EWM25765.1, cds4901 (CDS) Nannochloropsis gaditana

BLAST of EWM25765.1 vs. NCBI_GenBank
Match: gi|585107630|gb|EWM25765.1| (light harvesting complex protein [Nannochloropsis gaditana])

HSP 1 Score: 420.239 bits (1079), Expect = 1.054e-148
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0

Query:    1 MKSAMVLVGSLAVASAFVPAAPKMSRTRGMTRMAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYHPLYDGKISPGIKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDLGFGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPFGDGQGFF 205
            MKSAMVLVGSLAVASAFVPAAPKMSRTRGMTRMAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYHPLYDGKISPGIKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDLGFGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPFGDGQGFF
Sbjct:    1 MKSAMVLVGSLAVASAFVPAAPKMSRTRGMTRMAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYHPLYDGKISPGIKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDLGFGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPFGDGQGFF 205          

BLAST of EWM25765.1 vs. NCBI_GenBank
Match: gi|873233856|emb|CEM02552.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 273.478 bits (698), Expect = 1.297e-90
Identity = 137/211 (64.93%), Postives = 164/211 (77.73%), Query Frame = 0

Query:    1 MKSAMVLVGSLAVASAFVPAAPK------MSRTRGMTRMAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYHPLYDGKISPGIKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDLGFGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPFGDGQGFF 205
            M   MV    +A ASAFVP+AP        SR R   RMAV D++G+DVET GVWDPL FSKDE SLYRYRAVELKHGR+AMLAVLG +V+E +HPLYDGK+ PG+KAI ++P   WLQILATI  IEL++GKQD EN+APGDLGFG   NPF+NDP +FA+LQLKE+KNGRLAM+  AG+L+QE +TGQT  +Q+   H+SPFGDGQG F
Sbjct:    1 MMKLMVFAALIAAASAFVPSAPLRGLDKLQSRDRTAPRMAVEDMIGADVETRGVWDPLGFSKDESSLYRYRAVELKHGRVAMLAVLGYFVAELWHPLYDGKVEPGLKAISQVPSAGWLQILATIAAIELSIGKQDFENRAPGDLGFG--INPFENDPVEFAKLQLKEIKNGRLAMIAIAGMLVQELVTGQTTLQQLREGHISPFGDGQGLF 209          

BLAST of EWM25765.1 vs. NCBI_GenBank
Match: gi|298708216|emb|CBJ30555.1| (Light harvesting complex protein [Ectocarpus siliculosus])

HSP 1 Score: 248.825 bits (634), Expect = 7.180e-81
Identity = 120/187 (64.17%), Postives = 150/187 (80.21%), Query Frame = 0

Query:   20 AAPKMSRTRGMTRMAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYHPLYDGKISPGIKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDLG-FGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPFGDGQGFF 205
            A P+ + +  MT+MAVND+LG+DVET GV+DPL + KD+ SL+R RAVELKHGR+AMLAV G   +E +HPLYDGK+SPG+KA+GELP  AW+QIL  I V+ELTVGKQD ENKAPG+LG FG  +NP+ ++P  F++LQLKELKNGRLAML   G ++QE +TGQT  EQ+ + HLSPFGDGQG F
Sbjct:   30 ARPQQATSATMTKMAVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHPLYDGKLSPGLKALGELPLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTAIEQLTSGHLSPFGDGQGAF 216          

BLAST of EWM25765.1 vs. NCBI_GenBank
Match: gi|585113162|gb|EWM30498.1| (light-harvesting protein [Nannochloropsis gaditana])

HSP 1 Score: 214.157 bits (544), Expect = 2.459e-67
Identity = 115/210 (54.76%), Postives = 141/210 (67.14%), Query Frame = 0

Query:    1 MKSAMVLVGSLAVASAFVPAAPKMSRTRGMTRMAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYHPLYDGKISPG-----IKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDLGFGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPFGDGQGFF 205
            MK+A   +  L V++AF+P AP+M+R R + RMAVN+++GSDVET GV+DPL  +KDE SLYR R +ELKHGR+AMLA LG  V  FYH   +   +P       +   E P   W QI   IG IELT+GKQDT N+APGD+GFG  F P  +D E FA LQLKELKNGRLAM+   G  +QE +TGQ   EQ+   H SPFGDGQG F
Sbjct:    1 MKTAFAFLALLGVSTAFMPTAPRMTRGRSV-RMAVNEMIGSDVETNGVFDPLGLAKDEASLYRSRLIELKHGRVAMLACLGTLVQSFYHLPDEVFSNPRPLAALAQVYSERPVAFW-QIFLAIGAIELTIGKQDTANRAPGDVGFGAAFIP--DDAEDFAALQLKELKNGRLAMMAIIGQFVQEKLTGQGPIEQLLEGHFSPFGDGQGAF 206          

BLAST of EWM25765.1 vs. NCBI_GenBank
Match: gi|585110528|gb|EWM28183.1| (light harvesting complex protein [Nannochloropsis gaditana])

HSP 1 Score: 189.504 bits (480), Expect = 1.568e-57
Identity = 105/213 (49.30%), Postives = 146/213 (68.54%), Query Frame = 0

Query:    1 MKSAMVLVGSLAVASAFVPAAPKMSRT----RGMTRMAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYH---PLYDG-KISPGIKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDLGFGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPFGDGQGFF 205
            M  A+VL+G L+ A+AF+PA     ++    + +   +V+D++G+D ETGG+WDPL  S++EGSL +YR  ELKHGR+AM A+LG++V   YH   P++   +    ++ + E    A  QI+  +GVIE T G+Q  E++APGDL FG +F P K++ E F ELQLKELKNGRLAM+ + G LLQE +TGQ   EQ+ A HL+PFGDGQGFF
Sbjct:    1 MMRAVVLLGLLSSAAAFIPATFNTGKSSYARKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQK-EDRAPGDLNFGSSFIP-KSEKE-FEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPFGDGQGFF 210          

BLAST of EWM25765.1 vs. NCBI_GenBank
Match: gi|553181527|ref|XP_005853581.1| (light harvesting complex protein [Nannochloropsis gaditana CCMP526] >gi|422295478|gb|EKU22777.1| light harvesting complex protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 164.081 bits (414), Expect = 1.106e-47
Identity = 93/198 (46.97%), Postives = 133/198 (67.17%), Query Frame = 0

Query:    1 MKSAMVLVGSLAVASAFVPAAPKMSRT----RGMTRMAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYH---PLYDG-KISPGIKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDLGFGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQI 190
            M  A+VL+G L+ A+AF+PA     ++    + +   +V+D++G+D ETGG+WDPL  S++EGSL +YR  ELKHGR+AM A+LG++V   YH   P++   +    ++ + E    A  QI+  +GVIE T G+Q  E++APGDL FG +F P K++ E F ELQLKELKNGRLAM+ + G LLQE +TGQ   EQ+
Sbjct:    1 MMRAVVLLGLLSSAAAFIPATFNTGKSSYARKNLVVASVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQK-EDRAPGDLNFGSSFIP-KSEKE-FEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQV 195          

BLAST of EWM25765.1 vs. NCBI_GenBank
Match: gi|873230095|emb|CEM11606.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 164.081 bits (414), Expect = 1.872e-47
Identity = 102/218 (46.79%), Postives = 133/218 (61.01%), Query Frame = 0

Query:    1 MKSAMVLVGSLAV-ASAFVPAA--PKMSRTRGMTRMA-----VNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYH---PLYDG-KISPGIKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDL-GFGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPFGDGQGFF 205
            MKS +  +  L V A AFVP        R+RG  R A     V+ + G+DVETGGVWDPL  S++E +L  YRA ELKHGR+ M+AVLG+ V  ++    P+++  +    I  + +    A +QIL  IG  EL   +Q  E+  PG L  FG  F P   D  KF ELQ KELKNGRLAM+G +G+L+QE++TGQ   EQI   H+SPFGDGQG+F
Sbjct:    1 MKSVICAIALLVVGAHAFVPPTGFQGALRSRGAARPATTMGAVDQLAGADVETGGVWDPLGLSQNEDALSLYRAAELKHGRVCMMAVLGVIVQTYFQLPDPVFNNPRPLEAIVQVWQQRPEAIIQILLAIGATELYFLRQSPEDP-PGSLQNFGAAFRP--RDEAKFEELQRKELKNGRLAMIGISGMLVQEALTGQGPLEQIQVGHISPFGDGQGYF 215          

BLAST of EWM25765.1 vs. NCBI_GenBank
Match: gi|585112441|gb|EWM29860.1| (light-harvesting protein [Nannochloropsis gaditana])

HSP 1 Score: 160.999 bits (406), Expect = 7.428e-47
Identity = 96/178 (53.93%), Postives = 119/178 (66.85%), Query Frame = 0

Query:   33 MAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYHPLYDGKISPG-IKAIGELPGP---AWLQILATIGVIELTVGKQDTENKAPGDLG-FGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPFGDGQGFF 205
            M+ +D++G DVETGG++DPL FSKDE SLY+YR VELKHGR+AMLA LG  V  + H   D   +P  + A+G+L      A LQI+  I +IE+T GKQD E  APG LG FG  F P      + A +QLKELKNGRLAM+   G  +QE +TGQ   EQI + H+SPFGDGQG F
Sbjct:    1 MSASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDPE-LAPGQLGRFGEAFKP--EGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPFGDGQGLF 175          

BLAST of EWM25765.1 vs. NCBI_GenBank
Match: gi|873224040|emb|CEM27246.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 158.303 bits (399), Expect = 2.706e-45
Identity = 102/199 (51.26%), Postives = 135/199 (67.84%), Query Frame = 0

Query:   15 SAFVPAAPKMS-RTRGMTR-----MAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVS----EFYHPLYD--GKISPGIKAIGELPGPAW--LQILATIGVIELTVGKQDTENKAPGDLGFGYNFNPFKN-DPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPF 198
            +AFVP+AP  S  TR   R     M+V +++G+DVETGGV+DPL FS+DE SL+R RAVELKHGR+AMLA LG +V         P++     +S   K + E P   W   QI+A I  IEL  G+QD ENKAPGDL  GY  + FKN DPE+F + QL+ELKNGRLAM+G  G+++QE +TGQ+ +EQI + +++PF
Sbjct:   20 AAFVPSAPLRSLPTRRALRSTTPKMSVEEMIGADVETGGVFDPLKFSEDEASLFRRRAVELKHGRIAMLACLGYFVQSAGVHLPDPVFSEPRPLSALTKVLTERP---WAAAQIVAAIAAIELGPGRQDYENKAPGDL--GYFGDSFKNSDPEEFRKDQLRELKNGRLAMIGIMGMMVQEGLTGQSVWEQIGSGNINPF 213          

BLAST of EWM25765.1 vs. NCBI_GenBank
Match: gi|298712459|emb|CBJ33233.1| (Light harvesting complex protein. Probably a pseudogene (no EST support, no targeting) [Ectocarpus siliculosus])

HSP 1 Score: 138.658 bits (348), Expect = 4.394e-38
Identity = 80/175 (45.71%), Postives = 115/175 (65.71%), Query Frame = 0

Query:   33 MAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYH-------PLYD-GKISPGIKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDLG-FGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPF 198
            M++ +++G+DVE+GG++DPL FSKDE SL+R RAVELKHGR+AMLAV G+ V  F         P+ +  +    +K +    G   +  L  IGV+ELT+GKQD  ++APG+LG FG    P   D E++ ++Q+ ELK+GRLAMLG  G L+QE +TG+   EQ+   ++ PF
Sbjct:    1 MSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMLAVTGILVQSFVRFPGFPPFPVSNPARPLAVLKGLLSTEGNNVVLFLLGIGVVELTIGKQDYIDRAPGELGEFGAFAKPV--DKEEWDKVQMAELKHGRLAMLGVVGCLVQELVTGEGPVEQLLNGNIFPF 173