EWM30194.1, cds490 (CDS) Nannochloropsis gaditana

Overview
NameEWM30194.1
Unique Namecds490
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1228449..1228829 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30194.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100090g5.8843.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1228449..1228829 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM30194.1 vs. NCBI_GenBank
Match: gi|585112852|gb|EWM30194.1| (hypothetical protein Naga_100090g5 [Nannochloropsis gaditana])

HSP 1 Score: 262.692 bits (670), Expect = 6.083e-89
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
Query:    1 MVKLGGAIAAIFKFLTSPTYAKNDYELAIKTSKDLEHLLEQEWGADGKGLHEKITWVQHSDSPLPDDLMRRMRFLATIRNKLIHDITYTRIEDRARFIETFERSKRELHAILVQRGKKPGPDCAIM 126
            MVKLGGAIAAIFKFLTSPTYAKNDYELAIKTSKDLEHLLEQEWGADGKGLHEKITWVQHSDSPLPDDLMRRMRFLATIRNKLIHDITYTRIEDRARFIETFERSKRELHAILVQRGKKPGPDCAIM
Sbjct:    1 MVKLGGAIAAIFKFLTSPTYAKNDYELAIKTSKDLEHLLEQEWGADGKGLHEKITWVQHSDSPLPDDLMRRMRFLATIRNKLIHDITYTRIEDRARFIETFERSKRELHAILVQRGKKPGPDCAIM 126          
BLAST of EWM30194.1 vs. NCBI_GenBank
Match: gi|673046241|ref|XP_008877081.1| (hypothetical protein H310_11968 [Aphanomyces invadans] >gi|574467295|gb|ETV94319.1| hypothetical protein H310_11968 [Aphanomyces invadans])

HSP 1 Score: 115.161 bits (287), Expect = 7.794e-31
Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 0
Query:   16 TSPTY--AKNDYELAIKTSKDLEHLLEQEWGADGKGLHEKITWVQHSDSPLPDDLMRRMRFLATIRNKLIHDITYTRIEDRARFIETFERSKRELHAILVQRGKKPGPDCAIM 126
            TS  Y  + NDYEL IK SK+LE++LE E+GA GKGLHEKIT V  S SP    L+++MRFLATIRNKLIH+  + RI DR  FI  FE +  EL A++  R      +C++M
Sbjct:    4 TSSKYVHSSNDYELVIKCSKELEYILECEFGATGKGLHEKITAVSGSLSP---QLVKQMRFLATIRNKLIHERGFDRIPDRGHFISQFEAAAGELEALVSARHGGTSSNCSVM 113          
BLAST of EWM30194.1 vs. NCBI_GenBank
Match: gi|1173931455|gb|OQR83853.1| (hypothetical protein ACHHYP_14186 [Achlya hypogyna])

HSP 1 Score: 107.071 bits (266), Expect = 1.156e-27
Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 0
Query:   19 TYAKNDYELAIKTSKDLEHLLEQEWGADGKGLHEKITWVQHSDSPLPDDLMRRMRFLATIRNKLIHDITYTRIEDRARFIETFERSKRELHAIL-VQRGKKPGPDCAIM 126
            T+A NDYEL IK SK+LE++LE ++GA G+GLHEKI+      SP    L+R+MR+LATIRNKLIH+  +  I DR+ FI  FE+S  EL A++  +RG +    C IM
Sbjct:    9 THASNDYELVIKCSKELEYILEADFGATGRGLHEKISSANGDFSP---QLVRQMRYLATIRNKLIHERGFDAIPDRSDFIAKFEQSAAELEALVKARRGNRGDSACRIM 114          
BLAST of EWM30194.1 vs. NCBI_GenBank
Match: gi|1173962142|gb|OQS07949.1| (hypothetical protein THRCLA_00063, partial [Thraustotheca clavata])

HSP 1 Score: 111.694 bits (278), Expect = 6.393e-27
Identity = 53/107 (49.53%), Postives = 76/107 (71.03%), Query Frame = 0
Query:   20 YAKNDYELAIKTSKDLEHLLEQEWGADGKGLHEKITWVQHSDSPLPDDLMRRMRFLATIRNKLIHDITYTRIEDRARFIETFERSKRELHAILVQRGKKPGPDCAIM 126
            ++ NDYEL IK SK+LE++LE E+GA G+GLHEKI+    +++P   +L+++MR+LATIRNKLIH+  +  I DRA FI  FE+S +EL +I+  R      +C IM
Sbjct:   10 HSSNDYELVIKCSKELEYILENEFGATGRGLHEKIS---SANAPFSAELIKQMRYLATIRNKLIHERGFDAIPDRANFIMKFEKSAQELESIVKSRQGHGNTNCCIM 113          
BLAST of EWM30194.1 vs. NCBI_GenBank
Match: gi|813154574|ref|XP_012201336.1| (hypothetical protein SPRG_07151 [Saprolegnia parasitica CBS 223.65] >gi|641533913|gb|KDO27879.1| hypothetical protein SPRG_07151 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 105.145 bits (261), Expect = 6.508e-27
Identity = 56/109 (51.38%), Postives = 73/109 (66.97%), Query Frame = 0
Query:   19 TYAKNDYELAIKTSKDLEHLLEQEWGADGKGLHEKITWVQHSDSPLPDDLMRRMRFLATIRNKLIHDITYTRIEDRARFIETFERSKRELHAIL-VQRGKKPGPDCAIM 126
             +A NDYEL IK SK+LE +LE ++ A G+GLHEKI+    S + LP +L R+MR+LATIRNKLIH+  +  I DRA FI  FE+S +EL  I+  +RG      C IM
Sbjct:    9 AHANNDYELVIKCSKELEFILEHDFSATGRGLHEKIS----SATSLPPELARQMRYLATIRNKLIHERGFDAIPDRANFIAKFEQSAKELETIVKARRGPSGDGACRIM 113          
BLAST of EWM30194.1 vs. NCBI_GenBank
Match: gi|669137374|ref|XP_008604255.1| (hypothetical protein SDRG_00551 [Saprolegnia diclina VS20] >gi|530744590|gb|EQC42832.1| hypothetical protein SDRG_00551 [Saprolegnia diclina VS20])

HSP 1 Score: 105.145 bits (261), Expect = 7.583e-27
Identity = 56/109 (51.38%), Postives = 73/109 (66.97%), Query Frame = 0
Query:   19 TYAKNDYELAIKTSKDLEHLLEQEWGADGKGLHEKITWVQHSDSPLPDDLMRRMRFLATIRNKLIHDITYTRIEDRARFIETFERSKRELHAIL-VQRGKKPGPDCAIM 126
             +A NDYEL IK SK+LE +LE ++ A G+GLHEKI+    S + LP +L R+MR+LATIRNKLIH+  +  I DRA FI  FE+S +EL  I+  +RG      C IM
Sbjct:    9 AHASNDYELVIKCSKELEFILEHDFSATGRGLHEKIS----SATNLPPELARQMRYLATIRNKLIHERGFDAIPDRANFIAKFEQSAKELETIVKARRGPSGDGACIIM 113          
BLAST of EWM30194.1 vs. NCBI_GenBank
Match: gi|698815008|ref|XP_009840533.1| (hypothetical protein H257_14424 [Aphanomyces astaci] >gi|574104559|gb|ETV70090.1| hypothetical protein H257_14424 [Aphanomyces astaci])

HSP 1 Score: 102.834 bits (255), Expect = 5.607e-26
Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = 0
Query:   16 TSPTY--AKNDYELAIKTSKDLEHLLEQEWGADGKGLHEKITWVQHSDSPLPDDLMRRMRFLATIRNKLIHDITYTRIEDRARFIETFERSKRELHAILVQRGKKPGPDCAIM 126
            TS  Y  + NDYEL IK +K+LE++LE E+GA GKGLHEKI+ V   +  LP  L+++MRFLATIRNKLIH+  + RI DR  FI  FE +  +L+  + +RG     +C +M
Sbjct:    4 TSSQYVHSSNDYELVIKCAKELEYILEAEFGAAGKGLHEKISAV---NGQLPPQLVKQMRFLATIRNKLIHERGFDRIPDRDHFILQFEAAAGDLNERVRERG-GASSNCILM 112          
BLAST of EWM30194.1 vs. NCBI_GenBank
Match: gi|695447260|ref|XP_009534692.1| (hypothetical protein PHYSODRAFT_522589 [Phytophthora sojae] >gi|348670009|gb|EGZ09831.1| hypothetical protein PHYSODRAFT_522589 [Phytophthora sojae])

HSP 1 Score: 95.5153 bits (236), Expect = 6.588e-23
Identity = 48/114 (42.11%), Postives = 78/114 (68.42%), Query Frame = 0
Query:   19 TYAKNDYELAIKTSKDLEHLLEQEWGADGKGLHEKITWVQHSDSPLPDDLMRRMRFLATIRNKLIHDITYTRIEDRARFIETFERSKRELHAILVQR-----GKKP--GPDCAI 125
             Y+ NDY+LAI+ SK+LE+LLE+E+GA G+GLHE+++ V+   S +P   +R +R++AT+RN+LIHD     + DR +FI+ F+ +  EL+ I+ ++     G++P   P C I
Sbjct:   11 VYSPNDYQLAIEASKELEYLLEKEFGAFGQGLHERVSSVE---SAIPAPTVRSIRYVATLRNRLIHDRDVRALPDRQKFIQKFDDAMVELNIIIEKKRLDAGGREPPAAPGCVI 121          
BLAST of EWM30194.1 vs. NCBI_GenBank
Match: gi|552842917|ref|XP_005850694.1| (hypothetical protein CHLNCDRAFT_50396 [Chlorella variabilis] >gi|307110356|gb|EFN58592.1| hypothetical protein CHLNCDRAFT_50396 [Chlorella variabilis])

HSP 1 Score: 94.3597 bits (233), Expect = 7.960e-23
Identity = 44/94 (46.81%), Postives = 67/94 (71.28%), Query Frame = 0
Query:   27 LAIKTSKDLEHLLEQEWGADGKGLHEKITWVQHSDSPLPDDLMRRMRFLATIRNKLIHDITYTRIEDRARFIETFERSKRELHAILVQRGKKPG 120
            + I+ SKDLE++LE   GA GKGLHEK T VQ     +P  L +++R+LATIRNKL+H+  +  I DR RF+E+++ ++R+L A++ + G+KP 
Sbjct:    1 MVIRASKDLEYILEAYLGAQGKGLHEKCTSVQRF---IPQPLQKKIRYLATIRNKLVHERDFHHIPDRPRFVESYQIAERDLRAVVAKHGRKPA 91          
BLAST of EWM30194.1 vs. NCBI_GenBank
Match: gi|1214693997|gb|OWZ08164.1| (hypothetical protein PHMEG_00019340 [Phytophthora megakarya])

HSP 1 Score: 88.5817 bits (218), Expect = 2.679e-20
Identity = 48/115 (41.74%), Postives = 75/115 (65.22%), Query Frame = 0
Query:   19 TYAKNDYELAIKTSKDLEHLLEQEWGADGKGLHEKITWVQHSDSPLPDDLMRRMRFLATIRNKLIHDITYTRIEDRARFIETFERSKRELHAILVQ-------RGKKPGPDCAIM 126
             Y+ NDY++AI+TSK+LE+LLE E+ A G+GLHEK++ V+   S +P   +R +R++AT+RN+LIHD     + DR  FI+ F+ +  EL+ IL++       RG+ P     I+
Sbjct:   10 VYSNNDYQVAIETSKELEYLLETEFSAHGQGLHEKVSSVE---SAIPVPTVRSIRYVATLRNRLIHDRDMRALPDRLMFIKKFDDAMVELN-ILIEKKRLDAGRGETPSDSGCII 120          
The following BLAST results are available for this feature:
BLAST of EWM30194.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112852|gb|EWM30194.1|6.083e-89100.00hypothetical protein Naga_100090g5 [Nannochloropsi... [more]
gi|673046241|ref|XP_008877081.1|7.794e-3153.10hypothetical protein H310_11968 [Aphanomyces invad... [more]
gi|1173931455|gb|OQR83853.1|1.156e-2751.38hypothetical protein ACHHYP_14186 [Achlya hypogyna... [more]
gi|1173962142|gb|OQS07949.1|6.393e-2749.53hypothetical protein THRCLA_00063, partial [Thraus... [more]
gi|813154574|ref|XP_012201336.1|6.508e-2751.38hypothetical protein SPRG_07151 [Saprolegnia paras... [more]
gi|669137374|ref|XP_008604255.1|7.583e-2751.38hypothetical protein SDRG_00551 [Saprolegnia dicli... [more]
gi|698815008|ref|XP_009840533.1|5.607e-2649.56hypothetical protein H257_14424 [Aphanomyces astac... [more]
gi|695447260|ref|XP_009534692.1|6.588e-2342.11hypothetical protein PHYSODRAFT_522589 [Phytophtho... [more]
gi|552842917|ref|XP_005850694.1|7.960e-2346.81hypothetical protein CHLNCDRAFT_50396 [Chlorella v... [more]
gi|1214693997|gb|OWZ08164.1|2.679e-2041.74hypothetical protein PHMEG_00019340 [Phytophthora ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna490rna490Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications