EWM25761.1, cds4906 (CDS) Nannochloropsis gaditana

Overview
NameEWM25761.1
Unique Namecds4906
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:669092..669598 +

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Properties
Property NameValue
Protein idEWM25761.1
ProductRibosomal protein L32p
Orig transcript idgnl|cribi|Naga_100168g8.5623.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:669092..669598 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015934large ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR011332Ribosomal_zn-bd
IPR002677Ribosomal_L32p
Homology
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BLAST of EWM25761.1 vs. NCBI_GenBank
Match: gi|585107626|gb|EWM25761.1| (Ribosomal protein L32p [Nannochloropsis gaditana])

HSP 1 Score: 348.206 bits (892), Expect = 2.075e-121
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 
Query:    1 MAIQRLWGHLQREGRKWVREMLSVVPPPLRLVQHPSLVQGLYPATQPTFPLELSDGYGIIPLEQDEVGFERGSEDLGRSLWEEAFLRMAVPKKKVSHRRQRRKLVRYDCENIVHTYTCPACGKPKLRHRLCDDYERCAAQQPSKYRRPTTGREGPTGRATEAGEGNNA 168
            MAIQRLWGHLQREGRKWVREMLSVVPPPLRLVQHPSLVQGLYPATQPTFPLELSDGYGIIPLEQDEVGFERGSEDLGRSLWEEAFLRMAVPKKKVSHRRQRRKLVRYDCENIVHTYTCPACGKPKLRHRLCDDYERCAAQQPSKYRRPTTGREGPTGRATEAGEGNNA
Sbjct:    1 MAIQRLWGHLQREGRKWVREMLSVVPPPLRLVQHPSLVQGLYPATQPTFPLELSDGYGIIPLEQDEVGFERGSEDLGRSLWEEAFLRMAVPKKKVSHRRQRRKLVRYDCENIVHTYTCPACGKPKLRHRLCDDYERCAAQQPSKYRRPTTGREGPTGRATEAGEGNNA 168
The following BLAST results are available for this feature:
BLAST of EWM25761.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107626|gb|EWM25761.1|2.075e-121100.00Ribosomal protein L32p [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4918rna4918Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications