EWM25752.1, cds4920 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25752.1 vs. NCBI_GenBank
Match: gi|585107615|gb|EWM25752.1| (Protein of unknown function DUF106, transmembrane [Nannochloropsis gaditana]) HSP 1 Score: 631.328 bits (1627), Expect = 0.000e+0 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
Query: 1 MQPPTLGHSSRDLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVGKDEQEGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYPTSLSATETFLTMETPTLRSSSLGVTGPTHTGVRHRSQTSNAKGK 306
MQPPTLGHSSRDLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVGKDEQEGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYPTSLSATETFLTMETPTLRSSSLGVTGPTHTGVRHRSQTSNAKGK
Sbjct: 1 MQPPTLGHSSRDLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVGKDEQEGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYPTSLSATETFLTMETPTLRSSSLGVTGPTHTGVRHRSQTSNAKGK 306
BLAST of EWM25752.1 vs. NCBI_GenBank
Match: gi|298713269|emb|CBJ26965.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 227.639 bits (579), Expect = 6.952e-70 Identity = 123/252 (48.81%), Postives = 163/252 (64.68%), Query Frame = 0
Query: 13 LLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVGKDEQEGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYPTS 264
L+LDPAIR+W V P+++ V+ + +LR +T L K +KP + ++L +Q L RA RLR NG I + F RK +F K + G L +E +PG NPM+NP MM +K Q F T M MM F+ FF GFVLV++PF LT FK MLQRG++LSTLDASYVS+TSW FLV FG+K + LF + P++ EA+V Q LG G A MGFD K+Y++ LD+ H + L DVEKRLLG +YPT+
Sbjct: 6 LVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKADKPLDKEELSYKQTLTRAKRLRGNGRFICREAFSRRKGYFTAK--EGGLLRQEDLPGQANPMANPDKMMGPMKSQMGFVGTNMFMMAFTSYFFEGFVLVRVPFPLTNRFKVMLQRGVQLSTLDASYVSSTSWYFLVMFGLKSVINLF-LRETPVQHEAKVIQSQ-----LGVG-AASMGFDTKKVYASEADSLDLAPHEWLLNDVEKRLLGSKYPTT 248
BLAST of EWM25752.1 vs. NCBI_GenBank
Match: gi|1173946484|gb|OQR95011.1| (hypothetical protein ACHHYP_00648 [Achlya hypogyna]) HSP 1 Score: 201.06 bits (510), Expect = 1.122e-59 Identity = 105/268 (39.18%), Postives = 158/268 (58.96%), Query Frame = 0
Query: 12 DLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVGKDEQ---EGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYPTSLSATETFLTMET 276
DL+LDP+IR+W ++P+++ +C ++R Y++ L K ++ E++++R+ Q + RA LR N I ++ F RK +F ++ +G L E+ A+N M NP MM+M+KG F ++ MM FF GFVLVK+PF+LT FK MLQRGIE++TLD SYVS+ S FL+ FG+ L G M ++AR +Q G +G GP M FD ++Y + L + H +ALE EK+LLGD P + A F++ T
Sbjct: 3 DLILDPSIRDWVIVPMIILFVCSAMVRNYVSVLLKTDEAGELEEVRKMQTVKRAATLRMNCQYIQRSAFSMRKFYFTASEKTDGVQGVLREKVKNDAMNQMMNPNSMMKMMKGNMTFMVSNFVMMGLMGYFFGGFVLVKVPFSLTQRFKAMLQRGIEMNTLDVSYVSSVSLYFLIMFGMSGFMSLI-LGSGNMNDDARAMQMQMG---MGAGP--GMAFDAPRVYKQERVNLRLHVHEYALEHAEKKLLGDEIPKKIEAPAAFVSAAT 264
BLAST of EWM25752.1 vs. NCBI_GenBank
Match: gi|813156346|ref|XP_012201522.1| (hypothetical protein SPRG_07345 [Saprolegnia parasitica CBS 223.65] >gi|641533744|gb|KDO27717.1| hypothetical protein SPRG_07345 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 197.593 bits (501), Expect = 2.045e-58 Identity = 104/259 (40.15%), Postives = 156/259 (60.23%), Query Frame = 0
Query: 12 DLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVGKDEQ---EGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYPTSLSA 267
DL+LDP+IR+W ++P+++ +C ++R Y++ L K ++ E+++LR+ + RA LR N + I ++ F RK +F ++ +GAL E+ A+N M NP MM+M+KG F ++ MM FF GFVLVK+PF+LT FK MLQRGIE++TLD SYVS+ S FL+ FG+ L G M ++AR +Q G+ +G GP GFD ++Y + L + H +ALE EK+LLGD P + A
Sbjct: 3 DLILDPSIRDWVIVPMIILFVCSAMIRNYVSVLLKTDEAGELEELRKINTVKRAAMLRMNCHYITRSAFSMRKFYFTASEKNDGVQGALREKVKNDAMNQMMNPNSMMKMMKGNMTFMVSNFVMMGLMGYFFGGFVLVKVPFSLTQRFKAMLQRGIEMTTLDVSYVSSVSLYFLIMFGMSGFMSLI-LGSGSMNDDARAMQMQM-GMGVGAGP----GFDAPRVYKQERVNLRLHVHEYALEHAEKKLLGDDIPKKVEA 255
BLAST of EWM25752.1 vs. NCBI_GenBank
Match: gi|325183086|emb|CCA17543.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 192.971 bits (489), Expect = 1.765e-56 Identity = 109/285 (38.25%), Postives = 156/285 (54.74%), Query Frame = 0
Query: 12 DLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVGKDEQ---EGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYPTSLSATETFLTME-TPTLRSSSL-GVTGPTH 291
+++LDP+IR+W V P+L+ +C +LR Y+T L K + D+LR + RA R N IH + RK +F+ +++ +G L E+ ++N M NP M+EM+KG F ++ MM FF GFVL K+PF+LT FK MLQRGIEL+TLD SYVS+ SW FLV FG++ L + E++ +A + +G G A MGFD K Y + L + H +ALE E+ LLG+ P + + T + TPT R S VT H
Sbjct: 3 EIILDPSIRDWVVFPMLIIFVCSAMLRHYVTLLLKSDTIANADELRPINTIKRAQITRMNSKFIHPDAYAMRKHYFIASEKKHGMKGVLREKVKNESMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVMFGIRGFLSLI------LGEQSASDDTKAMQMQMGMGAGANMGFDAPKAYKQERVNLRLQVHEWALEHAERILLGETIPITATETNAMTHQDATPTTRKSKYQKVTKRKH 281
BLAST of EWM25752.1 vs. NCBI_GenBank
Match: gi|1173955414|gb|OQS02382.1| (hypothetical protein THRCLA_05238 [Thraustotheca clavata]) HSP 1 Score: 189.504 bits (480), Expect = 3.345e-55 Identity = 97/259 (37.45%), Postives = 151/259 (58.30%), Query Frame = 0
Query: 12 DLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVGKDEQ---EGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYPTSLSA 267
D++LD +IR+W ++P+++ +C ++R Y++ L K +++++R+ Q + RA LR N + ++ F RK +F ++ +G L E+ A+N M NP MM+M+KG F ++ MM FF GFVLVK+PF+LT FK MLQRGIE++TLD SYVS+ S FL+ FG+ L G M ++A+ +Q G +G GP M FD ++Y + L + H +ALE EK+LLGD P + +
Sbjct: 3 DIILDISIRDWVIVPMIILFVCSAMIRNYVSVLLKSEDAGDLEEMRKMQTVKRATMLRMNCQYVQRSAFSMRKFYFTASEKNDGVQGVLREKVKNDAMNQMMNPNSMMKMMKGNMTFMVSNFVMMGLMGYFFGGFVLVKVPFSLTQRFKAMLQRGIEMTTLDVSYVSSVSLYFLIMFGMSGFMSLI-LGSGNMNDDAKAMQMQMG---MGAGP--GMAFDAPRIYKQERVNLRLHVHEYALEYAEKKLLGDEIPKKIES 255
BLAST of EWM25752.1 vs. NCBI_GenBank
Match: gi|669145280|ref|XP_008608202.1| (hypothetical protein SDRG_04311 [Saprolegnia diclina VS20] >gi|530740368|gb|EQC38610.1| hypothetical protein SDRG_04311 [Saprolegnia diclina VS20]) HSP 1 Score: 187.578 bits (475), Expect = 1.895e-54 Identity = 104/259 (40.15%), Postives = 152/259 (58.69%), Query Frame = 0
Query: 12 DLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVGKDEQ---EGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYPTSLSA 267
DL+LDP+IR+W ++P++V +C ++R Y++ L K ++ E+++LR+ + RA LR N I ++ F RK +F ++ +GAL E+ A+N M NP MM+M+KG F ++ MM FF GFVLVK+PF+LT FK MLQRGIE++TLD SYVS+ S FL+ FG+ L G M ++AR +Q G G A GFD ++Y + L + H +ALE EK+LLGD P + A
Sbjct: 3 DLILDPSIRDWVIVPMIVLFVCSAMMRNYVSVLLKTDEAGELEELRKINTVKRAAMLRMNCQYITRSAFSMRKFYFTASEKNDGVQGALREKVKNDAMNQMMNPNSMMKMMKGNMTFMVSNFVMMGLMGYFFGGFVLVKVPFSLTQRFKAMLQRGIEMTTLDVSYVSSVSLYFLIMFGMSGFMSLI-LGSGSMNDDARAMQMQM-----GMGAGAGPGFDAPRVYKQERVNLRLHAHEYALEHAEKKLLGDDIPKKVEA 255
BLAST of EWM25752.1 vs. NCBI_GenBank
Match: gi|635366934|emb|CCI44822.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 185.267 bits (469), Expect = 1.782e-53 Identity = 102/262 (38.93%), Postives = 148/262 (56.49%), Query Frame = 0
Query: 12 DLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVGKDEQ---EGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYPTSLSATET 270
+++LDP+IR+W V P+L+ +C +LR Y+T L K + D+LR + RA R N I + RK +F+ ++ +G L E+ ++N M NP M+EM+KG F ++ MM FF GFV+ K+PF+LT FK MLQRGIEL+TLD SYVS+ SW FLV FG++ L + E++ +A + +G G A MGFD K Y + L + H +ALE EK+LLG+ P ++A ET
Sbjct: 3 EIILDPSIRDWVVFPMLIIFVCSAMLRHYVTLLLKSDTIANADELRPINTIKRAQITRMNSKFIDPDAYAMRKHYFIASQKKHGIKGVLREKVKNESMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVIAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVMFGIRGFLSLI------LGEQSASDDTKAMQMQMGMGAGANMGFDAPKAYKQERVNLRLQVHEWALEHAEKKLLGEAIP--VTALET 256
BLAST of EWM25752.1 vs. NCBI_GenBank
Match: gi|570986493|gb|ETP45494.1| (hypothetical protein F442_08105 [Phytophthora parasitica P10297]) HSP 1 Score: 184.496 bits (467), Expect = 4.495e-53 Identity = 102/254 (40.16%), Postives = 144/254 (56.69%), Query Frame = 0
Query: 12 DLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVG---KDEQEGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYP 262
+++LDP+IR+W VLP+++ C ++R Y+T L K K ++ L + RA R N I F R+ +F KD +GAL E+ A+N M NP M+EM+KG F ++ MM FF GFVL K+PF+LT FK MLQRGIEL+TLD SYVS+ SW FLV+FG++ L D+ ++ + +Q G +G GP M FD K+Y + L + H +ALE EK+LLG+ P
Sbjct: 3 EIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKNEKMASVEQLTPMNTVKRAQITRVNSKFISPDAFAMRRHYFTASQKKDGLKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI-LDEKSASDDTKAMQMQMG---MGAGP--NMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGEPIP 250
BLAST of EWM25752.1 vs. NCBI_GenBank
Match: gi|1214703685|gb|OWZ15659.1| (hypothetical protein PHMEG_00010662 [Phytophthora megakarya]) HSP 1 Score: 184.111 bits (466), Expect = 9.712e-53 Identity = 102/259 (39.38%), Postives = 144/259 (55.60%), Query Frame = 0
Query: 12 DLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVG---KDEQEGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYPTSLSA 267
+++LDP+IR+W VLP+++ C ++R Y+T L K K ++ L+ + RA R N I F RK +F KD +GAL E+ A+N M NP M+EM+KG F ++ MM FF GFVL K+PF+LT FK MLQRGIEL+TLD SYVS+ SW FLV+FG++ L + E++ +A + +G G M FD K+Y + L + H +ALE EK+LLG+ P L
Sbjct: 22 EIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKSEKMATVEQLKPMNTVKRAQITRVNSKFITPDAFAVRKHYFTASQKKDGMKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI------LGEQSASDDTKAMQMQMGMGAAPNMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGETIPEKLKV 274 The following BLAST results are available for this feature:
BLAST of EWM25752.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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