EWM25802.1, cds4863 (CDS) Nannochloropsis gaditana

Overview
NameEWM25802.1
Unique Namecds4863
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:561835..562034 -
Alignment locationCM002464.1:560876..561683 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25802.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100021g51.8745.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:561835..562034 -
CM002464.1supercontigCM002464.1:560876..561683 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0046872metal ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR006121HeavyMe-assoc_HMA
Homology
BLAST of EWM25802.1 vs. NCBI_GenBank
Match: gi|585107669|gb|EWM25802.1| (hypothetical protein Naga_100021g51 [Nannochloropsis gaditana])

HSP 1 Score: 684.1 bits (1764), Expect = 0.000e+0
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
Query:    1 MVRNCRLPVSTFLPSSKYPRVGATGGPGTDRPLGVHKGNEIPEVSSSLLYVPALNSKIEFNARCYKSLTDLSDVEMDLALCNQIVPFPRGSSVARRNRLWQSFTMPAPGIATTILVGLMGLLFLLCRKGRIRKARLLELLAASAGGLLSSSCCAVQVLLNTFSIGCAGFAALDHLRPFFISLTFSTLIYKTIVYDLRTYKQLWRSSPSWLVAVILTMFPTIMRKLNRGMGLRELTMLSGSLPCENKAASPTVILQYKVEGMKCEACANGLKLALQALQSDVRARVFYEKGIVFLIRMQKGADPDVETARDLEQGVAQVMKERGYRCRLERTALSL 335
            MVRNCRLPVSTFLPSSKYPRVGATGGPGTDRPLGVHKGNEIPEVSSSLLYVPALNSKIEFNARCYKSLTDLSDVEMDLALCNQIVPFPRGSSVARRNRLWQSFTMPAPGIATTILVGLMGLLFLLCRKGRIRKARLLELLAASAGGLLSSSCCAVQVLLNTFSIGCAGFAALDHLRPFFISLTFSTLIYKTIVYDLRTYKQLWRSSPSWLVAVILTMFPTIMRKLNRGMGLRELTMLSGSLPCENKAASPTVILQYKVEGMKCEACANGLKLALQALQSDVRARVFYEKGIVFLIRMQKGADPDVETARDLEQGVAQVMKERGYRCRLERTALSL
Sbjct:    1 MVRNCRLPVSTFLPSSKYPRVGATGGPGTDRPLGVHKGNEIPEVSSSLLYVPALNSKIEFNARCYKSLTDLSDVEMDLALCNQIVPFPRGSSVARRNRLWQSFTMPAPGIATTILVGLMGLLFLLCRKGRIRKARLLELLAASAGGLLSSSCCAVQVLLNTFSIGCAGFAALDHLRPFFISLTFSTLIYKTIVYDLRTYKQLWRSSPSWLVAVILTMFPTIMRKLNRGMGLRELTMLSGSLPCENKAASPTVILQYKVEGMKCEACANGLKLALQALQSDVRARVFYEKGIVFLIRMQKGADPDVETARDLEQGVAQVMKERGYRCRLERTALSL 335          
BLAST of EWM25802.1 vs. NCBI_GenBank
Match: gi|1183482108|gb|ORZ05903.1| (hypothetical protein BCR41DRAFT_361402 [Lobosporangium transversale])

HSP 1 Score: 83.1889 bits (204), Expect = 9.115e-15
Identity = 76/229 (33.19%), Postives = 109/229 (47.60%), Query Frame = 0
Query:  134 ARLLELLAASAGGLLSSSCCAVQVLLNTFSIGCAGFAALDHLRPFFISLTFSTLIYKTIVYDL--RTYKQL-----WRSSPSWLVAVILTMFPTIMRKLNRGMGLRELTMLSGSLPCE---------------------NKAASPT---VILQYKV--EGMKCEACANGLKLALQALQSDVRARVFY-EKGIVFLIRMQKGADPDVETARDLEQGVAQVMKERGYRCRL 328
            +R    L A   GLLSSSCC VQ++LN FSIGCAGF+ L   RP F  +T   + Y T+ Y    RT+  L       +SP   +A I    P+   +LN    L +LT+    L  +                     N+A+  T    +L+Y V  EGM CEACAN L+    +      A+VF+ +K + F  +   GA   + +A ++E+ V+QV  +  Y  RL
Sbjct:   28 SRWSSYLPAVVLGLLSSSCCTVQLVLNAFSIGCAGFSILTPFRPVFSVITLLLITYTTVKYRFSSRTFITLSIAILLTASPE--MASIYNRAPSSALQLNLNSVLPDLTLWPPKLLFQKNNFHRHTLATQQETQGALTTNQASFNTPSKALLRYDVHIEGMACEACANRLRQKFISQPGIEHAKVFFDQKRLQFWTKYSPGA--LMYSAHEIEKMVSQV--DNKYLARL 250          
BLAST of EWM25802.1 vs. NCBI_GenBank
Match: gi|545354356|ref|XP_005643012.1| (hypothetical protein COCSUDRAFT_34498 [Coccomyxa subellipsoidea C-169] >gi|384244972|gb|EIE18468.1| hypothetical protein COCSUDRAFT_34498 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 80.1073 bits (196), Expect = 2.303e-14
Identity = 60/161 (37.27%), Postives = 81/161 (50.31%), Query Frame = 0
Query:  145 GGLLSSSCCAVQVLLNTFSIGCAGFAALDHLRPFFISLTFSTLIYKTIVYDLRTYKQLWRSSPSWLVAVILTMFPTIMRKLNRGM--GLRELTMLSGSLPCENKAASPTVILQYKVEGMKCEACANGLKLALQALQSDV-RARVFYEKGIVFLIRMQKGAD 302
            GGLLSSSCC VQ+ LN FS+GCAGF+ L   RP F+ LT ++L Y  +      +    RS  +  +A+ L   P +++  N      +R L + S  +  +       VIL   VEG++C AC   LK AL A    V R  V +E G V L     G D
Sbjct:    2 GGLLSSSCCLVQLALNLFSVGCAGFSVLTPYRPLFMGLTTASLGYSHL-----RHGNPQRSILALGMALSLAGMPELVQLYNESQLRLMRSLPLTSSPVSGDKALTQQQVILH--VEGLRCAACGMRLKQALLAQVGGVQRCEVEFESGRVVLHGQAIGED 155          
BLAST of EWM25802.1 vs. NCBI_GenBank
Match: gi|672817090|gb|KFH61997.1| (hypothetical protein MVEG_12151 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 77.411 bits (189), Expect = 8.196e-13
Identity = 58/191 (30.37%), Postives = 90/191 (47.12%), Query Frame = 0
Query:  144 AGGLLSSSCCAVQVLLNTFSIGCAGFAALDHLRPFFISLTFSTLIYKTIVYDLRTYKQLWRSSPSWLVAVILTMFPTIMRKLNRGMGLRELTMLSGSLPC------------------ENKAASPTV--------------------ILQYK--VEGMKCEACANGLKLALQALQSDVRARVFYEKGIVFL 294
            A GLLSSSCC VQ++LN FSIGCAGF+ L  LRP F++++F  ++Y    Y         R+  + L+ + LT+ P ++  +N+  G   +T  +  LP                   ++ A SP V                    +++Y+  V+GM CEACA+ L+           A V + KG ++L
Sbjct:   32 AIGLLSSSCCVVQLVLNAFSIGCAGFSVLTPLRPVFLAISFGLVLYTVAKYRFSA-----RTFVTLLITLGLTIMPELVAVVNQSSGPHSITS-NLHLPLVHPLVLQWSKYTGIKAYGQSAAVSPKVTPIAVGDSKKPLSSSMGPSNLIKYEVSVQGMACEACASRLRQHFLRQAGVQHANVHFGKGKLYL 216          
BLAST of EWM25802.1 vs. NCBI_GenBank
Match: gi|595498593|gb|EXX78525.1| (hypothetical protein RirG_014220 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 70.0922 bits (170), Expect = 1.311e-10
Identity = 49/169 (28.99%), Postives = 82/169 (48.52%), Query Frame = 0
Query:  140 LAASAGGLLSSSCCAVQVLLNTFSIGCAGFAALDHLRPFFISLTFSTLIYKTIVYDLRTYKQLWRSSPSWLVAVILTMFPTIMRKLNRGMGLRELTMLSGSLPCENKAASPTVILQYKVEGMKCEACANGLKLALQALQSDVRARVFYEKGIVFLIRMQKGADP-DVET 307
            + A   GLL SSCC +Q++LN FSI CAGF+ L   RP F+S T   ++Y    Y L + + L        +++ L+  P ++   N+G    ++T+   +L  E        I   ++ G+ CE CAN +K    +    V ++V++      +  +     P D+ET
Sbjct:   15 IWAITTGLLGSSCCIIQLILNIFSISCAGFSILTPYRPIFLSFTTVLILYTMTKYGLNSKQTLVTLL----ISLSLSTSPELISLYNQG----KITISPFNL--EKPLTEEVEIFVVQINGISCEGCANRIKTQFDSKPFVVDSKVYFNNQSAIVSVIPGNYKPVDIET 173          
BLAST of EWM25802.1 vs. NCBI_GenBank
Match: gi|1069955777|ref|XP_018290190.1| (hypothetical protein PHYBLDRAFT_147124 [Phycomyces blakesleeanus NRRL 1555(-)] >gi|1026587589|gb|OAD72150.1| hypothetical protein PHYBLDRAFT_147124 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 69.707 bits (169), Expect = 1.506e-10
Identity = 47/145 (32.41%), Postives = 74/145 (51.03%), Query Frame = 0
Query:  146 GLLSSSCCAVQVLLNTFSIGCAGFAALDHLRPFFISLTFSTLIYKTIVYDLRTYKQLWRSSPSWLVAVILTMFPTIMRKLNRGMGLRELTMLSGSLPCENKAASPTVILQYKVEGMKCEACANGLKLALQALQSDVRARVFYEKG 290
             LLSSSCC +Q+ LN FS  CAGFA L   RP   ++T   L Y    +  R +K   + + + LV+++L + P I+  +N+     +             A + T ++Q  ++G+ C ACAN +K AL A+     A VF++  
Sbjct:   21 ALLSSSCCIIQLALNFFSFSCAGFAVLTPFRPILTAITIILLTYS---FYARGWKDK-KMAGTTLVSIVLLVSPEIVEWINQNQTQSQFL-----------AVTTTYLVQ--LQGLGCIACANRIKSALLAVDVIESATVFFDNS 148          
BLAST of EWM25802.1 vs. NCBI_GenBank
Match: gi|551665091|ref|XP_005835308.1| (hypothetical protein GUITHDRAFT_105935 [Guillardia theta CCMP2712] >gi|428179457|gb|EKX48328.1| hypothetical protein GUITHDRAFT_105935 [Guillardia theta CCMP2712])

HSP 1 Score: 68.9366 bits (167), Expect = 2.288e-9
Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 0
Query:  146 GLLSSSCCAVQVLLNTFSIGCAGF-AALDHLRPFFISLTFSTLIYKTIVY--DLRTYKQLWRSSPSWLVAVILTMFPTIMRKLNRGMGLRELTMLSGSLP--CENKAASPTVILQYKVEGMKCEACANGLKLALQALQSDVRARVFYEKGIVFLIRMQK 299
            GLLSSSCC +QVLLN  S+GCAGF  AL  LRP  ++   ST+I ++  +  +     Q + +  + L+++++TM P I   L  G  +       G +    E      TV++ +K + M C +CAN ++    +++  V   V  EK    L    K
Sbjct:   56 GLLSSSCCLIQVLLNAMSLGCAGFNTALGPLRPHLLA---STVIAQSFAWYINFPIPHQRFTTMVASLISIVVTMSPEI---LYLGAKMTRSQQKDGEVKERGERDGTGATVVVHFKPKAMGCISCANTVRGVFDSIEGIVTDDVSVEKATATLYVKDK 208          
BLAST of EWM25802.1 vs. NCBI_GenBank
Match: gi|926793255|ref|XP_013905101.1| (hypothetical protein MNEG_1875 [Monoraphidium neglectum] >gi|761976219|gb|KIZ06082.1| hypothetical protein MNEG_1875 [Monoraphidium neglectum])

HSP 1 Score: 67.3958 bits (163), Expect = 3.015e-9
Identity = 54/183 (29.51%), Postives = 92/183 (50.27%), Query Frame = 0
Query:  125 LCRKGRIRKARLLELLAASAGGLLSSSCCAVQVLLNTFSIGCAGFAALDHLRPFFISLTFSTLIYKTIVYDLRTYKQLWRSSPSWLVAVILTMFPTIMRKLNRGMGLRELTMLSGSLPCENKAASPTV-----ILQYK--VEGMKCEACANGLKLALQALQ---------SDVRARVFYEKGI 291
            + ++G   +  L  +L A  GGLLSSSCC VQ++LN+ S+GCAGF+     R     LT   L      + +       R+  + + +V+LT     +  +NR   L++L +   SLP  +    P V     I++++  V+GM+C+ACA  ++ ++ AL          ++ R  V+ E G+
Sbjct:    3 VAKRGAAARTDLAVVLGALTGGLLSSSCCIVQLVLNSLSVGCAGFSVFKPYRNLLRVLTAGMLALLLARHGVNR-----RTIGTVVCSVLLTFSEDALSVINRQGSLQDL-LRHMSLP--HGGGHPAVQRDPAIVRWRVDVDGMRCQACAARIRGSVAALPGVRNATVELAEGRVEVWAEHGV 177          
BLAST of EWM25802.1 vs. NCBI_GenBank
Match: gi|1032642590|gb|OAQ23949.1| (hypothetical protein K457DRAFT_142327 [Mortierella elongata AG-77])

HSP 1 Score: 66.2402 bits (160), Expect = 8.120e-9
Identity = 66/246 (26.83%), Postives = 110/246 (44.72%), Query Frame = 0
Query:  140 LAASAGGLLSSSCCAVQVLLNTFSIGCAGFAALDHLRPFFISLTFSTLIYKTIVYDLR-----------------------TYKQ-----LWRSSPSWLVAVILTM--FPTIMRKLN----------RGMGLRELTMLSGSLP----CENKAASPT---------VILQY--KVEGMKCEACANGLKLALQALQSDVRARVFY-EKGIVFLIRMQKGADPDVETARDLEQGVAQVMKERGYRCRLE 329
            ++A   GLLSSSCC +Q+ LN  S+GCAGF+ L   RP F  LTFS+L+    +Y  R                        Y Q     L R   ++L+    ++   PT +  +            G+   +  + + S+P     +++A  P+         + ++Y  +++GM CEACA+ L+      +   RA VF+ EK +V  +  Q G+   + + R ++  V QV  +  Y  +LE
Sbjct:   29 ISAVTLGLLSSSCCIIQLALNLLSVGCAGFSVLTPYRPLF--LTFSSLLVLVTIYKYRWSSRSALTLALVLTLTTTPEMVAVYNQSSTGSLQRLPDTFLLGAPSSILRLPTFLENVQWSIPALLKAPSGVVTHDEPIAAASVPIQPSSQDQAVGPSGLGSPGVGGMFIKYVIQIDGMACEACASRLRQHFSRQEGIERANVFFDEKKLV--LWTQAGSGSMMLSDRVIKDMVGQV--DAKYTAKLE 268          
BLAST of EWM25802.1 vs. NCBI_GenBank
Match: gi|1183471356|gb|ORY95245.1| (hypothetical protein BCR43DRAFT_492678 [Syncephalastrum racemosum])

HSP 1 Score: 61.6178 bits (148), Expect = 9.029e-8
Identity = 49/177 (27.68%), Postives = 77/177 (43.50%), Query Frame = 0
Query:  146 GLLSSSCCAVQVLLNTFSIGCAGFAALDHLRPFFISLTFSTLIYKTIVYDLRTYKQ---------LWRSSPSWLVAVILTMFPTIMRKLNRGMGLRELTMLSGSLPCENKAASPTVILQYKVEGMKCEACANGLKLALQALQSDVRARVFYEKGIVFLIRMQKGADPDVETARDLEQ 313
             LL+SSCC +Q++LN  SI CAGFA L   RP+F   T +TL   T+ +  +              W       VA +L   P ++R +N                 E+ +   T  +  +++G+ C ACAN +K  L+ +     A VF++     +      A P  E  + +EQ
Sbjct:   17 ALLASSCCVIQLVLNMLSISCAGFAVLTPYRPWF---TLATLATMTLAWQRQKKNHDNNKSRRVLFWTGC----VAAVLLASPELVRYMN-----------------ESASTLDTRPIVLELDGLGCLACANKIKQGLKQVPGVADALVFFDNSTALVKCNAPCAVP--ELVKTVEQ 167          
The following BLAST results are available for this feature:
BLAST of EWM25802.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107669|gb|EWM25802.1|0.000e+0100.00hypothetical protein Naga_100021g51 [Nannochlorops... [more]
gi|1183482108|gb|ORZ05903.1|9.115e-1533.19hypothetical protein BCR41DRAFT_361402 [Lobosporan... [more]
gi|545354356|ref|XP_005643012.1|2.303e-1437.27hypothetical protein COCSUDRAFT_34498 [Coccomyxa s... [more]
gi|672817090|gb|KFH61997.1|8.196e-1330.37hypothetical protein MVEG_12151 [Mortierella verti... [more]
gi|595498593|gb|EXX78525.1|1.311e-1028.99hypothetical protein RirG_014220 [Rhizophagus irre... [more]
gi|1069955777|ref|XP_018290190.1|1.506e-1032.41hypothetical protein PHYBLDRAFT_147124 [Phycomyces... [more]
gi|551665091|ref|XP_005835308.1|2.288e-932.08hypothetical protein GUITHDRAFT_105935 [Guillardia... [more]
gi|926793255|ref|XP_013905101.1|3.015e-929.51hypothetical protein MNEG_1875 [Monoraphidium negl... [more]
gi|1032642590|gb|OAQ23949.1|8.120e-926.83hypothetical protein K457DRAFT_142327 [Mortierella... [more]
gi|1183471356|gb|ORY95245.1|9.029e-827.68hypothetical protein BCR43DRAFT_492678 [Syncephala... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4875rna4875Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications