EWM25812.1, cds4858 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25812.1 vs. NCBI_GenBank
Match: gi|585107679|gb|EWM25812.1| (hypothetical protein Naga_100021g45 [Nannochloropsis gaditana]) HSP 1 Score: 1448.34 bits (3748), Expect = 0.000e+0 Identity = 699/699 (100.00%), Postives = 699/699 (100.00%), Query Frame = 0
Query: 1 MAPANVTPILKGVVAYCHVFLEDGLDVSSAVEKQVKELGGSTTRRIAASSHVFLSSNVDYAIYTEARASQKRLVTSEWLEVCKAIGERVSTVCFEPVAPSPPAFNLKKREKYTSTSAARRRRSNKTSYETLDNEHAKLPSPSAKCFSSSQMKDPLLQQEASRRIRGRRRSSAAAKKLRYQRDLSPKIEQAETCSRLQRSINDSVGHELARNSHVTPQQSTGEDSMSHEFSAVDGSNDNCKTSLHSSIMVAKRYLAEELDQNDTSLVPMNEDGEKRYTQAQLGDPNDGANITLRAPRASGLTKGKVANPKGVAYKVNGRKIQPEEKVETEKRKPDSAFTTMCSDGWHCARCTFKNRARAKVCDVCLLQREEAPMDLNDAQSNGKARMTSTSFALPPHKKLRHDPSAQARRSRISHNDEKASMRPKLIDATNRKSEPTSSALPSSSFKVRHKGKVEELPLGTHQKQEDAPEPRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQRRVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKRKRTGAWLRALLDDYRVVEPRFLYDGIDAGALAKNRAEYAISVAKSNMGAGRE 699
MAPANVTPILKGVVAYCHVFLEDGLDVSSAVEKQVKELGGSTTRRIAASSHVFLSSNVDYAIYTEARASQKRLVTSEWLEVCKAIGERVSTVCFEPVAPSPPAFNLKKREKYTSTSAARRRRSNKTSYETLDNEHAKLPSPSAKCFSSSQMKDPLLQQEASRRIRGRRRSSAAAKKLRYQRDLSPKIEQAETCSRLQRSINDSVGHELARNSHVTPQQSTGEDSMSHEFSAVDGSNDNCKTSLHSSIMVAKRYLAEELDQNDTSLVPMNEDGEKRYTQAQLGDPNDGANITLRAPRASGLTKGKVANPKGVAYKVNGRKIQPEEKVETEKRKPDSAFTTMCSDGWHCARCTFKNRARAKVCDVCLLQREEAPMDLNDAQSNGKARMTSTSFALPPHKKLRHDPSAQARRSRISHNDEKASMRPKLIDATNRKSEPTSSALPSSSFKVRHKGKVEELPLGTHQKQEDAPEPRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQRRVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKRKRTGAWLRALLDDYRVVEPRFLYDGIDAGALAKNRAEYAISVAKSNMGAGRE
Sbjct: 1 MAPANVTPILKGVVAYCHVFLEDGLDVSSAVEKQVKELGGSTTRRIAASSHVFLSSNVDYAIYTEARASQKRLVTSEWLEVCKAIGERVSTVCFEPVAPSPPAFNLKKREKYTSTSAARRRRSNKTSYETLDNEHAKLPSPSAKCFSSSQMKDPLLQQEASRRIRGRRRSSAAAKKLRYQRDLSPKIEQAETCSRLQRSINDSVGHELARNSHVTPQQSTGEDSMSHEFSAVDGSNDNCKTSLHSSIMVAKRYLAEELDQNDTSLVPMNEDGEKRYTQAQLGDPNDGANITLRAPRASGLTKGKVANPKGVAYKVNGRKIQPEEKVETEKRKPDSAFTTMCSDGWHCARCTFKNRARAKVCDVCLLQREEAPMDLNDAQSNGKARMTSTSFALPPHKKLRHDPSAQARRSRISHNDEKASMRPKLIDATNRKSEPTSSALPSSSFKVRHKGKVEELPLGTHQKQEDAPEPRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQRRVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKRKRTGAWLRALLDDYRVVEPRFLYDGIDAGALAKNRAEYAISVAKSNMGAGRE 699
BLAST of EWM25812.1 vs. NCBI_GenBank
Match: gi|1214672114|gb|OWY95694.1| (hypothetical protein PHMEG_00034236 [Phytophthora megakarya]) HSP 1 Score: 83.5741 bits (205), Expect = 3.469e-13 Identity = 66/223 (29.60%), Postives = 103/223 (46.19%), Query Frame = 0
Query: 470 PRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQR---RVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKR-KRTGAWLRALLDDYRVVEPRFLYDGIDAGALAKNRAEYAIS 688
PR + ++GV + R L ++ N E G R++ + D +A THL+V K+ RRT+K+LFA+ GA IVT DW S +E LPE + ++ F R + ESR I +VGP PS +L L+ AGG+ + A + + A +R +RTG RVV ++++D I L ++ A+Y +
Sbjct: 259 PRNVFGITGVSAEARGVLQCAIHAIDTNMANEAGYRKA-----RIVKSVDYAAGVTHLIVGKD--VRRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKYSREHPESRQILKGMKFFVGPNLDPSREVLQSLVQVAGGEICNQISVADICICG---------DASLFRRAQRTG---------IRVVTSKWVFDSIATMKL-EDEAQYVFT 455
BLAST of EWM25812.1 vs. NCBI_GenBank
Match: gi|970641794|gb|KUF83710.1| (Microcephalin [Phytophthora nicotianae] >gi|970651415|gb|KUF90240.1| hypothetical protein AM588_10002613 [Phytophthora nicotianae]) HSP 1 Score: 81.6481 bits (200), Expect = 2.742e-12 Identity = 61/208 (29.33%), Postives = 96/208 (46.15%), Query Frame = 0
Query: 470 PRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQR---RVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKR-KRTGAWLRALLDDYRVVEPRFLYDGI 673
PR + ++GV + R L ++ N E G R++ + D +A THL+V R+ +RT+K+LFA+ GA IVT DW S +E LPE + ++ F R + ESR I +VG PS +L L+ AGG+ + + A + + A +R +RTG RVV ++++D I
Sbjct: 620 PRNVFGITGVSAEARGVLQCAIHAIDANMANESGYRKA-----RVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICICG---------DASLFRRAQRTG---------IRVVTAKWVFDSI 802
BLAST of EWM25812.1 vs. NCBI_GenBank
Match: gi|570337798|gb|ETO85746.1| (hypothetical protein F444_00632 [Phytophthora parasitica P1976]) HSP 1 Score: 81.6481 bits (200), Expect = 2.775e-12 Identity = 61/208 (29.33%), Postives = 96/208 (46.15%), Query Frame = 0
Query: 470 PRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQR---RVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKR-KRTGAWLRALLDDYRVVEPRFLYDGI 673
PR + ++GV + R L ++ N E G R++ + D +A THL+V R+ +RT+K+LFA+ GA IVT DW S +E LPE + ++ F R + ESR I +VG PS +L L+ AGG+ + + A + + A +R +RTG RVV ++++D I
Sbjct: 663 PRNVFGITGVSAEARGVLQCAIHAIDANMANESGYRKA-----RVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICICG---------DASLFRRAQRTG---------IRVVTAKWVFDSI 845
BLAST of EWM25812.1 vs. NCBI_GenBank
Match: gi|675162575|ref|XP_008890172.1| (hypothetical protein PPTG_00528 [Phytophthora parasitica INRA-310] >gi|568109466|gb|ETN24073.1| hypothetical protein PPTG_00528 [Phytophthora parasitica INRA-310]) HSP 1 Score: 81.6481 bits (200), Expect = 2.799e-12 Identity = 61/208 (29.33%), Postives = 96/208 (46.15%), Query Frame = 0
Query: 470 PRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQR---RVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKR-KRTGAWLRALLDDYRVVEPRFLYDGI 673
PR + ++GV + R L ++ N E G R++ + D +A THL+V R+ +RT+K+LFA+ GA IVT DW S +E LPE + ++ F R + ESR I +VG PS +L L+ AGG+ + + A + + A +R +RTG RVV ++++D I
Sbjct: 663 PRNVFGITGVSAEARGVLQCAIHAIDANMANESGYRKA-----RVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICICGD---------ASLFRRAQRTG---------IRVVTAKWVFDSI 845
BLAST of EWM25812.1 vs. NCBI_GenBank
Match: gi|568059885|gb|ETM56443.1| (hypothetical protein L914_00593 [Phytophthora parasitica]) HSP 1 Score: 81.6481 bits (200), Expect = 2.893e-12 Identity = 61/208 (29.33%), Postives = 96/208 (46.15%), Query Frame = 0
Query: 470 PRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQR---RVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKR-KRTGAWLRALLDDYRVVEPRFLYDGI 673
PR + ++GV + R L ++ N E G R++ + D +A THL+V R+ +RT+K+LFA+ GA IVT DW S +E LPE + ++ F R + ESR I +VG PS +L L+ AGG+ + + A + + A +R +RTG RVV ++++D I
Sbjct: 689 PRNVFGITGVSAEARGVLQCAIHAIDANMANESGYRKA-----RVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICICG---------DASLFRRAQRTG---------IRVVTAKWVFDSI 871
BLAST of EWM25812.1 vs. NCBI_GenBank
Match: gi|567971769|gb|ETK96769.1| (hypothetical protein L915_00595 [Phytophthora parasitica]) HSP 1 Score: 81.6481 bits (200), Expect = 2.918e-12 Identity = 61/208 (29.33%), Postives = 96/208 (46.15%), Query Frame = 0
Query: 470 PRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQR---RVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKR-KRTGAWLRALLDDYRVVEPRFLYDGI 673
PR + ++GV + R L ++ N E G R++ + D +A THL+V R+ +RT+K+LFA+ GA IVT DW S +E LPE + ++ F R + ESR I +VG PS +L L+ AGG+ + + A + + A +R +RTG RVV ++++D I
Sbjct: 689 PRNVFGITGVSAEARGVLQCAIHAIDANMANESGYRKA-----RVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICICG---------DASLFRRAQRTG---------IRVVTAKWVFDSI 871
BLAST of EWM25812.1 vs. NCBI_GenBank
Match: gi|570998568|gb|ETP54757.1| (hypothetical protein F442_00612 [Phytophthora parasitica P10297]) HSP 1 Score: 81.6481 bits (200), Expect = 2.943e-12 Identity = 61/208 (29.33%), Postives = 96/208 (46.15%), Query Frame = 0
Query: 470 PRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQR---RVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKR-KRTGAWLRALLDDYRVVEPRFLYDGI 673
PR + ++GV + R L ++ N E G R++ + D +A THL+V R+ +RT+K+LFA+ GA IVT DW S +E LPE + ++ F R + ESR I +VG PS +L L+ AGG+ + + A + + A +R +RTG RVV ++++D I
Sbjct: 689 PRNVFGITGVSAEARGVLQCAIHAIDANMANESGYRKA-----RVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICICG---------DASLFRRAQRTG---------IRVVTAKWVFDSI 871
BLAST of EWM25812.1 vs. NCBI_GenBank
Match: gi|570961783|gb|ETP26762.1| (hypothetical protein F441_00629 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 81.6481 bits (200), Expect = 2.968e-12 Identity = 61/208 (29.33%), Postives = 96/208 (46.15%), Query Frame = 0
Query: 470 PRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQR---RVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKR-KRTGAWLRALLDDYRVVEPRFLYDGI 673
PR + ++GV + R L ++ N E G R++ + D +A THL+V R+ +RT+K+LFA+ GA IVT DW S +E LPE + ++ F R + ESR I +VG PS +L L+ AGG+ + + A + + A +R +RTG RVV ++++D I
Sbjct: 689 PRNVFGITGVSAEARGVLQCAIHAIDANMANESGYRKA-----RVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICICG---------DASLFRRAQRTG---------IRVVTAKWVFDSI 871
BLAST of EWM25812.1 vs. NCBI_GenBank
Match: gi|568000092|gb|ETL50118.1| (hypothetical protein L916_00599 [Phytophthora parasitica]) HSP 1 Score: 81.6481 bits (200), Expect = 2.968e-12 Identity = 61/208 (29.33%), Postives = 96/208 (46.15%), Query Frame = 0
Query: 470 PRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQR---RVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKR-KRTGAWLRALLDDYRVVEPRFLYDGI 673
PR + ++GV + R L ++ N E G R++ + D +A THL+V R+ +RT+K+LFA+ GA IVT DW S +E LPE + ++ F R + ESR I +VG PS +L L+ AGG+ + + A + + A +R +RTG RVV ++++D I
Sbjct: 689 PRNVFGITGVSAEARGVLQCAIHAIDANMANESGYRKA-----RVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICICG---------DASLFRRAQRTG---------IRVVTAKWVFDSI 871 The following BLAST results are available for this feature:
BLAST of EWM25812.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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