EWM25727.1, cds4931 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25727.1 vs. NCBI_GenBank
Match: gi|585107589|gb|EWM25727.1| (d-aminoacid aminotransferase-like plp-dependent enzyme-like protein [Nannochloropsis gaditana] >gi|585107590|gb|EWM25728.1| d-aminoacid aminotransferase-like plp-dependent enzyme-like protein [Nannochloropsis gaditana]) HSP 1 Score: 738.799 bits (1906), Expect = 0.000e+0 Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0
Query: 1 MGLQPGLERPTFRRPILPSYLYFLLFSMQPIIATSFSAGTLTSLTPQNPPPPASGVSVRKTPRQFLMERPPGPYTCLRARDESLLGFDFHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEEALTEASQQHPSEDGKEGSTGSTEKLRDFFVTVHIDESSIVLPSSTSGVALSAHAVSMPYAVMPPPVTLEIRGEGRRSPDVKHSQWLRDRQGLERFRVGPGGEVALSRSLPAGRGEEEGKAGKAGREVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGSGRVLVPIGRVEGTSVGLPPVDLAAAPGPITNLVRARLLYDMEDGWENLRSLASR 370
MGLQPGLERPTFRRPILPSYLYFLLFSMQPIIATSFSAGTLTSLTPQNPPPPASGVSVRKTPRQFLMERPPGPYTCLRARDESLLGFDFHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEEALTEASQQHPSEDGKEGSTGSTEKLRDFFVTVHIDESSIVLPSSTSGVALSAHAVSMPYAVMPPPVTLEIRGEGRRSPDVKHSQWLRDRQGLERFRVGPGGEVALSRSLPAGRGEEEGKAGKAGREVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGSGRVLVPIGRVEGTSVGLPPVDLAAAPGPITNLVRARLLYDMEDGWENLRSLASR
Sbjct: 1 MGLQPGLERPTFRRPILPSYLYFLLFSMQPIIATSFSAGTLTSLTPQNPPPPASGVSVRKTPRQFLMERPPGPYTCLRARDESLLGFDFHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEEALTEASQQHPSEDGKEGSTGSTEKLRDFFVTVHIDESSIVLPSSTSGVALSAHAVSMPYAVMPPPVTLEIRGEGRRSPDVKHSQWLRDRQGLERFRVGPGGEVALSRSLPAGRGEEEGKAGKAGREVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGSGRVLVPIGRVEGTSVGLPPVDLAAAPGPITNLVRARLLYDMEDGWENLRSLASR 370
BLAST of EWM25727.1 vs. NCBI_GenBank
Match: gi|570332796|gb|ETO80744.1| (hypothetical protein F444_04818 [Phytophthora parasitica P1976] >gi|570332797|gb|ETO80745.1| hypothetical protein, variant [Phytophthora parasitica P1976]) HSP 1 Score: 104.76 bits (260), Expect = 7.301e-22 Identity = 88/286 (30.77%), Postives = 131/286 (45.80%), Query Frame = 0
Query: 61 TPRQFLMERPPGPYTCLRA---------RDESLLGFDFHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEEALTEASQQHPSEDGKEGSTGSTEKLRDFFVTVHIDESSIVLPSSTSGVALSAHAVSMPYAVMPPPVTLE----IRGEGRRSPDVKHSQWLRDRQGLERFRVG-------PGGEVALSRSLPAGRGEEEGKAGKAGREVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGSGRVLVPIGRV 326
+ + FL RP G YTC RA + L+ + FH QRL GI + N + R ++ + L A+Q + + TE D ++V LP S + V++ +MP P L + GEGR + KH+QW+ DR +E+ V P EV LS++ P G R +LEGL++N FVVKGGKL TA +G+L G R + L+A L +PV K+ D W+ AF+T + RV++ + R+
Sbjct: 32 SAKLFLQSRPAGVYTCARAIASVEISSELSKVLVEWSFHLQRLSTGIATVDN-----NFNQGRSKL-----DKLKMATQLLATTVLTQWRAIETE---DGMLSVLW----YPLPDSDD------YGVAVHICLMPTPKCLASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSKAGPGG-----------DRLILEGLITNFFVVKGGKLYTADEGVLQGSTRELVLKACHDLSIPVVLEAPKLSERD--SWQAAFVTSAVRVVIDVARM 281
BLAST of EWM25727.1 vs. NCBI_GenBank
Match: gi|568024393|gb|ETL98429.1| (hypothetical protein L917_04493 [Phytophthora parasitica] >gi|570992103|gb|ETP49701.1| hypothetical protein F442_04844 [Phytophthora parasitica P10297] >gi|570992104|gb|ETP49702.1| hypothetical protein, variant [Phytophthora parasitica P10297] >gi|970616285|gb|KUF64469.1| hypothetical protein AM587_10017234 [Phytophthora nicotianae]) HSP 1 Score: 104.375 bits (259), Expect = 7.830e-22 Identity = 88/286 (30.77%), Postives = 131/286 (45.80%), Query Frame = 0
Query: 61 TPRQFLMERPPGPYTCLRA---------RDESLLGFDFHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEEALTEASQQHPSEDGKEGSTGSTEKLRDFFVTVHIDESSIVLPSSTSGVALSAHAVSMPYAVMPPPVTLE----IRGEGRRSPDVKHSQWLRDRQGLERFRVG-------PGGEVALSRSLPAGRGEEEGKAGKAGREVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGSGRVLVPIGRV 326
+ + FL RP G YTC RA + L+ + FH QRL GI + N + R ++ + L A+Q + + TE D ++V LP S + V++ +MP P L + GEGR + KH+QW+ DR +E+ V P EV LS++ P G R +LEGL++N FVVKGGKL TA +G+L G R + L+A L +PV K+ D W+ AF+T + RV++ + R+
Sbjct: 32 SAKLFLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDN-----NFNQGRSKL-----DKLKMATQLLATTVLTQWRAIETE---DGMLSVLW----YPLPDSDD------YGVAVHICLMPTPKCLASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSKAGPGG-----------DRLILEGLITNFFVVKGGKLYTADEGVLQGSTRELVLKACHDLSIPVVLEAPKLSERD--SWQAAFVTSAVRVVIDVARM 281
BLAST of EWM25727.1 vs. NCBI_GenBank
Match: gi|567966412|gb|ETK91860.1| (hypothetical protein L915_04653 [Phytophthora parasitica] >gi|567995115|gb|ETL45258.1| hypothetical protein L916_04608 [Phytophthora parasitica] >gi|570956806|gb|ETP21785.1| hypothetical protein F441_04766 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 104.375 bits (259), Expect = 8.654e-22 Identity = 88/286 (30.77%), Postives = 131/286 (45.80%), Query Frame = 0
Query: 61 TPRQFLMERPPGPYTCLRA---------RDESLLGFDFHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEEALTEASQQHPSEDGKEGSTGSTEKLRDFFVTVHIDESSIVLPSSTSGVALSAHAVSMPYAVMPPPVTLE----IRGEGRRSPDVKHSQWLRDRQGLERFRVG-------PGGEVALSRSLPAGRGEEEGKAGKAGREVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGSGRVLVPIGRV 326
+ + FL RP G YTC RA + L+ + FH QRL GI + N + R ++ + L A+Q + + TE D ++V LP S + V++ +MP P L + GEGR + KH+QW+ DR +E+ V P EV LS++ P G R +LEGL++N FVVKGGKL TA +G+L G R + L+A L +PV K+ D W+ AF+T + RV++ + R+
Sbjct: 32 SAKLFLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDN-----NFNQGRSKL-----DKLKMATQLLATTVLTQWRAIETE---DGMLSVLW----YPLPDSDD------YGVAVHICLMPTPKCLASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSKAGPGG-----------DRLILEGLITNFFVVKGGKLYTADEGVLQGSTRELVLKACHDLSIPVVLEAPKLSERD--SWQAAFVTSAVRVVIDVARM 281
BLAST of EWM25727.1 vs. NCBI_GenBank
Match: gi|566029089|gb|ETI52000.1| (hypothetical protein F443_04765 [Phytophthora parasitica P1569]) HSP 1 Score: 104.375 bits (259), Expect = 9.189e-22 Identity = 88/286 (30.77%), Postives = 131/286 (45.80%), Query Frame = 0
Query: 61 TPRQFLMERPPGPYTCLRA---------RDESLLGFDFHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEEALTEASQQHPSEDGKEGSTGSTEKLRDFFVTVHIDESSIVLPSSTSGVALSAHAVSMPYAVMPPPVTLE----IRGEGRRSPDVKHSQWLRDRQGLERFRVG-------PGGEVALSRSLPAGRGEEEGKAGKAGREVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGSGRVLVPIGRV 326
+ + FL RP G YTC RA + L+ + FH QRL GI + N + R ++ + L A+Q + + TE D ++V LP S + V++ +MP P L + GEGR + KH+QW+ DR +E+ V P EV LS++ P G R +LEGL++N FVVKGGKL TA +G+L G R + L+A L +PV K+ D W+ AF+T + RV++ + R+
Sbjct: 32 SAKLFLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDN-----NFNQGRSKL-----DKLKMATQLLATTVLTQWRAIETE---DGMLSVLW----YPLPDSDD------YGVAVHICLMPTPKCLASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSKAGPGG-----------DRLILEGLITNFFVVKGGKLYTADEGVLQGSARELVLKACHDLSIPVVLEAPKLSERD--SWQAAFVTSAVRVVIDVARM 281
BLAST of EWM25727.1 vs. NCBI_GenBank
Match: gi|568054816|gb|ETM51590.1| (hypothetical protein L914_04601 [Phytophthora parasitica]) HSP 1 Score: 103.219 bits (256), Expect = 2.398e-21 Identity = 89/285 (31.23%), Postives = 130/285 (45.61%), Query Frame = 0
Query: 61 TPRQFLMERPPGPYTCLRA---------RDESLLGFDFHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEEALTEASQQHPSEDGKEGSTGSTEKLRDFFVTVHIDESSIVLPSSTSGVALSAHAVSMPYAVMPPPVTLE----IRGEGRRSPDVKHSQWLRDRQGLERFRVGPGGEVALSRSLPAGRGE--EEGKAGKAG----REVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGSGRVLVPIGRV 326
+ + FL RP G YTC RA + L+ + FH QRL GI + N + R ++ + L A+Q + + TE D ++V LP S + V++ +MP P L + GEGR + KH+QW+ DR +E+ V L RGE E KAG R +LEGL++N FVVKGGKL TA +G+L G R + L+A L +PV K+ D W+ AF+T + RV++ + R+
Sbjct: 32 SAKLFLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDN-----NFNQGRSKL-----DKLKMATQLLATTVLTQWRAIETE---DGMLSVLW----YPLPDSDD------YGVAVHICLMPTPKCLASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVV----------QLVETRGEPIHEALLSKAGPGGDRLILEGLITNFFVVKGGKLYTADEGVLQGSARELVLKACHDLSIPVVLEAPKLSERD--SWQAAFVTSAVRVVIDVARM 281
BLAST of EWM25727.1 vs. NCBI_GenBank
Match: gi|953499812|emb|CEG38453.1| (Aminotransferase, class IV [Plasmopara halstedii]) HSP 1 Score: 98.2117 bits (243), Expect = 1.396e-19 Identity = 93/321 (28.97%), Postives = 137/321 (42.68%), Query Frame = 0
Query: 30 PIIATSFSAGTLTSLTPQN-PPPPASGVSVRKTPRQFLMERPPGPYTCLRAR------DE----SLLGFDFHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEEAL-TEASQQHPSEDGKEGSTGSTEKLR----DFFVTVHIDESSIVLPSSTSGVALSAHAVSMPYAVMPPPV----TLEIRGEGRRSPDVKHSQWLRDRQGLERFRVGPGGEVALSRSLPAGRGEEEGKAGKAG----REVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGSGRVLVPIGRV 326
P +A A +L S+ PA + + + FL RP G Y+C R + DE S++ + FH QRL GI S N L L ++ + L T + + D ++G R DF V +HI MP P T+ + GEGR + +KH+QW+ DR +E++ E+A R G +E K G R +LEGLVSN FVVK G + TA +G+L G R + L+A L +PV K L + W+ AF+T RV++ + +
Sbjct: 4 PCVAFVAEAQSLLSVDKVTLSAIPARNCTELPSAKLFLKSRPLGVYSCARVKGLAEKSDEQLPASVVRWSFHLQRLCDGITR---LTSDFNQDTLILDNLKLVTQLLATTVVTKWLAVDARDGMLSVLWYPRLDRNDFGVAIHI-------------------------CPMPTPTCIASTVLVYGEGRVNARLKHTQWIEDRVPIEKY----AAELAKMR----GESIQEVILSKCGPGGDRLLLEGLVSNFFVVKDGAVYTADEGVLQGSTRELVLKACADLKIPVILEAPK--LSERKLWQAAFVTSVVRVVIDVSWI 286
BLAST of EWM25727.1 vs. NCBI_GenBank
Match: gi|675186493|ref|XP_008902131.1| (hypothetical protein PPTG_09036 [Phytophthora parasitica INRA-310] >gi|568097374|gb|ETN12116.1| hypothetical protein PPTG_09036 [Phytophthora parasitica INRA-310]) HSP 1 Score: 97.4413 bits (241), Expect = 1.498e-19 Identity = 85/276 (30.80%), Postives = 124/276 (44.93%), Query Frame = 0
Query: 61 TPRQFLMERPPGPYTCLRA---------RDESLLGFDFHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEEALTEASQQHPSEDGKEGSTGSTEKLRDFFVTVHIDESSIVLPSSTSGVALSAHAVSMPYAVMPPPVTLE----IRGEGRRSPDVKHSQWLRDRQGLERFRVG-------PGGEVALSRSLPAGRGEEEGKAGKAGREVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGS 316
+ + FL RP G YTC RA + L+ + FH QRL GI + N + R ++ + L A+Q + + TE D ++V LP S + V++ +MP P L + GEGR + KH+QW+ DR +E+ V P EV LS++ P G R +LEGL++N FVVKGGKL TA +G+L G R + L+A L +PV K+ D W+ AF+T +
Sbjct: 32 SAKLFLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDN-----NFNQGRSKL-----DKLKMATQLLATTVLTQWRAIETE---DGMLSVLW----YPLPDSDD------YGVAVHICLMPTPKCLASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSKAGPGG-----------DRLILEGLITNFFVVKGGKLYTADEGVLQGSTRELVLKACHDLSIPVVLEAPKLSERD--SWQAAFVTST 271
BLAST of EWM25727.1 vs. NCBI_GenBank
Match: gi|1214688213|gb|OWZ04225.1| (Thioredoxinlike protein [Phytophthora megakarya]) HSP 1 Score: 97.4413 bits (241), Expect = 2.577e-19 Identity = 88/285 (30.88%), Postives = 124/285 (43.51%), Query Frame = 0
Query: 61 TPRQFLMERPPGPYTCLRARDESLLGFD---------FHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEE--ALTEASQQHPSEDGKEGSTGSTEKLRDFFVTVHIDESSIVLPSSTSGVALSAHAVSMPYAVMPPPVTLE----IRGEGRRSPDVKHSQWLRDRQGLERFRVG-------PGGEVALSRSLPAGRGEEEGKAGKAGREVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGSGRVLVPI 323
+ + FL RP G YTC RA+ L D FH QRL G+ + S N +L L + A+ +Q E TV S + PS S ++V++ M P L + GEGR + KHSQW+ DR LE+ + P EV LSR+ P G R +LEGL++N F+VK GKL TA +G+L G R + L+A L +PV K L ++ W+ AF+T + RV+V +
Sbjct: 32 SAKSFLQSRPAGVYTCARAKASVALDSDLSTLLVEWSFHLQRLSAGLTTM---DSNFNTDKLMVDKLKMATRRLAIMVLTQWRAIE------------------TVDGMLSVLWCPSPDS----DEYSVAVHVCPMLTPTCLASTVLVYGEGRTNARCKHSQWIEDRIPLEKHMIQVEETRGEPIHEVLLSRAGPGG-----------DRLLLEGLITNFFIVKEGKLYTADEGVLQGSTRELVLKACYDLLIPVVLEAPK--LSELDSWQAAFVTSAVRVVVDV 278
BLAST of EWM25727.1 vs. NCBI_GenBank
Match: gi|1173951508|gb|OQR99382.1| (hypothetical protein ACHHYP_06953 [Achlya hypogyna]) HSP 1 Score: 94.7449 bits (234), Expect = 1.004e-18 Identity = 82/276 (29.71%), Postives = 116/276 (42.03%), Query Frame = 0
Query: 61 TPRQFLME---RPPGPYTCLRARDESLLGFDFHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEEALTEASQQHPSEDGKEGSTGSTEKLRDFFVTVHIDESSIVLPSSTSGVALSAHAVSMPY------AVMPP--PVTLEIRGEGRRSPDVKHSQWLRDRQGLERFRVGPGGEVALSRSLPAGRGEEE-GKAGKAGREVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGSGRVLVPIG 324
TP++FLM G YTCLR R + + FH RL + P L + EA A + G DF VTV + H +MP A +P P+ + G GRR+P VKH W+ +R+ LE E+ L GE + +LEGL++N FV+KGGK+ TA D +LPG R + + A +LG+P+ E +LE+ WE AF T R++VP+
Sbjct: 2 TPKEFLMSLAYESGGEYTCLRLRRGRICMWPFHRSRL---------TVDPAAEDSLPATI-----EAAARARFGAAVDTG------------DFMVTV-----------VNANGEHHVHVCNMPALAFVSDAAVPTVRPIATLVLGSGRRNPTVKHVDWIYERKALEVTAAAKAAELGLD-----AFGEVLLSHTVQGTTRLLEGLITNFFVLKGGKVYTAGDAVLPGSTRALVMEACNSLGIPL--LLEAPVLEESASWEAAFTTSVVRLIVPVA 233 The following BLAST results are available for this feature:
BLAST of EWM25727.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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