EWM30192.1, cds491 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30192.1 vs. NCBI_GenBank
Match: gi|585112850|gb|EWM30192.1| (ApaG domain protein [Nannochloropsis gaditana]) HSP 1 Score: 678.322 bits (1749), Expect = 0.000e+0 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0
Query: 1 MAHTISKDHSRLVFCLYRLLLRDARRVRHSRAPFVFLQERPSRERYSHLWEITPDYDANVLDNLLPSYLRHELTTCELKAQDLERIIKANFRRFRSLGTSEESPNPRHQVPLPSGPPATPTESPSHSSGHSRRRSSRMRGANITPIPPPTLDQVLDDTMALTRTMAEQLSLFESTSVTESYGIRVIATATTALDQQQQQQQQQQQQMQQSGAVQPPPPYFFFYTIRVENRNRRASVQLMGRHWIIQDEQGRETDSVPKGSIGRYRGRGRDGPWGGKAMLDSWSSSWRLLPTQDEVSLAFSCTMWRWKRGPNPCASSSPPYMPVGTLAAD 329
MAHTISKDHSRLVFCLYRLLLRDARRVRHSRAPFVFLQERPSRERYSHLWEITPDYDANVLDNLLPSYLRHELTTCELKAQDLERIIKANFRRFRSLGTSEESPNPRHQVPLPSGPPATPTESPSHSSGHSRRRSSRMRGANITPIPPPTLDQVLDDTMALTRTMAEQLSLFESTSVTESYGIRVIATATTALDQQQQQQQQQQQQMQQSGAVQPPPPYFFFYTIRVENRNRRASVQLMGRHWIIQDEQGRETDSVPKGSIGRYRGRGRDGPWGGKAMLDSWSSSWRLLPTQDEVSLAFSCTMWRWKRGPNPCASSSPPYMPVGTLAAD
Sbjct: 1 MAHTISKDHSRLVFCLYRLLLRDARRVRHSRAPFVFLQERPSRERYSHLWEITPDYDANVLDNLLPSYLRHELTTCELKAQDLERIIKANFRRFRSLGTSEESPNPRHQVPLPSGPPATPTESPSHSSGHSRRRSSRMRGANITPIPPPTLDQVLDDTMALTRTMAEQLSLFESTSVTESYGIRVIATATTALDQQQQQQQQQQQQMQQSGAVQPPPPYFFFYTIRVENRNRRASVQLMGRHWIIQDEQGRETDSVPKGSIGRYRGRGRDGPWGGKAMLDSWSSSWRLLPTQDEVSLAFSCTMWRWKRGPNPCASSSPPYMPVGTLAAD 329
BLAST of EWM30192.1 vs. NCBI_GenBank
Match: gi|553180778|ref|XP_005853461.1| (hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526] >gi|422295599|gb|EKU22898.1| hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 526.554 bits (1355), Expect = 0.000e+0 Identity = 256/262 (97.71%), Postives = 257/262 (98.09%), Query Frame = 0
Query: 1 MAHTISKDHSRLVFCLYRLLLRDARRVRHSRAPFVFLQERPSRERYSHLWEITPDYDANVLDNLLPSYLRHELTTCELKAQDLERIIKANFRRFRSLGTSEESPNPRHQVPLPSGPPATPTESPSHSSGHSRRRSSRMRGANITPIPPPTLDQVLDDTMALTRTMAEQLSLFESTSVTESYGIRVIATATTALDQQQQQQQQQQQQMQQSGAVQPPPPYFFFYTIRVENRNRRASVQLMGRHWIIQDEQGRETDSVPKGSIG 262
MAHTISKDHSRLVFCLYRLLLRDARRVRHSRAPFVFLQERPSRERYSHLWEITPDYDANVLDNLLPSYLRHELTTCELKAQDLERIIKANFRRFRSLGTSEESPNP+H V LPSGPPATPTESP HSSGHSRRRSSRMRGANI PIPPPTLDQVLDDTMALTRTMAEQLSLFESTSVTESYGIRVIATATTALDQQQQQQQQQQQQMQQSGAVQPPPPYFFFYTIRVENRNRRASVQLMGRHWIIQDEQGRETDSVPKGSI
Sbjct: 74 MAHTISKDHSRLVFCLYRLLLRDARRVRHSRAPFVFLQERPSRERYSHLWEITPDYDANVLDNLLPSYLRHELTTCELKAQDLERIIKANFRRFRSLGTSEESPNPKHHVTLPSGPPATPTESPRHSSGHSRRRSSRMRGANIMPIPPPTLDQVLDDTMALTRTMAEQLSLFESTSVTESYGIRVIATATTALDQQQQQQQQQQQQMQQSGAVQPPPPYFFFYTIRVENRNRRASVQLMGRHWIIQDEQGRETDSVPKGSIA 335 The following BLAST results are available for this feature:
BLAST of EWM30192.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|