EWM25830.1, cds4872 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25830.1 vs. NCBI_GenBank
Match: gi|585107696|gb|EWM25829.1| (Protein of unknown function DUF4286 [Nannochloropsis gaditana] >gi|585107697|gb|EWM25830.1| Protein of unknown function DUF4286 [Nannochloropsis gaditana]) HSP 1 Score: 920.613 bits (2378), Expect = 0.000e+0 Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0 Query: 1 MPPHGETDVYHAHYTGLQGRFGTLQLAMMHHLPRLSMRCNSLACKGLFAPFALTFRSQGSSAFPQAASTQRCWPPPHLSHEDGKRSILDAMSEPSYPHLADRPYLRQPIPLTSPNDPANRIKYEVTLEIDEDIVEGYLAWIQEGHIQEVMALPGFVGWNISASEDSIAASRGIHGQRRVVFVEQYEVESREFLEKYFVKYAQRIRDDHSRMWEGKFAASRRILHTFGRQTDKEAELWKQRDAKNSFRLNNLRYQVDRVPRFTSEGLKVQALPSSLWETLKQFYRARRHESVEDRLDPSEISINTWVSPTLRLDLPPALASEVVGTLKPILESWCGVAELESTGISGIRTYLPGATIQEHVDMATTNVVSALINLDQDVKEPWPFEMRDHSGKLHALHMRPGEVVMYESATCAHRRSRPLPPGGYYTNLFLRFKPKGWTFTY 441 MPPHGETDVYHAHYTGLQGRFGTLQLAMMHHLPRLSMRCNSLACKGLFAPFALTFRSQGSSAFPQAASTQRCWPPPHLSHEDGKRSILDAMSEPSYPHLADRPYLRQPIPLTSPNDPANRIKYEVTLEIDEDIVEGYLAWIQEGHIQEVMALPGFVGWNISASEDSIAASRGIHGQRRVVFVEQYEVESREFLEKYFVKYAQRIRDDHSRMWEGKFAASRRILHTFGRQTDKEAELWKQRDAKNSFRLNNLRYQVDRVPRFTSEGLKVQALPSSLWETLKQFYRARRHESVEDRLDPSEISINTWVSPTLRLDLPPALASEVVGTLKPILESWCGVAELESTGISGIRTYLPGATIQEHVDMATTNVVSALINLDQDVKEPWPFEMRDHSGKLHALHMRPGEVVMYESATCAHRRSRPLPPGGYYTNLFLRFKPKGWTFTY Sbjct: 1 MPPHGETDVYHAHYTGLQGRFGTLQLAMMHHLPRLSMRCNSLACKGLFAPFALTFRSQGSSAFPQAASTQRCWPPPHLSHEDGKRSILDAMSEPSYPHLADRPYLRQPIPLTSPNDPANRIKYEVTLEIDEDIVEGYLAWIQEGHIQEVMALPGFVGWNISASEDSIAASRGIHGQRRVVFVEQYEVESREFLEKYFVKYAQRIRDDHSRMWEGKFAASRRILHTFGRQTDKEAELWKQRDAKNSFRLNNLRYQVDRVPRFTSEGLKVQALPSSLWETLKQFYRARRHESVEDRLDPSEISINTWVSPTLRLDLPPALASEVVGTLKPILESWCGVAELESTGISGIRTYLPGATIQEHVDMATTNVVSALINLDQDVKEPWPFEMRDHSGKLHALHMRPGEVVMYESATCAHRRSRPLPPGGYYTNLFLRFKPKGWTFTY 441
BLAST of EWM25830.1 vs. NCBI_GenBank
Match: gi|1189700694|ref|WP_085759061.1| (hypothetical protein [Oceanicoccus sagamiensis] >gi|1189028276|gb|ARN74895.1| hypothetical protein BST96_12680 [Oceanicoccus sagamiensis]) HSP 1 Score: 141.354 bits (355), Expect = 5.060e-34 Identity = 69/180 (38.33%), Postives = 108/180 (60.00%), Query Frame = 0 Query: 258 VPRFTSEGLKVQALPSSLWETLKQFYRARRHESVEDRLDPSEISINTWVSPTLRLDLPPALASEVVGTLKPILESWCGVAELESTGISGIRTYLPGATIQEHVDMATTNVVSALINLDQDVKEPWPFEMRDHSGKLHALHMRPGEVVMYESATCAHRRSRPLPPGGYYTNLFLRFKPKGW 437 +P FT G + +PS +++ +K FY++ +H ++++L SI P+ L+LP L E++ TL P+ E W G +L T I G+R+Y GA + HVD T+++SA+IN+DQ V + WP DH G+LH ++++PGE++ YESA H R PL G + NLF+ +P GW Sbjct: 207 IPAFTEIGFEKFQVPSEIYQKIKAFYQSNKHLEIDEKLGKRLTSIKK-NHPSSYLELPDVLRQEMIDTLAPMFEQWSG-QKLLITSIYGVRSYKKGANLSMHVDRYRTHIISAIINVDQAVTKKWPLHAYDHFGRLHRIYLKPGEMIFYESARVPHGRPTPL-NGKNFANLFIHAQPVGW 383
BLAST of EWM25830.1 vs. NCBI_GenBank
Match: gi|585113156|gb|EWM30492.1| (hypothetical protein Naga_100013g87 [Nannochloropsis gaditana]) HSP 1 Score: 135.961 bits (341), Expect = 1.156e-31 Identity = 72/205 (35.12%), Postives = 112/205 (54.63%), Query Frame = 0 Query: 230 TDKEAELWKQRDAKNSFRLNNLRYQVDRVPRFTSEGLKVQALPSSLWETLKQFYRARRHESVEDRLDPSEISINTWVSPTLRLDLPPALASEVVGTLKPILESWCGVAELESTGISGIRTYLPGATIQEHVDMATTNVVSALINLDQDVKEPWPFEMRDHSGKLHALHMRPGEVVMYESATCAHRRSRPLPPGGYYTNLFLRFKP 434 + +A++W+ R N RL Q V ++T G K +PS L L ++ + +++ ++ +N + T + + V TLKPILESW G +L T GIR Y G+ +++HVD+ T++VSA++N+ QDV E WP + DH G+ H ++M PGE+ +YESAT H R++ L G Y+ NLF F P Sbjct: 258 NENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQAL-RGRYFDNLFAHFAP 461
BLAST of EWM25830.1 vs. NCBI_GenBank
Match: gi|553189959|ref|XP_005855109.1| (prolyl 4-hydroxylase, partial [Nannochloropsis gaditana CCMP526] >gi|422293952|gb|EKU21252.1| prolyl 4-hydroxylase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 135.191 bits (339), Expect = 1.781e-31 Identity = 72/205 (35.12%), Postives = 111/205 (54.15%), Query Frame = 0 Query: 230 TDKEAELWKQRDAKNSFRLNNLRYQVDRVPRFTSEGLKVQALPSSLWETLKQFYRARRHESVEDRLDPSEISINTWVSPTLRLDLPPALASEVVGTLKPILESWCGVAELESTGISGIRTYLPGATIQEHVDMATTNVVSALINLDQDVKEPWPFEMRDHSGKLHALHMRPGEVVMYESATCAHRRSRPLPPGGYYTNLFLRFKP 434 + +A++W+ R N RL Q V ++T G K +PS L L ++ + +++ ++ +N + T + + V TLKPILESW G +L T GIR Y G+ +++HVD+ T++VSA++N+ QDV E WP + DH G+ H + M PGE+ +YESAT H R++ L G Y+ NLF F P Sbjct: 248 NENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFIDMAPGEMCLYESATALHGRTQAL-RGRYFDNLFAHFAP 451
BLAST of EWM25830.1 vs. NCBI_GenBank
Match: gi|569371831|gb|ETO11666.1| (hypothetical protein RFI_25710 [Reticulomyxa filosa]) HSP 1 Score: 129.798 bits (325), Expect = 3.043e-31 Identity = 66/179 (36.87%), Postives = 98/179 (54.75%), Query Frame = 0 Query: 258 VPRFTSEGLKVQALPSSLWETLKQFYRARRHESVEDRLDPSEISINTWVSPTLRLDLPPALASEVVGTLKPILESWCGVAELESTGISGIRTYLPGATIQEHVDMATTNVVSALINLDQ--DVKEPWPFEMRDHSGKLHALHMRPGEVVMYESATCAHRRSRPLPPGGYYTNLFLRFKP 434 V FT+ G L +++ L F++ + + + + +N SPT LP + + ++P LE+W + LE T + GIR Y GA + HVD T+V+SA+IN+D D + WP ++ DH G LH M+PG+V+ YESA C H R +PL PG YY N+F+ FKP Sbjct: 24 VRNFTATGFAPSHLDDEIFQALTDFWKTAQEQGDLNEEGAAGPVMNQQKSPTFMAYLPESERQALTDWIRPKLETWANIPSLELTSLYGIRMYTRGAILGMHVDTCGTHVISAIINVDSKLDQGKDWPLQIYDHEGTLHEFTMKPGDVMFYESAKCGHSRFKPL-PGEYYANIFIHFKP 201
BLAST of EWM25830.1 vs. NCBI_GenBank
Match: gi|299473295|emb|CBN77694.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 127.102 bits (318), Expect = 1.485e-28 Identity = 76/211 (36.02%), Postives = 111/211 (52.61%), Query Frame = 0 Query: 227 GRQTDKEAELWKQRDAKNSFRLNNLRYQVDRVPRFTSEGLKVQALPSSLWETLKQFYRA-RRHESVEDRLDPSEISIN-TWVSPTLRLDLPPALASEVVGTLKPILESWCGVAELESTGISGIRTYLPGATIQEHVDMATTNVVSALINLDQDVKEPWPFEMRDHSGKLHALHMRPGEVVMYESATCAHRRSRPLPPGGYYTNLFLRFKPK 435 G +T ++ R + RL N R Q + +PRFT G K +P +W+ +K +Y +R + P+ TW T R + L ++ G L+PILE W GV EL T G+R Y + + HVD T+ VS ++ +DQDV+E WP + DH+G + + M+P ++V+YESATC H R G YY N F+ FKPK Sbjct: 249 GAETPQDIASRNARRQMDQGRLVNNRKQPEGLPRFTEVGFKKITVPDDVWDLVKTYYEENKRRSGLRTTSSPTTWRRRATW--STCREN--GKLKEQIFGGLRPILEEWSGV-ELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTF-HGNYYANAFVHFKPK 453
BLAST of EWM25830.1 vs. NCBI_GenBank
Match: gi|522049543|ref|WP_020560752.1| (hypothetical protein [Thiothrix flexilis]) HSP 1 Score: 122.479 bits (306), Expect = 6.245e-27 Identity = 70/184 (38.04%), Postives = 102/184 (55.43%), Query Frame = 0 Query: 257 RVPRFTSEGLKVQALPSSLWETLKQFYRARRHESVEDRLDPSEISINTWVS------PTLRLDLPPALASEVVGTLKPILESWCGVAELESTGISGIRTYLPGATIQEHVDMATTNVVSALINLDQDVKEPWPFEMRDHSGKLHALHMRPGEVVMYESATCAHRRSRPLPPGGYYTNLFLRFKP 434 ++P FT EG K LP L++T+ +FY+ + V + D SI T++ P ++L AL + T+ P+LE W + EL+ + I GIR Y GAT++ HVD T+ VS +IN+ Q V + W + DH GK+H + M+PG+V+ YESA H R PL G YY N+F P Sbjct: 291 QLPLFTPEGFKKTRLPDDLFQTITEFYQQGKANMVLEVND----SIGTYIQTTTERHPAKMIELSDALRQTIFTTICPLLEEWTQL-ELKPSAIYGIREYQRGATLKMHVDRIDTHQVSMIINVAQQVDQDWFLHIADHKGKIHKVTMQPGDVIFYESARLQHGRPEPL-EGEYYANIFAHTAP 468
BLAST of EWM25830.1 vs. NCBI_GenBank
Match: gi|585101001|gb|EWM21003.1| (hypothetical protein Naga_100081g21 [Nannochloropsis gaditana]) HSP 1 Score: 118.627 bits (296), Expect = 1.495e-25 Identity = 66/207 (31.88%), Postives = 110/207 (53.14%), Query Frame = 0 Query: 230 TDKEAELWKQRDAKNSFRLNNLRYQVDRVPRFTSEGLKVQALPSSLWETLKQFYRARRHESVEDRLDP---SEISINTWVSPTLRLDLPPALASEVVGTLKPILESWCGVAELESTGISGIRTYLPGATIQEHVDMATTNVVSALINLDQDVKEPWPFEMRDHSGKLHALHMRPGEVVMYESATCAHRRSRPLPPGGYYTNLFLRFK 433 +++ +W+ RD +N R+ Q PR+T+ G K +P ++++ L R+ S E L+P S+ N + +P+ + L A +++ + P L W G +L T GIR Y G+ ++EHVD T+++SA++N+DQDV+E W DH+ H + + PG+ + YESA+ H R PL G + N F+ FK Sbjct: 256 VEEDMNIWRGRDVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVL-----LNRYHSGEHILEPWPKSDCHTNFFEAPSTMVYLSDAEKADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPL-KGKLFANAFVHFK 456
BLAST of EWM25830.1 vs. NCBI_GenBank
Match: gi|1072229833|gb|OEU14567.1| (hypothetical protein FRACYDRAFT_241115 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 119.013 bits (297), Expect = 3.295e-25 Identity = 62/180 (34.44%), Postives = 101/180 (56.11%), Query Frame = 0 Query: 261 FTSEGLKVQALPSSLWETLKQFYRARRHESVEDRLDPSEISINTWVSPTLRLDLPPALASEVVGTLKPILESWCGVAELESTGISGIRTYLPGATIQEHVDMATTNVVSALINLDQD-VKEPWPFEMRDHSGKLHALHMRPGEVVMYESATCAHRRSRPLP---PGGYYTNLFLRFKPKG 436 F+S G V LP+ ++ ++ FY RH V + + +N W + + +P ++ + L ++ W GV E+E T + G+R Y GA + HVD TT+ VS ++N+ QD + PWP E+ DH+ +LH ++M+ G++V YESA H R+RPL G ++ NLF ++PK Sbjct: 318 FSSLGFSVGRLPNDVFASMGSFYYNNRHNVVNEEWVGKGLFVNWWETDIKFIAMPWSIKQKWQHRLNELVSEWSGV-EVEETSMYGMRQYEQGARLLSHVDRLTTHAVSLIVNIAQDNLANPWPVEIFDHADRLHEVNMKAGDIVYYESAKNLHSRNRPLTCKEGGCHFVNLFTHYRPKA 496
BLAST of EWM25830.1 vs. NCBI_GenBank
Match: gi|676383129|ref|XP_009034843.1| (hypothetical protein AURANDRAFT_62497 [Aureococcus anophagefferens] >gi|323454127|gb|EGB09997.1| hypothetical protein AURANDRAFT_62497 [Aureococcus anophagefferens]) HSP 1 Score: 117.472 bits (293), Expect = 5.819e-25 Identity = 73/196 (37.24%), Postives = 108/196 (55.10%), Query Frame = 0 Query: 254 QVDRVPRFTSEGLKVQALPSSLWETLKQFY-----RARRHESVEDRLDPSEISINTWVSPTLRLDLPPALASEVVGTLKPILESWC-GVAELESTGISGIRTYLPGATIQEHVDMATTNVVSALINLDQ-DVKEPWPFEMRDHSGKLHALHMRPGEVVMYESATCAHRRSRPLPPGGYYTNLFLRFKPK-GWTFTY 441 Q+ P T++G K+ P +++ + QFY R RR E+ L ++ I TW +P L L + V LK ++E W L+ T G+RTY GA + HVD A T+VVS ++N+ Q V EPWP E+ DH+GKLHA++M PG+ ++YESA H R RP G Y N+F+ + P+ W+ + Sbjct: 314 QIAVTPNVTADGFKLIKTPPHVYDKVIQFYNASHDRIRRPEADGGPL-YNQRRIQTWHTP-----LEGRLKAYVFDELKRLMEDWAPTTVPLKGTSAYGVRTYERGAYLHLHVDTANTHVVSGIMNVAQAGVDEPWPLEILDHAGKLHAVNMEPGDFLLYESARLLHGRPRPF-RGDSYANIFVHYMPEHDWSVDF 502 The following BLAST results are available for this feature:
BLAST of EWM25830.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|