---------DSDDDSNTPEWLKFVYKSLDFGSGRERGARQ 321
BLAST of EWM25734.1 vs. NCBI_GenBank
Match: gi|1210521002|dbj|GAX20107.1| (hypothetical protein FisN_17Lh059 [Fistulifera solaris]) HSP 1 Score: 167.162 bits (422), Expect = 4.473e-46 Identity = 105/260 (40.38%), Postives = 140/260 (53.85%), Query Frame = 0
Query: 67 ISEDDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAAT-------QGGGKALAK---------------LEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYD--------ALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGRERGVRK 296
++ DDP VQ I ++R+ GV LD LLNP+KVVNLE +L NLR E A T G K L L +I KKE L E+R V RGWLKN+FL Q++L+ LS V+A + G ++ + I+ +W +W+F IPSLR+RRP EKKALD+AFL +P +SL P T+D IW AN V +Y +A+ S++D P LK K+LD+GSGRERG R+
Sbjct: 73 LTSDDPFVQAIDAGIQRDVGVPLDALLNPAKVVNLERDLYNLRMELATLTGRADIIVVGDDKTLLTTTECDGGGGGDDAEALRQKIAKKEKDLIIERRSVFRGWLKNIFLAQAILSFGLSYVMATNPASLFGGYGWYGVYNMDVSIQVLGYWWWWLFVIPSLRSRRPKGAEKKALDIAFLASPAISLLAPVATKDTGLIWTANFVVVASAYAFAYLVDSD---------DSDDDSNTPEWLKFVYKSLDFGSGRERGARQ 323
BLAST of EWM25734.1 vs. NCBI_GenBank
Match: gi|873226594|emb|CEM20875.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 173.326 bits (438), Expect = 5.396e-46 Identity = 112/292 (38.36%), Postives = 160/292 (54.79%), Query Frame = 0
Query: 17 STFAFVPSTPVSFGFIDRM---TPHKARTTALSAVKERTAASGKQEQAQERVGISEDDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNE--------RAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGP--LKAALKALDWGSGRERGVR 295
S+ FV S+ S D + TP+++ S +Q QA + V D +V+R+ ++ +D+DQL+NP KV+ LE EL L E + A Q A+++L+ I KKE L TEK L +RGWLK +FLGQS LA +S ++ Y+ +PG + L ++ FW++W+F IPSLRAR+P EK+ALD AFL V +L P T++ TI+W NA G+S YA ++ + D EE E GP L A KALD+GSG+ERG+R
Sbjct: 52 SSLGFVGSSWASVRSADHLAHKTPYRSARPLFSGPSSPDVKQPQQPQASDTV----DPRIVERVNAELGARFNIDVDQLMNPLKVLGLEQELETLNAEMETLKAKPQTAEVQA---AISELDKTITKKEKILETEKTLYVRGWLKAVFLGQSALAAAISAMLVYNNVPGVGEVDLSLQVLGFWNWWLFIIPSLRARKPAKKEKRALDWAFLAVLVTTLAAPSFTKEPSTIYWINAAVLGIS--YAISYSAPFPLFDQGDAQQEEQE---GPEWLSWAFKALDFGSGQERGLR 331
BLAST of EWM25734.1 vs. NCBI_GenBank
Match: gi|546318247|ref|XP_005716655.1| (unnamed protein product [Chondrus crispus] >gi|507113200|emb|CDF36836.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 161.77 bits (408), Expect = 2.028e-44 Identity = 102/270 (37.78%), Postives = 150/270 (55.56%), Query Frame = 0
Query: 24 STPVSFGFIDRMTPHKARTTALSAVKERTAASGKQEQAQERVGISEDDPMVQRIREDVRRETGVDLDQLLNPSKVVNL--EFELINLRNERAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARR-PGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGR 290
S P I R + RT A E T GK + E DPM +R+R+++ + G++LD+LLN KVVNL + E++ +E+ A G L + ++ K E+ L EKR VM+ WLK LFL Q+++ + + GV+A D +PG + +PL RA FW+ W+FTIP+LRAR+ EK AL+VAFL TP++++ +P LT++ IW A+ G Y + +G G+ E+G E G +K LK LDWGS R
Sbjct: 38 SRPALARAIRRKNVSRCRTLPQMAASE-TETEGKSDTITE-------DPMTRRVRDELAAD-GINLDELLNAGKVVNLTRKLEMLTAESEKLTA---GSPELQDAKQKMSKLESDLVREKRQVMQNWLKQLFLLQAIVFIGIGGVLANDVVPGVDSVPLVGRALGFWTTWLFTIPALRARKGTSKTEKSALNVAFLATPLLNVALPALTKNCGIIWAADVALLGACYAFYGITAKRGADGD-EEGNRPVKEQ--GKVKGILKYLDWGSWR 292
BLAST of EWM25734.1 vs. NCBI_GenBank
Match: gi|544216258|ref|XP_005538274.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449018836|dbj|BAM82238.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 154.066 bits (388), Expect = 1.487e-41 Identity = 89/225 (39.56%), Postives = 129/225 (57.33%), Query Frame = 0
Query: 71 DPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKA-LAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDE----TLPGPLKAALKALDWGSGR 290
DP+ R+R+++ G++L+QLLNPSKVVNLE +L + A T G A +L ++ K + +L EKR VMR WLKNLF+ Q +L L G +A+D+ LPL ++A FW W+FTIPSLRAR+P + EK AL+V+FL+ PV++L +P +D +W A + Y Y + + + +ED+ L L A L+ LDWGS R
Sbjct: 64 DPVEARVRKELE-SAGIELEQLLNPSKVVNLERKLAEYQTRLAELTSSGNAAERDRLLSKFSKMQRELEQEKRAVMRQWLKNLFVAQGILTAALGGWMAFDS-----RLPLYVQALGFWMVWLFTIPSLRARKPSSAEKNALNVSFLIAPVMNLVLPVFLKDTGELWLAQILQLIGCYLYYGVWTPSSVKDARKTAVQQEDQGGTKRLNVRLPAILRWLDWGSWR 282
BLAST of EWM25734.1 vs. NCBI_GenBank
Match: gi|545701707|ref|XP_005703186.1| (hypothetical protein Gasu_56750 [Galdieria sulphuraria] >gi|452819611|gb|EME26666.1| hypothetical protein Gasu_56750 [Galdieria sulphuraria]) HSP 1 Score: 127.487 bits (319), Expect = 4.762e-32 Identity = 66/209 (31.58%), Postives = 114/209 (54.55%), Query Frame = 0
Query: 82 RRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGR 290
+ ++ ++LLNP+K+ +L+ + L + + +++ ++EK E + EKR VM L++LF+ Q+++++ + G++A + P + +PL RA FW W+FTIPSLRAR+P EK AL+VAFL PV ++ +PF+ +D +W+ N YGY F + R + + ++ L+ LDWGS R
Sbjct: 22 KEQSTASTEELLNPAKLASLQRQYKELLEQFEQTLDKHNRK--EMQLRLEKLERNIELEKRSVMTSGLRSLFVVQAIVSLSVGGLLAANKFPFVQEVPLVFRALGFWMVWLFTIPSLRARKPNMAEKNALNVAFLACPVANVVIPFVNKDTFLLWFVNVSVVLSLYGYYFFLSDEAVRAQSQ-----------LKIRGILRYLDWGSWR 217 The following BLAST results are available for this feature:
BLAST of EWM25734.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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