EWM25800.1, cds4855 (CDS) Nannochloropsis gaditana

Overview
NameEWM25800.1
Unique Namecds4855
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:540697..542394 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25800.1
Productacyl- synthetase family member mitochondrial
Orig transcript idgnl|cribi|Naga_100021g41.8743.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:540697..542394 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR020845AMP-binding_CS
IPR025110AMP-bd_C
IPR000873AMP-dep_Synth/Lig
Homology
BLAST of EWM25800.1 vs. NCBI_GenBank
Match: gi|585107667|gb|EWM25800.1| (acyl- synthetase family member mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 1165.98 bits (3015), Expect = 0.000e+0
Identity = 565/565 (100.00%), Postives = 565/565 (100.00%), Query Frame = 0
Query:    1 MKQLPLPSLQIFRQLVDHGPKIATTSSKGGFNLTYSEILQESALIAARLGRTVISSPSTSPSTFRPIALLAPQDHTFCLGFMGVLQAGGAVVPIYSRSPQREIEFILQDSGCAQVLLHPEFRSNLTPLLRGSKGLDIEVVDLIPGTDQSDLEKIAAMRMGKDKAAMLGHQYSEIVEWIESSENADAVVVYTSGTTGRPKGVVKTHAQLAEMCKGVVKAWNYAPTDRVLEFLPLHHLHGLLNKCLAVLWAGGVVEFLGSANANAIWDRLADPTKPMLSMFHAVPTIYALMLEELESGRMDEASQKRALQHLRQMRLIVSGSAALPQCRFLKWEALTGHRILERYGTTEAGMILSNPLTPVSSRFPGHVGAPFPGVDVRLVDPETEADVTREPGKQGEVRVRSEHGLFSRYHNRSEVTRKAFDEDNWYKTGDLGKYDPEKGFKIVGRLSADILNSGGYKISALEIEAAIQEHEQVAEVVVLGRCHSKWGDEVVAVVRIKETAMRSANVSGNPLEKRTGLLTTEGLHDFLASRLASHMLPRTMYIVNLIPKNAMGKVDKRVLLEQLGK 565
            MKQLPLPSLQIFRQLVDHGPKIATTSSKGGFNLTYSEILQESALIAARLGRTVISSPSTSPSTFRPIALLAPQDHTFCLGFMGVLQAGGAVVPIYSRSPQREIEFILQDSGCAQVLLHPEFRSNLTPLLRGSKGLDIEVVDLIPGTDQSDLEKIAAMRMGKDKAAMLGHQYSEIVEWIESSENADAVVVYTSGTTGRPKGVVKTHAQLAEMCKGVVKAWNYAPTDRVLEFLPLHHLHGLLNKCLAVLWAGGVVEFLGSANANAIWDRLADPTKPMLSMFHAVPTIYALMLEELESGRMDEASQKRALQHLRQMRLIVSGSAALPQCRFLKWEALTGHRILERYGTTEAGMILSNPLTPVSSRFPGHVGAPFPGVDVRLVDPETEADVTREPGKQGEVRVRSEHGLFSRYHNRSEVTRKAFDEDNWYKTGDLGKYDPEKGFKIVGRLSADILNSGGYKISALEIEAAIQEHEQVAEVVVLGRCHSKWGDEVVAVVRIKETAMRSANVSGNPLEKRTGLLTTEGLHDFLASRLASHMLPRTMYIVNLIPKNAMGKVDKRVLLEQLGK
Sbjct:    1 MKQLPLPSLQIFRQLVDHGPKIATTSSKGGFNLTYSEILQESALIAARLGRTVISSPSTSPSTFRPIALLAPQDHTFCLGFMGVLQAGGAVVPIYSRSPQREIEFILQDSGCAQVLLHPEFRSNLTPLLRGSKGLDIEVVDLIPGTDQSDLEKIAAMRMGKDKAAMLGHQYSEIVEWIESSENADAVVVYTSGTTGRPKGVVKTHAQLAEMCKGVVKAWNYAPTDRVLEFLPLHHLHGLLNKCLAVLWAGGVVEFLGSANANAIWDRLADPTKPMLSMFHAVPTIYALMLEELESGRMDEASQKRALQHLRQMRLIVSGSAALPQCRFLKWEALTGHRILERYGTTEAGMILSNPLTPVSSRFPGHVGAPFPGVDVRLVDPETEADVTREPGKQGEVRVRSEHGLFSRYHNRSEVTRKAFDEDNWYKTGDLGKYDPEKGFKIVGRLSADILNSGGYKISALEIEAAIQEHEQVAEVVVLGRCHSKWGDEVVAVVRIKETAMRSANVSGNPLEKRTGLLTTEGLHDFLASRLASHMLPRTMYIVNLIPKNAMGKVDKRVLLEQLGK 565          
BLAST of EWM25800.1 vs. NCBI_GenBank
Match: gi|970630206|gb|KUF77219.1| (Acyl-CoA synthetase family member 3 [Phytophthora nicotianae] >gi|970643095|gb|KUF84497.1| Acyl-CoA synthetase family member 3 [Phytophthora nicotianae])

HSP 1 Score: 355.91 bits (912), Expect = 9.470e-113
