EWM25742.1, cds4927 (CDS) Nannochloropsis gaditana

Overview
NameEWM25742.1
Unique Namecds4927
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:720580..720799 +
Alignment locationCM002464.1:720954..721447 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25742.1
Productuncharacterized protein
Orig transcript idgnl|cribi|Naga_100087g24.1122.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:720580..720799 +
CM002464.1supercontigCM002464.1:720954..721447 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0016301kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR010488Zeta_toxin_domain
IPR027417P-loop_NTPase
Homology
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|585107604|gb|EWM25742.1| (uncharacterized protein Naga_100087g24 [Nannochloropsis gaditana])

HSP 1 Score: 485.337 bits (1248), Expect = 2.198e-173
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
Query:    1 MVSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNNRRHEQRDVGKGGEAGGGGG 237
            MVSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNNRRHEQRDVGKGGEAGGGGG
Sbjct:    1 MVSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNNRRHEQRDVGKGGEAGGGGG 237          
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|546317033|ref|XP_005716323.1| (unnamed protein product [Chondrus crispus] >gi|507112843|emb|CDF36504.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 158.303 bits (399), Expect = 4.177e-41
Identity = 87/218 (39.91%), Postives = 122/218 (55.96%), Query Frame = 0
Query:    1 MVSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNN 218
            ++  + FW+ HG +VV VEAD FK  DP++ +L  +  PKA+  VH  S  AAEELFL A+  +RD++FD T++W  +  QT+ M+ DT + YKRGPGY +      SDG                          + E YW   ++    + A +YRVELVGV    E +V R I+RR+  GRGV V +QL SHALF+KNFE++    D + L+D  
Sbjct:  412 LIRNTPFWKEHGDDVVVVEADAFKMSDPLFHVLRSIT-PKAARIVHHDSVTAAEELFLQAVNSRRDVVFDGTMSWGEYAQQTVKMLTDTDYLYKRGPGYRK-----ESDGK-------------------------ITEVYWVRSAK--RMKPAPAYRVELVGVTADAETSVMRGIVRRITDGRGVAVPDQLHSHALFSKNFESYIEIMDAIYLFDTT 596          
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|545366633|ref|XP_005648203.1| (hypothetical protein COCSUDRAFT_66031 [Coccomyxa subellipsoidea C-169] >gi|384250179|gb|EIE23659.1| hypothetical protein COCSUDRAFT_66031 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 154.451 bits (389), Expect = 2.017e-39
Identity = 81/219 (36.99%), Postives = 118/219 (53.88%), Query Frame = 0
Query:    1 MVSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRL----NQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLY 215
            ++   +FW +  ++ V +EAD  K  D + + L+      N P  S  VH YST+AAE + ++A+  ++DI+FD T+ WAPF+ QT+AMVRD +H Y+RGPGY                               +  G  V E+YW+ +     E+    YR+ELVGV   P +AV R + R+L TGR VP+  QLRSH LF++N+E  A   D+  LY
Sbjct:  474 IIGHDDFWSKVCKDAVVIEADAIKNRDVMLKHLSSSDFTKNDPTLSSYVHEYSTKAAEAMLVAAVNKQKDIVFDGTMTWAPFVEQTIAMVRDHQHNYRRGPGYF-----------------------------TNEHGDTV-ERYWDRDDSTPSEECKRPYRIELVGVTCDPGLAVARGVWRKLRTGRSVPISSQLRSHRLFSENWEPLAHLADSATLY 662          
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|302788656|ref|XP_002976097.1| (hypothetical protein SELMODRAFT_104629 [Selaginella moellendorffii] >gi|300156373|gb|EFJ23002.1| hypothetical protein SELMODRAFT_104629 [Selaginella moellendorffii])

HSP 1 Score: 146.362 bits (368), Expect = 2.544e-37
Identity = 88/232 (37.93%), Postives = 122/232 (52.59%), Query Frame = 0
Query:    7 FWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQ------PKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKH-QYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATS------------YRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNNR 219
            FW    Q+ V VEAD FKE D VY+ ++  ++        ASE VH+ ST AA  L +SAL   RD+IFD T++W PF++QT+AM RD  + +Y+ GPGYV+                             S DGTVV E+YWE E +  + ++  +            YR+ELVGV   P +AV R I R ++T R VP++ QLRSH LFA + E +    D   +Y  N+
Sbjct:  230 FWSGVVQDTVVVEADAFKETDVVYRTISSSDRGDGGDIAMASELVHSSSTMAASSLLVSALNDGRDVIFDGTMSWEPFVAQTIAMARDVHNRRYRMGPGYVK-----------------------------SEDGTVV-EEYWERELDPEKRELGNASSEKFARKNRRPYRIELVGVTCEPVLAVERGIRRAIITKRAVPIKGQLRSHKLFAGSLEKYCELVDNAKIYTTNK 431          
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|302769722|ref|XP_002968280.1| (hypothetical protein SELMODRAFT_231175 [Selaginella moellendorffii] >gi|300163924|gb|EFJ30534.1| hypothetical protein SELMODRAFT_231175 [Selaginella moellendorffii])

HSP 1 Score: 144.05 bits (362), Expect = 4.981e-37
Identity = 90/226 (39.82%), Postives = 121/226 (53.54%), Query Frame = 0
Query:    7 FWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQ------PKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKH-QYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYW---EVESEVSEEQMATS---YRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNNR 219
            FW    Q+ V VEAD FKE D VY+ ++   +        ASE VH+ ST AA  L +SAL   RD+IFD T++W PF++QT+AM RD  + +Y+ GPGYV+                             S DGTVV E+YW   E+ +  SE+    S   YR+ELVGV   P +AV R I R ++T R VP++ QLRSH LFA + E +    D   +Y  N+
Sbjct:  135 FWSGVVQDTVVVEADAFKETDVVYRTISSSERGDGGDIAMASELVHSSSTMAASSLLVSALNDGRDVIFDGTMSWEPFVAQTIAMARDVHNRRYRMGPGYVK-----------------------------SEDGTVV-EEYWVPRELGNASSEKFARKSRRPYRIELVGVTCEPVLAVERGIRRAIITKRAVPIKGQLRSHKLFAGSLEKYCELVDNAKIYTTNK 330          
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|167535300|ref|XP_001749324.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163772190|gb|EDQ85845.1| predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 143.665 bits (361), Expect = 1.341e-35
Identity = 78/219 (35.62%), Postives = 117/219 (53.42%), Query Frame = 0
Query:    1 MVSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRG-VPVREQLRSHALFAKNFETFALQFDTVLLYDNN 218
            ++  S+FWR+H   VV +EAD  K +DP++Q L  +   +AS  VH  ST AAE+L + A+  +R I+FDST+ WAPF+ QTL M+ D  H Y +GPGYV                                DG+ + E+YW    E +     + YR  L+ + V P +A++RA++R +++GR     R  L SH  F++ F  +A +FD VLL D +
Sbjct:  553 LLYASDFWRQHAAQVVQIEADRLKTLDPLFQALKGVGAAEASAVVHQSSTSAAEDLLVKAVNARRHIVFDSTMMWAPFVHQTLDMIADQHHDYVKGPGYV-----------------------------TQADGSSI-EQYWVRGPETT---CKSKYRCVLLAMTVEPALAIKRAVVRWIVSGRAPSSTRRILSSHRWFSEAFPNYAARFDQVLLLDAD 738          
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|168000799|ref|XP_001753103.1| (predicted protein [Physcomitrella patens] >gi|162695802|gb|EDQ82144.1| predicted protein, partial [Physcomitrella patens])

HSP 1 Score: 133.65 bits (335), Expect = 3.442e-33
Identity = 84/226 (37.17%), Postives = 116/226 (51.33%), Query Frame = 0
Query:    2 VSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKAS---EAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKH-QYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATS--------YRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLY 215
            V  S FW    ++ V VEAD FKE D +Y+ L+ L++   S   E VH +ST+ A  L +SAL   RD+IFD T++W PF+ +T+ MVRD  + +Y+ GPGY                             + + DGT V E YWE  +E SE  +           YR+E VGV     +AV R + R + T RGVPV+ QLRSH LFAK+ E +    D   ++
Sbjct:  120 VLSSSFWAGVIKDAVVVEADAFKETDIIYRTLSSLSKGDVSGNAELVHQFSTETANSLLVSALNEGRDVIFDGTMSWEPFVIETIEMVRDIHNRRYRMGPGY-----------------------------KKNDDGTEV-ENYWEPLAEDSECAIVNKSNDGGKRPYRIEFVGVACDAHLAVVRGMRRAIATKRGVPVKGQLRSHKLFAKSLEKYISLVDAAKIF 315          
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|514686769|ref|XP_004990962.1| (hypothetical protein PTSG_12588 [Salpingoeca rosetta] >gi|326431553|gb|EGD77123.1| hypothetical protein PTSG_12588 [Salpingoeca rosetta])

HSP 1 Score: 136.732 bits (343), Expect = 4.307e-33
Identity = 77/214 (35.98%), Postives = 112/214 (52.34%), Query Frame = 0
Query:    5 SEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRG-VPVREQLRSHALFAKNFETFALQFDTVLLYDN 217
            S  W + G   + +EAD  K+ DP+++ L  + Q +ASE VH  ST+ AE +   A+  +R I+FDST+ W PF+ QT+AM+RD +H+Y+RG                                     G  V E YWE   +V +      YR+ ++ V   P VAVRRAI+R ++TGR   P R+ L SH +F+ NF  +A  FD +LL+DN
Sbjct: 1004 SPLWSQCGPRFLHIEADALKDKDPLFKALKGVGQSRASEVVHHQSTRTAEGMLAVAVAQRRHIVFDSTMMWRPFVEQTVAMLRDCEHEYRRG------------------------------PGYVVGSGGGVTETYWE---QVKDATTKRPYRLTMLAVTAPPHVAVRRAILRWIVTGRAPSPTRQVLASHKMFSANFRAYARMFDEILLFDN 1184          
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|1026061840|ref|XP_016575359.1| (PREDICTED: uncharacterized protein LOC107873135 [Capsicum annuum])

HSP 1 Score: 132.109 bits (331), Expect = 3.701e-32
Identity = 83/224 (37.05%), Postives = 111/224 (49.55%), Query Frame = 0
Query:    2 VSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLT----RLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDT-KHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEV--ESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNN 218
            + +  FW     N V VEAD FKE D +Y+ L+      +  + +E VH  ST AA  L ++AL   RD+I D TL+W PF+ QT+AM R+  +H+Y+ G GY                             + + DGTV  E YWE   + E S  +M+  YR+ELVGV   P +AV R I R + TGR V V+ QL SH  FA  F  +    D   LY  N
Sbjct:  236 ILKQSFWSEAAGNAVVVEADAFKETDVIYRALSSRGHHNDMLQTAELVHQNSTDAASSLLVTALNEGRDVIMDGTLSWEPFVEQTIAMARNVHQHRYRMGEGY-----------------------------KVAEDGTV-TENYWEQIEQGEESANKMSKPYRIELVGVVCDPYLAVVRGIRRAIATGRAVRVKSQLTSHKRFANAFPKYCNLVDNARLYCTN 429          
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|1109213135|ref|XP_019181018.1| (PREDICTED: uncharacterized protein LOC109176054 [Ipomoea nil] >gi|1109213137|ref|XP_019181019.1| PREDICTED: uncharacterized protein LOC109176054 [Ipomoea nil])

HSP 1 Score: 131.724 bits (330), Expect = 5.120e-32
Identity = 85/224 (37.95%), Postives = 115/224 (51.34%), Query Frame = 0
Query:    2 VSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLT----RLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDT-KHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMAT--SYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNN 218
            + +  FW    +N V VEAD FKE D +Y+ L+      +  + +E VH  ST AA  L ++AL   RD+I D TL+W PF+ QT+AM RD  +H+Y+ G GY                             + + DGTV+ E+YWE + E  EE   T  +YRVELVGV     +AV R I R + TGR V V+ QL+SH  FA  F ++    D   LY  N
Sbjct:  232 ILKDSFWSGAAKNAVVVEADAFKETDVIYRALSSRGHHQDMLQIAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWKPFVEQTIAMARDVHQHRYRMGEGY-----------------------------KIAEDGTVI-ERYWE-QMEEQEEAPKTKRAYRVELVGVVCDAYLAVVRGIRRAIATGRAVRVKSQLKSHKRFATAFRSYCELVDNAKLYSTN 424          
The following BLAST results are available for this feature:
BLAST of EWM25742.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107604|gb|EWM25742.1|2.198e-173100.00uncharacterized protein Naga_100087g24 [Nannochlor... [more]
gi|546317033|ref|XP_005716323.1|4.177e-4139.91unnamed protein product [Chondrus crispus] >gi|507... [more]
gi|545366633|ref|XP_005648203.1|2.017e-3936.99hypothetical protein COCSUDRAFT_66031 [Coccomyxa s... [more]
gi|302788656|ref|XP_002976097.1|2.544e-3737.93hypothetical protein SELMODRAFT_104629 [Selaginell... [more]
gi|302769722|ref|XP_002968280.1|4.981e-3739.82hypothetical protein SELMODRAFT_231175 [Selaginell... [more]
gi|167535300|ref|XP_001749324.1|1.341e-3535.62hypothetical protein [Monosiga brevicollis MX1] >g... [more]
gi|168000799|ref|XP_001753103.1|3.442e-3337.17predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|514686769|ref|XP_004990962.1|4.307e-3335.98hypothetical protein PTSG_12588 [Salpingoeca roset... [more]
gi|1026061840|ref|XP_016575359.1|3.701e-3237.05PREDICTED: uncharacterized protein LOC107873135 [C... [more]
gi|1109213135|ref|XP_019181018.1|5.120e-3237.95PREDICTED: uncharacterized protein LOC109176054 [I... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4939rna4939Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications