EWM25742.1, cds4927 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|585107604|gb|EWM25742.1| (uncharacterized protein Naga_100087g24 [Nannochloropsis gaditana]) HSP 1 Score: 485.337 bits (1248), Expect = 2.198e-173 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
Query: 1 MVSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNNRRHEQRDVGKGGEAGGGGG 237
MVSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNNRRHEQRDVGKGGEAGGGGG
Sbjct: 1 MVSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNNRRHEQRDVGKGGEAGGGGG 237
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|546317033|ref|XP_005716323.1| (unnamed protein product [Chondrus crispus] >gi|507112843|emb|CDF36504.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 158.303 bits (399), Expect = 4.177e-41 Identity = 87/218 (39.91%), Postives = 122/218 (55.96%), Query Frame = 0
Query: 1 MVSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNN 218
++ + FW+ HG +VV VEAD FK DP++ +L + PKA+ VH S AAEELFL A+ +RD++FD T++W + QT+ M+ DT + YKRGPGY + SDG + E YW ++ + A +YRVELVGV E +V R I+RR+ GRGV V +QL SHALF+KNFE++ D + L+D
Sbjct: 412 LIRNTPFWKEHGDDVVVVEADAFKMSDPLFHVLRSIT-PKAARIVHHDSVTAAEELFLQAVNSRRDVVFDGTMSWGEYAQQTVKMLTDTDYLYKRGPGYRK-----ESDGK-------------------------ITEVYWVRSAK--RMKPAPAYRVELVGVTADAETSVMRGIVRRITDGRGVAVPDQLHSHALFSKNFESYIEIMDAIYLFDTT 596
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|545366633|ref|XP_005648203.1| (hypothetical protein COCSUDRAFT_66031 [Coccomyxa subellipsoidea C-169] >gi|384250179|gb|EIE23659.1| hypothetical protein COCSUDRAFT_66031 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 154.451 bits (389), Expect = 2.017e-39 Identity = 81/219 (36.99%), Postives = 118/219 (53.88%), Query Frame = 0
Query: 1 MVSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRL----NQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLY 215
++ +FW + ++ V +EAD K D + + L+ N P S VH YST+AAE + ++A+ ++DI+FD T+ WAPF+ QT+AMVRD +H Y+RGPGY + G V E+YW+ + E+ YR+ELVGV P +AV R + R+L TGR VP+ QLRSH LF++N+E A D+ LY
Sbjct: 474 IIGHDDFWSKVCKDAVVIEADAIKNRDVMLKHLSSSDFTKNDPTLSSYVHEYSTKAAEAMLVAAVNKQKDIVFDGTMTWAPFVEQTIAMVRDHQHNYRRGPGYF-----------------------------TNEHGDTV-ERYWDRDDSTPSEECKRPYRIELVGVTCDPGLAVARGVWRKLRTGRSVPISSQLRSHRLFSENWEPLAHLADSATLY 662
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|302788656|ref|XP_002976097.1| (hypothetical protein SELMODRAFT_104629 [Selaginella moellendorffii] >gi|300156373|gb|EFJ23002.1| hypothetical protein SELMODRAFT_104629 [Selaginella moellendorffii]) HSP 1 Score: 146.362 bits (368), Expect = 2.544e-37 Identity = 88/232 (37.93%), Postives = 122/232 (52.59%), Query Frame = 0
Query: 7 FWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQ------PKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKH-QYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATS------------YRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNNR 219
FW Q+ V VEAD FKE D VY+ ++ ++ ASE VH+ ST AA L +SAL RD+IFD T++W PF++QT+AM RD + +Y+ GPGYV+ S DGTVV E+YWE E + + ++ + YR+ELVGV P +AV R I R ++T R VP++ QLRSH LFA + E + D +Y N+
Sbjct: 230 FWSGVVQDTVVVEADAFKETDVVYRTISSSDRGDGGDIAMASELVHSSSTMAASSLLVSALNDGRDVIFDGTMSWEPFVAQTIAMARDVHNRRYRMGPGYVK-----------------------------SEDGTVV-EEYWERELDPEKRELGNASSEKFARKNRRPYRIELVGVTCEPVLAVERGIRRAIITKRAVPIKGQLRSHKLFAGSLEKYCELVDNAKIYTTNK 431
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|302769722|ref|XP_002968280.1| (hypothetical protein SELMODRAFT_231175 [Selaginella moellendorffii] >gi|300163924|gb|EFJ30534.1| hypothetical protein SELMODRAFT_231175 [Selaginella moellendorffii]) HSP 1 Score: 144.05 bits (362), Expect = 4.981e-37 Identity = 90/226 (39.82%), Postives = 121/226 (53.54%), Query Frame = 0
Query: 7 FWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQ------PKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKH-QYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYW---EVESEVSEEQMATS---YRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNNR 219
FW Q+ V VEAD FKE D VY+ ++ + ASE VH+ ST AA L +SAL RD+IFD T++W PF++QT+AM RD + +Y+ GPGYV+ S DGTVV E+YW E+ + SE+ S YR+ELVGV P +AV R I R ++T R VP++ QLRSH LFA + E + D +Y N+
Sbjct: 135 FWSGVVQDTVVVEADAFKETDVVYRTISSSERGDGGDIAMASELVHSSSTMAASSLLVSALNDGRDVIFDGTMSWEPFVAQTIAMARDVHNRRYRMGPGYVK-----------------------------SEDGTVV-EEYWVPRELGNASSEKFARKSRRPYRIELVGVTCEPVLAVERGIRRAIITKRAVPIKGQLRSHKLFAGSLEKYCELVDNAKIYTTNK 330
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|167535300|ref|XP_001749324.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163772190|gb|EDQ85845.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 143.665 bits (361), Expect = 1.341e-35 Identity = 78/219 (35.62%), Postives = 117/219 (53.42%), Query Frame = 0
Query: 1 MVSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRG-VPVREQLRSHALFAKNFETFALQFDTVLLYDNN 218
++ S+FWR+H VV +EAD K +DP++Q L + +AS VH ST AAE+L + A+ +R I+FDST+ WAPF+ QTL M+ D H Y +GPGYV DG+ + E+YW E + + YR L+ + V P +A++RA++R +++GR R L SH F++ F +A +FD VLL D +
Sbjct: 553 LLYASDFWRQHAAQVVQIEADRLKTLDPLFQALKGVGAAEASAVVHQSSTSAAEDLLVKAVNARRHIVFDSTMMWAPFVHQTLDMIADQHHDYVKGPGYV-----------------------------TQADGSSI-EQYWVRGPETT---CKSKYRCVLLAMTVEPALAIKRAVVRWIVSGRAPSSTRRILSSHRWFSEAFPNYAARFDQVLLLDAD 738
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|168000799|ref|XP_001753103.1| (predicted protein [Physcomitrella patens] >gi|162695802|gb|EDQ82144.1| predicted protein, partial [Physcomitrella patens]) HSP 1 Score: 133.65 bits (335), Expect = 3.442e-33 Identity = 84/226 (37.17%), Postives = 116/226 (51.33%), Query Frame = 0
Query: 2 VSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKAS---EAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKH-QYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATS--------YRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLY 215
V S FW ++ V VEAD FKE D +Y+ L+ L++ S E VH +ST+ A L +SAL RD+IFD T++W PF+ +T+ MVRD + +Y+ GPGY + + DGT V E YWE +E SE + YR+E VGV +AV R + R + T RGVPV+ QLRSH LFAK+ E + D ++
Sbjct: 120 VLSSSFWAGVIKDAVVVEADAFKETDIIYRTLSSLSKGDVSGNAELVHQFSTETANSLLVSALNEGRDVIFDGTMSWEPFVIETIEMVRDIHNRRYRMGPGY-----------------------------KKNDDGTEV-ENYWEPLAEDSECAIVNKSNDGGKRPYRIEFVGVACDAHLAVVRGMRRAIATKRGVPVKGQLRSHKLFAKSLEKYISLVDAAKIF 315
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|514686769|ref|XP_004990962.1| (hypothetical protein PTSG_12588 [Salpingoeca rosetta] >gi|326431553|gb|EGD77123.1| hypothetical protein PTSG_12588 [Salpingoeca rosetta]) HSP 1 Score: 136.732 bits (343), Expect = 4.307e-33 Identity = 77/214 (35.98%), Postives = 112/214 (52.34%), Query Frame = 0
Query: 5 SEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRG-VPVREQLRSHALFAKNFETFALQFDTVLLYDN 217
S W + G + +EAD K+ DP+++ L + Q +ASE VH ST+ AE + A+ +R I+FDST+ W PF+ QT+AM+RD +H+Y+RG G V E YWE +V + YR+ ++ V P VAVRRAI+R ++TGR P R+ L SH +F+ NF +A FD +LL+DN
Sbjct: 1004 SPLWSQCGPRFLHIEADALKDKDPLFKALKGVGQSRASEVVHHQSTRTAEGMLAVAVAQRRHIVFDSTMMWRPFVEQTVAMLRDCEHEYRRG------------------------------PGYVVGSGGGVTETYWE---QVKDATTKRPYRLTMLAVTAPPHVAVRRAILRWIVTGRAPSPTRQVLASHKMFSANFRAYARMFDEILLFDN 1184
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|1026061840|ref|XP_016575359.1| (PREDICTED: uncharacterized protein LOC107873135 [Capsicum annuum]) HSP 1 Score: 132.109 bits (331), Expect = 3.701e-32 Identity = 83/224 (37.05%), Postives = 111/224 (49.55%), Query Frame = 0
Query: 2 VSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLT----RLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDT-KHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEV--ESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNN 218
+ + FW N V VEAD FKE D +Y+ L+ + + +E VH ST AA L ++AL RD+I D TL+W PF+ QT+AM R+ +H+Y+ G GY + + DGTV E YWE + E S +M+ YR+ELVGV P +AV R I R + TGR V V+ QL SH FA F + D LY N
Sbjct: 236 ILKQSFWSEAAGNAVVVEADAFKETDVIYRALSSRGHHNDMLQTAELVHQNSTDAASSLLVTALNEGRDVIMDGTLSWEPFVEQTIAMARNVHQHRYRMGEGY-----------------------------KVAEDGTV-TENYWEQIEQGEESANKMSKPYRIELVGVVCDPYLAVVRGIRRAIATGRAVRVKSQLTSHKRFANAFPKYCNLVDNARLYCTN 429
BLAST of EWM25742.1 vs. NCBI_GenBank
Match: gi|1109213135|ref|XP_019181018.1| (PREDICTED: uncharacterized protein LOC109176054 [Ipomoea nil] >gi|1109213137|ref|XP_019181019.1| PREDICTED: uncharacterized protein LOC109176054 [Ipomoea nil]) HSP 1 Score: 131.724 bits (330), Expect = 5.120e-32 Identity = 85/224 (37.95%), Postives = 115/224 (51.34%), Query Frame = 0
Query: 2 VSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLT----RLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDT-KHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMAT--SYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNN 218
+ + FW +N V VEAD FKE D +Y+ L+ + + +E VH ST AA L ++AL RD+I D TL+W PF+ QT+AM RD +H+Y+ G GY + + DGTV+ E+YWE + E EE T +YRVELVGV +AV R I R + TGR V V+ QL+SH FA F ++ D LY N
Sbjct: 232 ILKDSFWSGAAKNAVVVEADAFKETDVIYRALSSRGHHQDMLQIAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWKPFVEQTIAMARDVHQHRYRMGEGY-----------------------------KIAEDGTVI-ERYWE-QMEEQEEAPKTKRAYRVELVGVVCDAYLAVVRGIRRAIATGRAVRVKSQLKSHKRFATAFRSYCELVDNAKLYSTN 424 The following BLAST results are available for this feature:
BLAST of EWM25742.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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