Identity = 215/564 (38.12%), Postives = 312/564 (55.32%), Query Frame = 0
Query:   10 QIFRQLVDHGPKIATTSS-KGGFNLTYSEILQESALIAARLGRTVISSPSTSPSTFRPIALLAPQDHTFCLGFMGVLQAGGAVVPIYSRSPQREIEFILQDSGCAQVLLHPEFRSNLTPLLRGSKGL----DIEVV---DLIPGTDQSDLEKIAAMRMGKDKAAMLGHQYSEIVEWIESSE--NADAVVVYTSGTTGRPKGVVKTHAQLAEMCKGVVKAWNYAPTDRVLEFLPLHHLHGLLNKCLAVLWAGGVVEFLGSANANAIWDRL---ADPTKPMLSMFHAVPTIYALMLEELESGRMDEASQKRALQHLRQMRLIVSGSAALPQCRFLKWEALTGHRILERYGTTEAGMILSNPLTPVSSRFPGHVGAPFPGVDVRLVDPETEADVTREPGKQGEVRVRSEHGLFSRYHNRSEVTRKAFDEDNWYKTGDLGKYDPE-KGFKIVGRLSADILNSGGYKISALEIEAAIQEHEQVAEVVVLGRCHSKWGDEVVAVVRIKETAMRSANVSGNPLEKRTGLLTTEGLHDFLASRLASHMLPRTMYIVNLIPKNAMGKVDKRVL 559
             IF +L++H   +A  S+       TY+ +L+ +  +   L +  +S     P     +ALL  +  ++ +   G+  AGG  VP++   P  E+++I+ DSG   ++++  F +  + L     GL    ++EV+   D + G D  +L                  Q  ++  W+ S++   A A ++YTSGTTGRPKGVV THA L      +V AW     D ++ FLPLHH+HG+LN  L V++AGG VEFL  A  + IW +L   A  T+P +SM  AVPT+Y  +LE+LE    D+   + AL+  R +R+ +SGS A P     +WE+LTG R+LERYG TE GM+L+NPL     R  G+VG PFP V VR+VDP+TE ++     K+GE+RV+    +F  Y  + E T K FD D W+KTGD+ +Y  E K F+I GR SADIL + GYK+SAL++E  +  H QV E  V G     WG  V AV+R        +NV  + +   T    +  L +F    LAS+ +PR  + V  IPKNAMGKV+K+ L
Sbjct:   15 HIFEKLLEHQSSVAVVSTGDESLEWTYAALLRRAFELRDAL-QEKLSKDEEQPR----VALLGARGASYLVIQWGIWLAGGIAVPLHPAHPADEMDYIVSDSGATLLVVNESFMTPDSKLKEYVTGLPARLNVEVLVRPDDVKGGDDKELS---------------SEQIKQVQNWLNSTDYSKAGAYMIYTSGTTGRPKGVVTTHAALTAQISDLVTAWEMTSNDHLIHFLPLHHVHGILNNMLCVMYAGGSVEFLPFAKPSLIWSKLGEAASTTRP-VSMLMAVPTVYMKLLEDLEKQPQDDPKVQNALKGARGLRVAISGSMACPVSILNRWESLTGLRLLERYGMTELGMVLTNPLH--GDRHLGYVGNPFPSVSVRVVDPDTETEIPLSEEKEGELRVKGP-SVFREYWRKPEATAKEFDADGWFKTGDIVQYSNELKSFRIRGRASADILKTAGYKVSALDVERVLLTHTQVLECAVFGLPDETWGQIVAAVIR--------SNVKADKIVPET---FSPPLVEFAKEHLASYRVPRKYFFVEEIPKNAMGKVNKKAL 543          
BLAST of EWM25800.1 vs. NCBI_GenBank
Match: gi|566024710|gb|ETI47621.1| (hypothetical protein F443_08213 [Phytophthora parasitica P1569] >gi|567962017|gb|ETK87549.1| hypothetical protein L915_08040 [Phytophthora parasitica] >gi|570952163|gb|ETP17420.1| hypothetical protein F441_08189 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 355.91 bits (912), Expect = 2.800e-112
Identity = 215/564 (38.12%), Postives = 311/564 (55.14%), Query Frame = 0
Query:   10 QIFRQLVDHGPKIATTSS-KGGFNLTYSEILQESALIAARLGRTVISSPSTSPSTFRPIALLAPQDHTFCLGFMGVLQAGGAVVPIYSRSPQREIEFILQDSGCAQVLLHPEFRSNLTPLLRGSKGL----DIEVV---DLIPGTDQSDLEKIAAMRMGKDKAAMLGHQYSEIVEWIESSE--NADAVVVYTSGTTGRPKGVVKTHAQLAEMCKGVVKAWNYAPTDRVLEFLPLHHLHGLLNKCLAVLWAGGVVEFLGSANANAIWDRL---ADPTKPMLSMFHAVPTIYALMLEELESGRMDEASQKRALQHLRQMRLIVSGSAALPQCRFLKWEALTGHRILERYGTTEAGMILSNPLTPVSSRFPGHVGAPFPGVDVRLVDPETEADVTREPGKQGEVRVRSEHGLFSRYHNRSEVTRKAFDEDNWYKTGDLGKYDPE-KGFKIVGRLSADILNSGGYKISALEIEAAIQEHEQVAEVVVLGRCHSKWGDEVVAVVRIKETAMRSANVSGNPLEKRTGLLTTEGLHDFLASRLASHMLPRTMYIVNLIPKNAMGKVDKRVL 559
             IF +L++H   +A  S+       TY+ +L+ +  +   L    +S     P     +ALL  +  ++ +   G+  AGG  VP++   P  E+++I+ DSG   ++++  F +  + L     GL    ++EV+   D + G D  +L                  Q  ++  W+ S++   A A ++YTSGTTGRPKGVV THA L      +V AW     D ++ FLPLHH+HG+LN  L V++AGG VEFL  A  + IW +L   A  T+P +SM  AVPT+Y  +LE+LE    D+   + AL+  R +R+ +SGS A P     +WE+LTG R+LERYG TE GM+L+NPL     R  G+VG PFP V VR+VDP+TE ++     K+GE+RV+    +F  Y  + E T K FD D W+KTGD+ +Y  E K F+I GR SADIL + GYK+SAL++E  +  H QV E  V G     WG  V AV+R        +NV  + +   T    +  L +F    LAS+ +PR  + V  IPKNAMGKV+K+ L
Sbjct:   58 HIFEKLLEHQSSVAVVSTGDESLEWTYAALLRRAFELRDALQEK-LSKDEEQPR----VALLGARGASYLVIQWGIWLAGGIAVPLHPAHPADEMDYIVSDSGATLLVVNESFMTPDSKLKEYVTGLPARLNVEVLVRPDDVKGGDDKELS---------------SEQIKQVQNWLNSTDYSKAGAYMIYTSGTTGRPKGVVTTHAALTAQISDLVTAWEMTSNDHLIHFLPLHHVHGILNNMLCVMYAGGSVEFLPFAKPSLIWSKLGEAASTTRP-VSMLMAVPTVYMKLLEDLEKQPQDDPKVQNALKGARGLRVAISGSMACPVSILNRWESLTGLRLLERYGMTELGMVLTNPLH--GDRHLGYVGNPFPSVSVRVVDPDTETEIPLSEEKEGELRVKGP-SVFREYWRKPEATAKEFDADGWFKTGDIVQYSNELKSFRIRGRASADILKTAGYKVSALDVERVLLTHTQVLECAVFGLPDETWGQIVAAVIR--------SNVKADKIVPET---FSPPLVEFAKEHLASYRVPRKYFFVEEIPKNAMGKVNKKAL 586          
BLAST of EWM25800.1 vs. NCBI_GenBank
Match: gi|570986414|gb|ETP45430.1| (hypothetical protein F442_08153 [Phytophthora parasitica P10297])

HSP 1 Score: 355.91 bits (912), Expect = 2.831e-112
Identity = 215/564 (38.12%), Postives = 312/564 (55.32%), Query Frame = 0
Query:   10 QIFRQLVDHGPKIATTSS-KGGFNLTYSEILQESALIAARLGRTVISSPSTSPSTFRPIALLAPQDHTFCLGFMGVLQAGGAVVPIYSRSPQREIEFILQDSGCAQVLLHPEFRSNLTPLLRGSKGL----DIEVV---DLIPGTDQSDLEKIAAMRMGKDKAAMLGHQYSEIVEWIESSE--NADAVVVYTSGTTGRPKGVVKTHAQLAEMCKGVVKAWNYAPTDRVLEFLPLHHLHGLLNKCLAVLWAGGVVEFLGSANANAIWDRL---ADPTKPMLSMFHAVPTIYALMLEELESGRMDEASQKRALQHLRQMRLIVSGSAALPQCRFLKWEALTGHRILERYGTTEAGMILSNPLTPVSSRFPGHVGAPFPGVDVRLVDPETEADVTREPGKQGEVRVRSEHGLFSRYHNRSEVTRKAFDEDNWYKTGDLGKYDPE-KGFKIVGRLSADILNSGGYKISALEIEAAIQEHEQVAEVVVLGRCHSKWGDEVVAVVRIKETAMRSANVSGNPLEKRTGLLTTEGLHDFLASRLASHMLPRTMYIVNLIPKNAMGKVDKRVL 559
             IF +L++H   +A  S+       TY+ +L+ +  +   L +  +S     P     +ALL  +  ++ +   G+  AGG  VP++   P  E+++I+ DSG   ++++  F +  + L     GL    ++EV+   D + G D  +L                  Q  ++  W+ S++   A A ++YTSGTTGRPKGVV THA L      +V AW     D ++ FLPLHH+HG+LN  L V++AGG VEFL  A  + IW +L   A  T+P +SM  AVPT+Y  +LE+LE    D+   + AL+  R +R+ +SGS A P     +WE+LTG R+LERYG TE GM+L+NPL     R  G+VG PFP V VR+VDP+TE ++     K+GE+RV+    +F  Y  + E T K FD D W+KTGD+ +Y  E K F+I GR SADIL + GYK+SAL++E  +  H QV E  V G     WG  V AV+R        +NV  + +   T    +  L +F    LAS+ +PR  + V  IPKNAMGKV+K+ L
Sbjct:   58 HIFEKLLEHQSSVAVVSTGDESLEWTYAALLRRAFELRDAL-QEKLSKDEEQPR----VALLGARGASYLVIQWGIWLAGGIAVPLHPAHPADEMDYIVSDSGATLLVVNESFMTPDSKLKEYVTGLPARLNVEVLVRPDDVKGGDDKELS---------------SEQIKQVQNWLNSTDYSKAGAYMIYTSGTTGRPKGVVTTHAALTAQISDLVTAWEMTSNDHLIHFLPLHHVHGILNNMLCVMYAGGSVEFLPFAKPSLIWSKLGEAASTTRP-VSMLMAVPTVYMKLLEDLEKQPQDDPKVQNALKGARGLRVAISGSMACPVSILNRWESLTGLRLLERYGMTELGMVLTNPLH--GDRHLGYVGNPFPSVSVRVVDPDTETEIPLSEEKEGELRVKGP-SVFREYWRKPEATAKEFDADGWFKTGDIVQYSNELKSFRIRGRASADILKTAGYKVSALDVERVLLTHTQVLECAVFGLPDETWGQIVAAVIR--------SNVKADKIVPET---FSPPLVEFAKEHLASYRVPRKYFFVEEIPKNAMGKVNKKAL 586          
BLAST of EWM25800.1 vs. NCBI_GenBank
Match: gi|675192179|ref|XP_008904974.1| (hypothetical protein PPTG_11413 [Phytophthora parasitica INRA-310] >gi|568050417|gb|ETM47359.1| hypothetical protein L914_07926 [Phytophthora parasitica] >gi|568095058|gb|ETN09828.1| hypothetical protein PPTG_11413 [Phytophthora parasitica INRA-310] >gi|570328371|gb|ETO76319.1| hypothetical protein F444_08269 [Phytophthora parasitica P1976])

HSP 1 Score: 355.91 bits (912), Expect = 3.325e-112
Identity = 215/564 (38.12%), Postives = 311/564 (55.14%), Query Frame = 0
Query:   10 QIFRQLVDHGPKIATTSS-KGGFNLTYSEILQESALIAARLGRTVISSPSTSPSTFRPIALLAPQDHTFCLGFMGVLQAGGAVVPIYSRSPQREIEFILQDSGCAQVLLHPEFRSNLTPLLRGSKGL----DIEVV---DLIPGTDQSDLEKIAAMRMGKDKAAMLGHQYSEIVEWIESSE--NADAVVVYTSGTTGRPKGVVKTHAQLAEMCKGVVKAWNYAPTDRVLEFLPLHHLHGLLNKCLAVLWAGGVVEFLGSANANAIWDRL---ADPTKPMLSMFHAVPTIYALMLEELESGRMDEASQKRALQHLRQMRLIVSGSAALPQCRFLKWEALTGHRILERYGTTEAGMILSNPLTPVSSRFPGHVGAPFPGVDVRLVDPETEADVTREPGKQGEVRVRSEHGLFSRYHNRSEVTRKAFDEDNWYKTGDLGKYDPE-KGFKIVGRLSADILNSGGYKISALEIEAAIQEHEQVAEVVVLGRCHSKWGDEVVAVVRIKETAMRSANVSGNPLEKRTGLLTTEGLHDFLASRLASHMLPRTMYIVNLIPKNAMGKVDKRVL 559
             IF +L++H   +A  S+       TY+ +L+ +  +   L    +S     P     +ALL  +  ++ +   G+  AGG  VP++   P  E+++I+ DSG   ++++  F +  + L     GL    ++EV+   D + G D  +L                  Q  ++  W+ S++   A A ++YTSGTTGRPKGVV THA L      +V AW     D ++ FLPLHH+HG+LN  L V++AGG VEFL  A  + IW +L   A  T+P +SM  AVPT+Y  +LE+LE    D+   + AL+  R +R+ +SGS A P     +WE+LTG R+LERYG TE GM+L+NPL     R  G+VG PFP V VR+VDP+TE ++     K+GE+RV+    +F  Y  + E T K FD D W+KTGD+ +Y  E K F+I GR SADIL + GYK+SAL++E  +  H QV E  V G     WG  V AV+R        +NV  + +   T    +  L +F    LAS+ +PR  + V  IPKNAMGKV+K+ L
Sbjct:   58 HIFEKLLEHQSSVAVVSTGDESLEWTYAALLRRAFELRDALQEK-LSKDEEQPR----VALLGARGASYLVIQWGIWLAGGIAVPLHPAHPADEMDYIVSDSGATLLVVNESFMTPDSKLKEYVTGLPARLNVEVLVRPDDVKGGDDKELS---------------SEQIKQVQNWLNSTDYSKAGAYMIYTSGTTGRPKGVVTTHAALTAQISDLVTAWEMTSNDHLIHFLPLHHVHGILNNMLCVMYAGGSVEFLPFAKPSLIWSKLGEAASTTRP-VSMLMAVPTVYMKLLEDLEKQPQDDPKVQNALKGARGLRVAISGSMACPVSILNRWESLTGLRLLERYGMTELGMVLTNPLH--GDRHLGYVGNPFPSVSVRVVDPDTETEIPLSEEKEGELRVKGP-SVFREYWRKPEATAKEFDADGWFKTGDIVQYSNELKSFRIRGRASADILKTAGYKVSALDVERVLLTHTQVLECAVFGLPDETWGQIVAAVIR--------SNVKADKIVPET---FSPPLVEFAKEHLASYRVPRKYFFVEEIPKNAMGKVNKKAL 586          
BLAST of EWM25800.1 vs. NCBI_GenBank
Match: gi|567990756|gb|ETL40978.1| (hypothetical protein L916_07963 [Phytophthora parasitica])

HSP 1 Score: 355.14 bits (910), Expect = 5.505e-112
Identity = 215/564 (38.12%), Postives = 311/564 (55.14%), Query Frame = 0
Query:   10 QIFRQLVDHGPKIATTSS-KGGFNLTYSEILQESALIAARLGRTVISSPSTSPSTFRPIALLAPQDHTFCLGFMGVLQAGGAVVPIYSRSPQREIEFILQDSGCAQVLLHPEFRSNLTPLLRGSKGL----DIEVV---DLIPGTDQSDLEKIAAMRMGKDKAAMLGHQYSEIVEWIESSE--NADAVVVYTSGTTGRPKGVVKTHAQLAEMCKGVVKAWNYAPTDRVLEFLPLHHLHGLLNKCLAVLWAGGVVEFLGSANANAIWDRL---ADPTKPMLSMFHAVPTIYALMLEELESGRMDEASQKRALQHLRQMRLIVSGSAALPQCRFLKWEALTGHRILERYGTTEAGMILSNPLTPVSSRFPGHVGAPFPGVDVRLVDPETEADVTREPGKQGEVRVRSEHGLFSRYHNRSEVTRKAFDEDNWYKTGDLGKYDPE-KGFKIVGRLSADILNSGGYKISALEIEAAIQEHEQVAEVVVLGRCHSKWGDEVVAVVRIKETAMRSANVSGNPLEKRTGLLTTEGLHDFLASRLASHMLPRTMYIVNLIPKNAMGKVDKRVL 559
             IF +L++H   +A  S+       TY+ +L+ +  +   L +  +S     P     +ALL  +  ++ +   G+  AGG  VP++   P  E+ +I+ DSG   ++++  F +  + L     GL    ++EV+   D + G D  +L                  Q  ++  W+ S++   A A ++YTSGTTGRPKGVV THA L      +V AW     D ++ FLPLHH+HG+LN  L V++AGG VEFL  A  + IW +L   A  T+P +SM  AVPT+Y  +LE+LE    D+   + AL+  R +R+ +SGS A P     +WE+LTG R+LERYG TE GM+L+NPL     R  G+VG PFP V VR+VDP+TE ++     K+GE+RV+    +F  Y  + E T K FD D W+KTGD+ +Y  E K F+I GR SADIL + GYK+SAL++E  +  H QV E  V G     WG  V AV+R        +NV  + +   T    +  L +F    LAS+ +PR  + V  IPKNAMGKV+K+ L
Sbjct:   58 HIFEKLLEHQSSVAVVSTGDESLEWTYAALLRRAFELRDAL-QEKLSKDEEQPR----VALLGARGASYLVIQWGIWLAGGIAVPLHPAHPADEMNYIVSDSGATLLVVNESFMTPDSKLKEYVTGLPARLNVEVLVRPDDVKGGDDKELS---------------SEQIKQVQNWLNSTDYSKAGAYMIYTSGTTGRPKGVVTTHAALTAQISDLVTAWEMTSNDHLIHFLPLHHVHGILNNMLCVMYAGGSVEFLPFAKPSLIWSKLGEAASTTRP-VSMLMAVPTVYMKLLEDLEKQPQDDPKVQNALKGARGLRVAISGSMACPVSILNRWESLTGLRLLERYGMTELGMVLTNPLH--GDRHLGYVGNPFPSVSVRVVDPDTETEIPLSEEKEGELRVKGP-SVFREYWRKPEATAKEFDADGWFKTGDIVQYSNELKSFRIRGRASADILKTAGYKVSALDVERVLLTHTQVLECAVFGLPDETWGQIVAAVIR--------SNVKADKIVPET---FSPPLVEFAKEHLASYRVPRKYFFVEEIPKNAMGKVNKKAL 586          
BLAST of EWM25800.1 vs. NCBI_GenBank
Match: gi|301098689|ref|XP_002898437.1| (acyl-CoA synthetase, putative [Phytophthora infestans T30-4] >gi|262105208|gb|EEY63260.1| acyl-CoA synthetase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 352.829 bits (904), Expect = 1.216e-111
Identity = 210/557 (37.70%), Postives = 310/557 (55.66%), Query Frame = 0
Query:   10 QIFRQLVDHGPKIATTSS-KGGFNLTYSEILQESALIAARLGRTVISSPSTSPSTFRPIALLAPQDHTFCLGFMGVLQAGGAVVPIYSRSPQREIEFILQDSGCAQVLLHPEFRSNLTPLLRGSKGLDIEV-VDLIPGTDQSDLEKIAAMRMGKDKAAMLGHQYSEIVEWIESSE--NADAVVVYTSGTTGRPKGVVKTHAQLAEMCKGVVKAWNYAPTDRVLEFLPLHHLHGLLNKCLAVLWAGGVVEFLGSANANAIWDRL--ADPTKPMLSMFHAVPTIYALMLEELESGRMDEASQKRALQHLRQMRLIVSGSAALPQCRFLKWEALTGHRILERYGTTEAGMILSNPLTPVSSRFPGHVGAPFPGVDVRLVDPETEADVTREPGKQGEVRVRSEHGLFSRYHNRSEVTRKAFDEDNWYKTGDLGKYDPE-KGFKIVGRLSADILNSGGYKISALEIEAAIQEHEQVAEVVVLGRCHSKWGDEVVAVVRIKETAMRSANVSGNPLEKRTGLLTTEGLHDFLASRLASHMLPRTMYIVNLIPKNAMGKVDKRVL 559
             IF +L ++   +A  S+       TY+ +L+ +  +     R V+     +      +ALL  +  ++ +    +  AGG  VP++   P  E+++I  DSG   ++++  F +  + L     GL   + V++I   D            G D  A+   Q  ++++W++S++   A A ++YTSGTTGRPKGVV THA L      +V AW    +D ++ FLPLHH+HG+LN  L V++AGG VE L  A  + IW +L  A   +  +SM  AVPT+Y  +LE+LE    D+   + AL+  R +R+ +SGS A P     +WE+LTG R+LERYG TE GM+L+NPL     R  G+VG PFP V VR+VDP+TE ++     K+GE+RV+    +F  Y  + E T K FD D W+KTGD+ +Y  E K F+I GR SADIL + GYK+SAL++E  +  H QV E  V G     WG  V AV+R        ++V G+ +  +   + T  L DF    LAS+ +PR  + V  IPKNAMGKV+K+ L
Sbjct:   15 HIFERLPEYQSSVAVVSTGDEALEWTYAALLRRAFTL-----REVLQEKLPTDEEQPRVALLGARGASYLIIQWAIWLAGGIAVPLHPAHPADEMDYIAADSGATLLVVNESFMTPNSKLKEYVDGLPARLNVEVIVRPDNVK---------GGDDKALSNEQEKQVLQWLDSTDYSTAGAYMIYTSGTTGRPKGVVTTHAALTAQISDLVTAWEMNSSDHLIHFLPLHHVHGILNNMLCVMYAGGSVELLPFAKPSLIWSKLGQAAAARRPVSMLMAVPTVYMKLLEDLEKQPQDDPKVQSALKGARDLRVAISGSMACPVSILNRWESLTGLRLLERYGMTELGMVLTNPLH--GERHLGYVGNPFPSVSVRVVDPDTETELALSDEKEGELRVKGP-SVFREYWRKPEATAKEFDADGWFKTGDIVQYSNELKSFRIRGRASADILKTAGYKVSALDVERVLLTHPQVLECAVFGLPDETWGQIVAAVIR--------SDVKGDKVFPK---MFTPPLVDFSKEHLASYRVPRKYFFVEEIPKNAMGKVNKKAL 543          
BLAST of EWM25800.1 vs. NCBI_GenBank
Match: gi|568019976|gb|ETL94115.1| (hypothetical protein L917_07865 [Phytophthora parasitica])

HSP 1 Score: 353.984 bits (907), Expect = 1.626e-111
Identity = 214/564 (37.94%), Postives = 310/564 (54.96%), Query Frame = 0
Query:   10 QIFRQLVDHGPKIATTSS-KGGFNLTYSEILQESALIAARLGRTVISSPSTSPSTFRPIALLAPQDHTFCLGFMGVLQAGGAVVPIYSRSPQREIEFILQDSGCAQVLLHPEFRSNLTPLLRGSKGL----DIEVV---DLIPGTDQSDLEKIAAMRMGKDKAAMLGHQYSEIVEWIESSE--NADAVVVYTSGTTGRPKGVVKTHAQLAEMCKGVVKAWNYAPTDRVLEFLPLHHLHGLLNKCLAVLWAGGVVEFLGSANANAIWDRL---ADPTKPMLSMFHAVPTIYALMLEELESGRMDEASQKRALQHLRQMRLIVSGSAALPQCRFLKWEALTGHRILERYGTTEAGMILSNPLTPVSSRFPGHVGAPFPGVDVRLVDPETEADVTREPGKQGEVRVRSEHGLFSRYHNRSEVTRKAFDEDNWYKTGDLGKYDPE-KGFKIVGRLSADILNSGGYKISALEIEAAIQEHEQVAEVVVLGRCHSKWGDEVVAVVRIKETAMRSANVSGNPLEKRTGLLTTEGLHDFLASRLASHMLPRTMYIVNLIPKNAMGKVDKRVL 559
             IF +L++H   +A  S+       TY+ +L+ +  +   L    +S     P     +ALL  +  ++ +   G+  AGG  VP++   P  E+++I+ DSG   ++++  F +  + L     GL    ++EV+   D + G D  +L                  Q  ++  W+ S++   A A ++YTSGTTGRPKGVV THA L      +V AW     D ++ FLPLHH+HG+LN  L V++AGG VEFL  A  + IW +L   A  T+P +SM  AVPT+Y  +LE+LE    D+   + AL+  R +R+ +SGS A P     +WE+LTG R+LERYG TE GM+L+NPL     R  G+VG PFP V VR+VDP+TE ++     K+GE+RV+    +F  Y  + E T K FD D W+KTGD+ +Y  E K F+I GR SADIL + GYK+SAL++E  +  H QV E  V G     WG  V AV+R        +NV  + +   T    +  L +F    L S+ +PR  + V  IPKNAMGKV+K+ L
Sbjct:   58 HIFEKLLEHQSSVAVVSTGDESLEWTYAALLRRAFELRDALQEK-LSKDEEQPR----VALLGARGASYLVIQWGIWLAGGIAVPLHPAHPADEMDYIVSDSGATLLVVNESFMTPDSKLKEYVTGLPARLNVEVLVRPDDVKGGDDKELS---------------SEQIKQVQNWLNSTDYSKAGAYMIYTSGTTGRPKGVVTTHAALTAQISDLVTAWEMTSNDHLIHFLPLHHVHGILNNMLCVMYAGGSVEFLPFAKPSLIWSKLGEAASTTRP-VSMLMAVPTVYMKLLEDLEKQPQDDPKVQNALKGARGLRVAISGSMACPVSILNRWESLTGLRLLERYGMTELGMVLTNPLH--GDRHLGYVGNPFPSVSVRVVDPDTETEIPLSEEKEGELRVKGP-SVFREYWRKPEATAKEFDADGWFKTGDIVQYSNELKSFRIRGRASADILKTAGYKVSALDVERVLLTHTQVLECAVFGLPDETWGQIVAAVIR--------SNVKADKIVPET---FSPPLVEFAKEHLVSYRVPRKYFFVEEIPKNAMGKVNKKAL 586          
BLAST of EWM25800.1 vs. NCBI_GenBank
Match: gi|1214673752|gb|OWY96393.1| (Acyl-CoA synthetase [Phytophthora megakarya])

HSP 1 Score: 352.058 bits (902), Expect = 2.145e-111
Identity = 213/571 (37.30%), Postives = 319/571 (55.87%), Query Frame = 0
Query:    1 MKQLPLPSLQIFRQLVDHGPKIATTSSKGGFNLTYSEILQESALIAARLGRTVISSPSTSPSTFRPIALLAPQDHTFCLGFMGVLQAGGAVVPIYSRSPQREIEFILQDSGCAQVLLHPEFRSNLTPLLRGSKGL-DIEVVDLIPGTDQSDLEKIAAMRMGKDKAAMLGHQYSEIVEWIESS--ENADAVVVYTSGTTGRPKGVVKTHAQLAEMCKGVVKAWNYAPTDRVLEFLPLHHLHGLLNKCLAVLWAGGVVEFLGSANANAIWDRL--ADPTKPMLSMFHAVPTIYALMLEELESGRMDEASQKRALQHLRQMRLIVSGSAALPQCRFLKWEALTGHRILERYGTTEAGMILSNPLTPVSSRFPGHVGAPFPGVDVRLVDPETEADVTREPGKQGEVRVRSEHGLFSRYHNRSEVTRKAFDEDNWYKTGDLGKYDPE-KGFKIVGRLSADILNSGGYKISALEIEAAIQEHEQVAEVVVLGRCHSKWGDEVVAVVRIKETAMRSANVSGNPLEKRTGLLTTEGLHDFLASRLASHMLPRTMYIVNLIPKNAMGKVDKRVLLEQLGK 565
            M Q  L +  +F +L+DH   +A  S++     TY+ +L+ +  +   L +  +      P     +ALL  +  ++ +    +   GG  VP++   P  E+ +I+ DSG A ++++  F ++   L     GL ++EVV         D+E       G DK  +    ++++ +W+++     A A +VYTSGTTGRPKGVV THA L      +V AW  + +D ++ FLPLHH+HG+LN  L V++AGG VEFL  A  + IW +L  A  +K  ++M  AVPT+Y  +LE++E    D+   + AL   R++R+ +SGS A P     +WE LTG R+LERYG TE GM+L+NPL     R  G+VG PFP V VR+VDP+TE ++     K+GE+RV+    +F  Y  + E T K FD D W+KTGD+ +Y  E K F+I GR SADIL + GYK+SAL++E  +  H QV E  V G     WG  V AV+R        ++V  + ++  +       L +F    LAS+ +PR  + V  IPKNAMGKV+K+ L +  G+
Sbjct:    1 MTQSDLIAPHLFEKLLDHPSSVALVSTEESLEWTYAALLRRAFTLRDELLQK-LPKDEEQPR----VALLGARGASYLVIQWAIWLVGGIAVPLHPAHPAEEMNYIVSDSGAALLVVNESFLTSDAKLKEYVTGLVNVEVV-----VRPDDVEG------GHDKE-LSSELHNQVQDWLKTRVYSKAGAYMVYTSGTTGRPKGVVTTHAALTAQISDLVTAWEMSSSDHLVHFLPLHHVHGILNNLLCVMYAGGSVEFLPFAKPSLIWSKLGQAANSKRPVTMLMAVPTVYMKLLEDIEKQSHDDPKVQSALTGARRLRVAISGSMACPVSILNRWENLTGLRLLERYGMTELGMVLTNPLH--GDRHLGYVGNPFPSVSVRVVDPDTETELPLSDEKEGELRVKGP-SVFREYWKKPEATAKEFDADGWFKTGDIVQYSNELKSFRIRGRASADILKTAGYKVSALDVERVLLTHPQVLECAVFGLPDETWGQIVAAVIR--------SDVKSDKIDPES---FAPPLVEFSKEHLASYRVPRKYFFVEEIPKNAMGKVNKKALAKIYGE 540          
BLAST of EWM25800.1 vs. NCBI_GenBank
Match: gi|695385402|ref|XP_009518265.1| (hypothetical protein PHYSODRAFT_555724 [Phytophthora sojae] >gi|348683162|gb|EGZ22977.1| hypothetical protein PHYSODRAFT_555724 [Phytophthora sojae])

HSP 1 Score: 350.132 bits (897), Expect = 1.371e-110
Identity = 211/567 (37.21%), Postives = 320/567 (56.44%), Query Frame = 0
Query:   10 QIFRQLVDHGPKIATTSSKGGFNL--TYSEILQESALIAARLGRTVISSPSTSPSTFRP-IALLAPQDHTFCLGFMGVLQAGGAVVPIYSRSPQREIEFILQDSGCAQVLLHPEFR---SNLTPLLRG-SKGLDIEVV---DLIPGTDQSDLEKIAAMRMGKDKAAMLGHQYSEIVEWIESSE--NADAVVVYTSGTTGRPKGVVKTHAQLAEMCKGVVKAWNYAPTDRVLEFLPLHHLHGLLNKCLAVLWAGGVVEFLGSANANAIWDRLADP--TKPMLSMFHAVPTIYALMLEELESGRMDEASQKRALQHLRQMRLIVSGSAALPQCRFLKWEALTGHRILERYGTTEAGMILSNPLTPVSSRFPGHVGAPFPGVDVRLVDPETEADVTREPGKQGEVRVRSEHGLFSRYHNRSEVTRKAFDEDNWYKTGDLGKYDPE-KGFKIVGRLSADILNSGGYKISALEIEAAIQEHEQVAEVVVLGRCHSKWGDEVVAVVRIKETAMRSANVSGNPLEKRTGLLTTEGLHDFLASRLASHMLPRTMYIVNLIPKNAMGKVDKRVLLE 561
             I  +L++H   +A  ++ G  +L  TY+ +L+ +  +   L   +       P+  +P +A+L  +  ++ +    +  AGG  VP++   P  E+++I+ DSG + ++ +  F    S L   + G    L++EVV   D + G D+ ++                  Q  E+ +W+E+ +   A A ++YTSGTTGRPKGVV THA L      +V AW  + +D ++ FLPLHH+HG+LN  L V++ GG VEFL  A  + IW +L +   TK  +SM  AVPT+Y  +LE++E    D++  + AL   R +R+ +SGS A P     +WE+LTG R+LERYG TE GM+L+NPL     R  G+VG  FP V VR+VDP+TE ++  +  K+GE+RV+    +F  Y N+ E T K FD + W+KTGD+ +Y  E K F+I GR SADIL + GYK+SAL++E  +  H QV E  V G     WG  V AV+R         +V+GN +   +    +  L +F    LAS+ +PR  + V  IPKNAMGKV+K+ L++
Sbjct:   15 HIIEKLLEHQSSVALVTTGGEEDLQWTYATLLRRAFALRDELLDKL-------PNEGQPRVAMLGARGASYLIIQWAIWLAGGIAVPLHPAHPADEMDYIVSDSGASLLVANASFTELGSKLEEYVAGLPSRLNVEVVVRPDDVKGGDEKEIS---------------SEQQKEVQKWLETQDYAKAGAYMIYTSGTTGRPKGVVTTHAALTAQISDLVTAWEMSSSDHLIHFLPLHHVHGILNNLLCVMYVGGSVEFLPFAKPSLIWSKLGEAANTKRPVSMLMAVPTVYMKLLEDIEKQPQDDSKVQSALAGARGLRVAISGSMACPVSILNRWESLTGLRLLERYGMTELGMVLTNPLH--GDRHLGYVGNTFPSVSVRVVDPDTETELPLQEEKEGELRVKGP-SVFREYWNKPEATAKEFDAEGWFKTGDIVQYSNELKSFRIRGRASADILKTAGYKVSALDVERVLLTHPQVLECAVFGLPDETWGQIVAAVIR--------PDVAGNKVGPES---FSPHLVEFSKEHLASYRVPRKYFFVEKIPKNAMGKVNKKALVK 545          
The following BLAST results are available for this feature:
BLAST of EWM25800.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107667|gb|EWM25800.1|0.000e+0100.00acyl- synthetase family member mitochondrial [Nann... [more]
gi|970630206|gb|KUF77219.1|9.470e-11338.12Acyl-CoA synthetase family member 3 [Phytophthora ... [more]
gi|566024710|gb|ETI47621.1|2.800e-11238.12hypothetical protein F443_08213 [Phytophthora para... [more]
gi|570986414|gb|ETP45430.1|2.831e-11238.12hypothetical protein F442_08153 [Phytophthora para... [more]
gi|675192179|ref|XP_008904974.1|3.325e-11238.12hypothetical protein PPTG_11413 [Phytophthora para... [more]
gi|567990756|gb|ETL40978.1|5.505e-11238.12hypothetical protein L916_07963 [Phytophthora para... [more]
gi|301098689|ref|XP_002898437.1|1.216e-11137.70acyl-CoA synthetase, putative [Phytophthora infest... [more]
gi|568019976|gb|ETL94115.1|1.626e-11137.94hypothetical protein L917_07865 [Phytophthora para... [more]
gi|1214673752|gb|OWY96393.1|2.145e-11137.30Acyl-CoA synthetase [Phytophthora megakarya][more]
gi|695385402|ref|XP_009518265.1|1.371e-11037.21hypothetical protein PHYSODRAFT_555724 [Phytophtho... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4867rna4867Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications