EWM25833.1, cds4848 (CDS) Nannochloropsis gaditana

Overview
NameEWM25833.1
Unique Namecds4848
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:526079..528301 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25833.1
Productatp-binding cassette superfamily
Orig transcript idgnl|cribi|Naga_100021g33.8776.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:526079..528301 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR017871ABC_transporter_CS
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase
IPR003593AAA+_ATPase
Homology
BLAST of EWM25833.1 vs. NCBI_GenBank
Match: gi|585107700|gb|EWM25833.1| (atp-binding cassette superfamily [Nannochloropsis gaditana])

HSP 1 Score: 1513.05 bits (3916), Expect = 0.000e+0
Identity = 740/740 (100.00%), Postives = 740/740 (100.00%), Query Frame = 0
Query:    1 MVNRIHRLALLLSLAATTSVHAFMRVSCDPEQAWRISHISLADSKASTQTRAVTTNVPTPNYGDTQGAELFLDGIAVAAGATQLVSGVNWKINKGERVGIVGGNGAGKSTVLSVIAGHNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEAEARVTRDPSDANLLSLERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLLGEPSLLLLDEPTNHLDSAAKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELYRCGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKATMASAANSRKKTLEKMAIIEAPLAAGKRPHLRFPPPPKVMPELVKLQNASFGYPPAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQDLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEYRGTLVVISHNKAFVERLKVTHVGLIKNRRLVVEERMLRPSDWSFDAQGGSDARASPVVSTRAKGEESSTKSSRSTTSGREKNDGIPEKPKITYQEQRARFKRISAAPKRIAKLQQIIEDKEKKAEEYGKKMYHAGCDVAKVMELNERKEALASEVESLYAEWDELEALLAETASAGGA 740
            MVNRIHRLALLLSLAATTSVHAFMRVSCDPEQAWRISHISLADSKASTQTRAVTTNVPTPNYGDTQGAELFLDGIAVAAGATQLVSGVNWKINKGERVGIVGGNGAGKSTVLSVIAGHNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEAEARVTRDPSDANLLSLERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLLGEPSLLLLDEPTNHLDSAAKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELYRCGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKATMASAANSRKKTLEKMAIIEAPLAAGKRPHLRFPPPPKVMPELVKLQNASFGYPPAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQDLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEYRGTLVVISHNKAFVERLKVTHVGLIKNRRLVVEERMLRPSDWSFDAQGGSDARASPVVSTRAKGEESSTKSSRSTTSGREKNDGIPEKPKITYQEQRARFKRISAAPKRIAKLQQIIEDKEKKAEEYGKKMYHAGCDVAKVMELNERKEALASEVESLYAEWDELEALLAETASAGGA
Sbjct:    1 MVNRIHRLALLLSLAATTSVHAFMRVSCDPEQAWRISHISLADSKASTQTRAVTTNVPTPNYGDTQGAELFLDGIAVAAGATQLVSGVNWKINKGERVGIVGGNGAGKSTVLSVIAGHNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEAEARVTRDPSDANLLSLERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLLGEPSLLLLDEPTNHLDSAAKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELYRCGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKATMASAANSRKKTLEKMAIIEAPLAAGKRPHLRFPPPPKVMPELVKLQNASFGYPPAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQDLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEYRGTLVVISHNKAFVERLKVTHVGLIKNRRLVVEERMLRPSDWSFDAQGGSDARASPVVSTRAKGEESSTKSSRSTTSGREKNDGIPEKPKITYQEQRARFKRISAAPKRIAKLQQIIEDKEKKAEEYGKKMYHAGCDVAKVMELNERKEALASEVESLYAEWDELEALLAETASAGGA 740          
BLAST of EWM25833.1 vs. NCBI_GenBank
Match: gi|298710208|emb|CBJ26283.1| (ABC transporter, ATP-binding protein [Ectocarpus siliculosus])

HSP 1 Score: 546.584 bits (1407), Expect = 0.000e+0
Identity = 313/670 (46.72%), Postives = 423/670 (63.13%), Query Frame = 0
Query:   52 AVTTNVPTPNYGDTQGAELFLDGIAVAAGATQLVSGVNWKINKGERVGIVGGNGAGKSTVLSVIAGHNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEAEARVTRDPSDANLLS-LERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLLGEPSLLLLDEPTNHLDSAAKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELYR-CGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKATMASAANSRKKTLEKMAIIEAPLAAGK---RPHLRFPPPPKVMPELVKLQNASFGYPPAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQDLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEYRGTLVVISHNKAFVERLKVTHVGLIKNRRLVVEERMLRPSDWSFDAQG----GSDARASPVVSTRAKGEESSTKSSRSTTSGREKNDGIPEKPKITYQEQRARFKRISAAPKRIAKLQQIIEDKEKKAEEYGKKMYHAGCDVAKVMELNERKEA 712
            AV   V  P +G T GA + L+   V+ G T+L+S V+  +  G+RVG+VG NGAGKST+L  IAG+   +EGS  V   A +GYL Q  VSGS+R + EEA S+M   + A  A+  AEA+V  DP +   L  L +AQA +   GG   +R V  IL GLGF   D  R C+ FSGGWQMRIALA+LLL EP LLLLDEPTNHLD+AAK WL  FLS Y GT++ VSH+E LL   + +TVAE+  Q +E+++ CG+ +FL +R+ER  AL++    + KE AR+Q F+DRFGA+AT ASAA SR K L+KM     PL  GK   R  +R P PP      ++L+ ASFG+  A P    V+  L +G  + +LGPNG GKST+LKAL G LP   G   ER  GEGL++GVFTQDLAQDLPQ+ IAL+ VL  VR+ D +VSD+QAR  LG+LGL G KA+R I  LSGGEKARVAL++F ++P+NLL+LDEPSNHLD  T+ +L +A+  ++GT+VV+SHNK FV RL  TH  +++   +   +R  R SDW  DA+G    G DA +   ++     E+ + K+ R+                     ++ R K+++ AP RI+K++ ++E+ + K      +MY  G D A V  + + K+A
Sbjct:    6 AVDDEVANPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQAHAAMERAEAKVIEDPMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAG---ERKEGEGLKIGVFTQDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPPRASDWEHDAEGQGWKGGDAESKKELTP---AEKKAQKALRAAA-------------------EKERKKKVN-APGRISKIEALVEELDSKISALTDEMYEEGIDAATVARIVKDKDA 649          
BLAST of EWM25833.1 vs. NCBI_GenBank
Match: gi|1210517730|dbj|GAX23426.1| (hypothetical protein FisN_15Lh147 [Fistulifera solaris])

HSP 1 Score: 456.447 bits (1173), Expect = 1.178e-147
Identity = 273/679 (40.21%), Postives = 410/679 (60.38%), Query Frame = 0
Query:   61 NYGDTQGAELFLDGIAVAAGATQLVSGVNWKINKGERVGIVGGNGAGKSTVLSVIAGHNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEAEARVTRDPSDANLLSLERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLLGEPSLLLLDEPTNHLDSAAKEWLMHFLSGYT-GTVLLVSHEEELLRAFQCTTVAELRFQALELYR-CGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKATMASAANSRKKTLEKM---AIIEAP----LAAGKRPHLRFPPPPK-VMPELVKLQNASFGYPPAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQDLAQDLPQEHIALDYVLSTVRQK--DLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEY---RGTLVVISHNKAFVERLKVTHVGLIKNRRLVVEERMLRPSDWSFDAQGGSDARASPVVSTRAKGEESSTKSSRSTTSGREKNDGIPEKPKITYQEQRARFKRISAAPKRIAKLQQIIEDKEKKAEEYGKKMYHAGCDVAKVMELNERKEALASEVESLYAEW 724
            N GD +GA L L+ ++V  G  ++++ ++W++    + G+VG NGAGKST+LS I G     +G + +    TLGYL QTAV+GS   + EEA S MT    AQ+ + +A         +A++ +LE A   +  AGG   E +V ++L GLGF  S+  + C + SGGWQMR+ALA+LLL EPS  L+DEP+NHLD+AA +WL  +L+ Y  G+++LV+H  +LLR+     +AE+  + L++Y+ C YDQ+LA + ERAEA   A  R  ++ A++Q+F+DRFGA AT ASAA SR K +E+M    +++AP    +    +P L  P PPK +   L+ L++A  G+   + L+  V+  +TRG ++++ GPNG GKST+L  L G+ P L G   ERI  + L +G+FTQDLAQ+L     A+D V    R +  ++ ++DQQAR  +G LGL GEK++R +  LSGGEKARVAL++FAL P N+ ++DE SNHLDV  +E L +AL ++    G L+V+SH++ F ++++ THV  +   +L +E+R  R SDW+ D     D  A+           +++KS        +K D  P   K  +            APKRIAKL+++IE+ E K      +M   G D  K+M+L+++KE L + VE    EW
Sbjct:   38 NKGDARGAALLLEDVSVFRGPNEILNKISWRVEPNTKWGLVGQNGAGKSTLLSAIVGQA-TFDGKVTIGHTQTLGYLRQTAVAGSQTTIYEEACSGMTDIMEAQRDMEKA-------MEEADMDALEEATTRFEAAGGYQQEAKVSSVLKGLGF--SNLEQRCDELSGGWQMRVALAKLLLSEPSFCLMDEPSNHLDAAALKWLARYLANYDKGSLILVTHNVQLLRSMD--HIAEVSSKKLQIYKSCTYDQYLALKAERAEAARNAYERNLEKAAKLQSFVDRFGASATKASAAQSRVKQIERMEREGLLDAPAEEIITERFKPSLNLPDPPKSIGHSLLTLKDAKVGHE-GRVLITGVNLEITRGMKLLIRGPNGAGKSTILHTLRGTCPLLGG---ERIENDSLRLGMFTQDLAQELDPTQRAVDIVTQYARGEGGNIMITDQQARTVMGGLGLIGEKSLRKLGDLSGGEKARVALAMFALKPSNVYLMDEVSNHLDVECVEALGDALRDWGEETGALLVVSHDREFCDKIEFTHVATVAGGKLFIEQRGARDSDWAID-----DMEAA-----------ATSKSIYQEVKETKKPDLDPALRKQAFN-----------APKRIAKLEKMIEETEGKIAAVEAEMIQNGSDTGKLMDLSKQKEGLEASVEKYTREW 673          
BLAST of EWM25833.1 vs. NCBI_GenBank
Match: gi|223997230|ref|XP_002288288.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220975396|gb|EED93724.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 450.669 bits (1158), Expect = 5.725e-147
Identity = 253/562 (45.02%), Postives = 358/562 (63.70%), Query Frame = 0
Query:   83 QLVSGVNWKINKGERVGIVGGNGAGKSTVLSVIAGHNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEAEARVTR-DPSDANLLSLERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLLGEPSLLLLDEPTNHLDSAAKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELY-RCGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKATMASAANSRKKTLEKM----AIIEAPLAAGK---RPHLRFPPPPKVMPE-LVKLQNASFGYPPAQ-----PLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQDLAQDLPQEHIALDYVLSTVRQ---KDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEY---RGTLVVISHNKAFVERLKVTHVGLIKNRRLVVEERMLRPSDWS-FDAQGGS--DARASPVV 620
            Q++  +N+++++ ER GIVG NG G+ST+L  I G    +EG   V  +  +GYL QTAVSGS + + +EA S+M   + A+  +   E R+   D SD  L  L  AQ  +  AGG   ++ V  +L GLGFQ +D  R C+DFSGGWQMRIALARLLL +P LL+LDEP+NHLDS+A++WL  +LS Y G++LLVSH+  LL +    ++AE+  + L  Y  C YD++L ++E RA+   A   R  KE AR+Q F+D+FGA AT A++A SR K +EKM     +   P+   +   RP L  P PPK + E L+ ++ A  GY   +     P+++ +D  + RG +++L GPNG GKST+L AL G LP L+G   +R+  E L +GVFTQDLAQ+L     A+D V +  R+    D++VS+Q AR  +G LGL  EK +R I  LSGGEKARVALS+FAL   NL++LDEPSNHLDV  +E L +AL+ +    G++VV+SH++AF E++  THVG +K+  L++EER L   DW  +D    +  +A  +PVV
Sbjct:    1 QILKNINFRVDRQERWGIVGPNGCGESTLLGAITGTVRIDEGEALVASKVKVGYLRQTAVSGSTKTVKQEAASEMEEINEAKAWMERLENRIAEGDMSDKTLNDLAEAQERFANAGGWTQDQDVDLVLKGLGFQPADSDRLCSDFSGGWQMRIALARLLLSQPDLLMLDEPSNHLDSSARDWLATYLSKYQGSILLVSHDISLL-SKSVNSIAEVAGKTLIQYVSCSYDKYLTEKEFRAKTAMAEYERNLKEAARLQEFVDKFGASATKAASAQSRVKMIEKMRKEGKLDPPPMGLTEKRWRPTLTLPDPPKGIGEKLLGIEGADIGYAVGEDGKGGPILQNIDLNINRGMKLILRGPNGAGKSTLLAALRGKLPLLSG---KRVENEKLRLGVFTQDLAQELDVTARAMDLVTAHAREGKDGDITVSNQDARNVMGRLGLGDEKPLRKIGELSGGEKARVALSMFALKASNLMLLDEPSNHLDVECIEALGDALSSWGGKDGSIVVVSHDQAFCEQVGFTHVGTVKDGGLIIEERDLDERDWERYDIASSTSLEAETAPVV 558          
BLAST of EWM25833.1 vs. NCBI_GenBank
Match: gi|926791061|ref|XP_013904004.1| (hypothetical protein MNEG_2972 [Monoraphidium neglectum] >gi|761974964|gb|KIZ04985.1| hypothetical protein MNEG_2972 [Monoraphidium neglectum])

HSP 1 Score: 449.899 bits (1156), Expect = 6.390e-145
Identity = 258/572 (45.10%), Postives = 362/572 (63.29%), Query Frame = 0
Query:   56 NVPTPNYGDTQGAELFLDGIAVAAGATQLVSGVNWKINKGERVGIVGGNGAGKSTVLSVIAG-------------HNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEA-EARVTRDPSDANLLSLERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLLGEPS----------LLLLDEPTNHLDSAAKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELYRCGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKATMASAANSRKKTLEKM--AIIEAPLAA-------GKRPHLRFPPPPKVMPELVKLQNASFGY--PPA--QPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERI-LGEGLEMGVFTQDLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEYRGTLVVISHNKAFVERLKVTHVGLIKN 589
            NVP    G+T GA + ++G+ V  G   L+  V+W++  G RVG+VG NGAGKST+L  +AG                   G + V P+  LGYL QTAVSGS R + +EA SQM A   A+ A+ EA EA +  DP  ++ L+   AQ  +  AGG D +RR+G +L+GLGF    + + C +FSGGWQMRIALARLLL +            LLLLDEPTNHLDSAA +WL  FL+   GT++LVSH+E LL    C  + E+R + L  +  GY +FL  REER     A AA    E  R++AF+ RFGAKA+ AS A SR+K L+K+  +  E P A+        ++  L+ PPPP    ++++LQ+ + G+  P A   P+V  V+  + +G R+++LGPNG GKST+LK + G++    G    R+ LGEG ++G+F+QDLAQ+LP +  ALDYV    R++D S++ ++ R ALGALGL G  A++ I +LSGGEKARVAL+VFAL+P N+L+LDE SNHLD  T+ETL+ AL E++G ++ I+HN++F E L+ TH+  ++N
Sbjct:    4 NVP---RGETAGAVMVIEGVTVQVGERDLLQDVDWRLMPGHRVGLVGANGAGKSTLLKALAGLKSVRCARARAVRAVRAVNGKLVVAPKVELGYLEQTAVSGSTRSVWDEARSQMRAIVRAEAAMTEASEAMLAGDPKASDRLA--DAQDAFEAAGGYDADRRIGGVLSGLGFAPEQWHKSCAEFSGGWQMRIALARLLLSDAGQAASKGASGGLLLLDEPTNHLDSAAVKWLSGFLATSGGTLVLVSHDEALLEG-ACDRICEVRGKKLHHFAAGYKKFLEMREERETIAAATAAATQAEIERLEAFVARFGAKASKASQAQSRQKQLDKLRESAPEIPAASSGAGPGDARKVALKLPPPPPCFTDVLELQDVATGWGSPDAGRPPVVSGVNAVIQKGQRVLVLGPNGAGKSTLLKTIGGTVQPWAG----RVKLGEGAKLGIFSQDLAQELPLDRPALDYVCEKAREEDSSITLEKCRQALGALGLVGSMALQTIGSLSGGEKARVALAVFALVPANVLLLDEASNHLDAQTIETLTGALREFKGAIIAITHNRSFAESLQATHILRVQN 565          
BLAST of EWM25833.1 vs. NCBI_GenBank
Match: gi|551556354|ref|XP_005765296.1| (hypothetical protein EMIHUDRAFT_66965, partial [Emiliania huxleyi CCMP1516] >gi|485615244|gb|EOD12867.1| hypothetical protein EMIHUDRAFT_66965, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 444.121 bits (1141), Expect = 1.096e-144
Identity = 250/554 (45.13%), Postives = 345/554 (62.27%), Query Frame = 0
Query:   64 DTQGAELFLDGIAVAAGATQLVSGVNWKINKGERVGIVGGNGAGKSTVLSVIA-------GHNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEA-EARVTRDPSDANLLSLERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLLGEP--------SLLLLDEPTNHLDSAAKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELYR-CGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKATMASAANSRKKTLEKMAIIEAP-----LAAGKRPHLRFPPPPKVMPELVKLQNASFGYP-PAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQDLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEYRGTLVVISHNKAFVERLKVTHVGLIKNRRLVV 594
            DT GA + + G+ V AG + L+  VNW +   ER  I G NG GKST+L  I+       G  L + G + V     LG L QTAVSG+   + EE +S+M  + AA+ A+  A E+ V    +D  L  LE AQ+E+  AGG ++E R+  +L GLGF+  ++  PC+ FSGGWQMRI LARLLL EP        +LL++DEPTNHLD+AA+ WL  ++  Y GTVL+VSH+ E LR     ++AE+    LELY+   YD+FL +REER   + A    Q +ER R+Q FIDR GAKA+ A+ A  R+  LE++A  +A      +   +RP L    PP      + L  A   +P  AQ ++   D  + +G R++L GPNG GKST+LKAL GSL    G   +R+  E LE+GVF QDLAQ+LPQ+ +A +YV  TVR+ D +V+D++ R  +GALGL G+KA R I  LSGGEKARVAL+ F L P N+L+LDEP+NHLDV  +  L +A+ +Y G LVV+SH++AF E +  THVG + + +++V
Sbjct:    6 DTGGAAIVVKGVDVWAGDSPLILDVNWSVMPNERWAIHGTNGCGKSTLLRAISAAANGDGGGRLADGGQLVVSSSLRLGMLEQTAVSGADTTVREEVVSRMERYQAAKAALDSAVESCVL--GTDEELECLEAAQSEYAAAGGYEIEARISKVLQGLGFETEEFDAPCSSFSGGWQMRIGLARLLLSEPESLRRAHTTLLIMDEPTNHLDAAARRWLGDYVGAYQGTVLVVSHDAEFLRRAS-NSIAEVAGGRLELYKSVTYDKFLEEREERQARVRATVEAQERERKRMQDFIDRMGAKASKATQAKDRQGKLERLAKQQAAAKALLIGQQRRPSLTLAAPPPCGMTPLALAGADIRHPLGAQDIITGADLAVAKGMRLILRGPNGAGKSTILKALAGSLRLGEG---QRVADERLELGVFAQDLAQELPQDVVAFEYVSQTVRRTDGTVTDERCRAVMGALGLVGDKAARSIGDLSGGEKARVALATFCLTPCNVLLLDEPTNHLDVDAIAALLDAIGKYNGALVVVSHDRAFCEAIDATHVGYVADGKVLV 553          
BLAST of EWM25833.1 vs. NCBI_GenBank
Match: gi|693498728|emb|CEG01375.1| (ABC transporter, conserved site [Ostreococcus tauri])

HSP 1 Score: 446.047 bits (1146), Expect = 8.903e-144
Identity = 253/579 (43.70%), Postives = 355/579 (61.31%), Query Frame = 0
Query:   55 TNVPTPNYGDTQGAELFLDGIAVAAGATQLVSGVNWKINKGERVGIVGGNGAGKSTVLSVIAGHNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEAEARV-TRDPSDANLLS--LERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLL-----GEPSLLLLDEPTNHLDSAAKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELYRCGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKATMASAANSRKKTLEKM------------AIIEAPLAA-GKRPHLRFPPPPKVMPELVKLQNASFGYPPAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQDLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEYRGTLVVISHNKAFVERLKVTHVGLIKNRRLVVEERM-LRPSDWSFDAQGG 611
             +V  P YG T GA L +D + ++ G   L+S  +  +  G++VG+VGGNG GKST+L  IAG    ++G+I + P   +GY  QTAVSGS   + +EA ++M   +AA+KA+ EAEA   T D  DA + +  L    AE+  AGG + E+R+ N+L+GLGF RS +   C D SGGWQMR+ALARLLL     GE  LLLLDEPTNHLD A+K WL  ++   + T ++VSHE ELL    CT +AE+R + L  Y   + +FL  R+ER    +A   +Q  E A ++ FI RF A A+ ++ A SR+K L+K+            A + +  A    + +L+   PP      +KL +A  GY P  P+++    TL R  R+V+LGPNG GKST+LK+++G++P ++G     I  E +++GVF+QDLAQ LP+E   L+YVL   R+ D    +Q  R ALGALG+TG  A+R I +LSGGEKARVAL+ F L P N L+LDEPSNHLDV  ++ L++ L ++ G L  +SHNKAF E L+ THV  +KN   V+E    L  +D+  + Q G
Sbjct:   76 NDVAIP-YGPTSGAALRIDEVMLSVGDVDLLSEASAMVMPGQKVGLVGGNGCGKSTLLKCIAGKRSVQDGAIAISPELEVGYFEQTAVSGSQLTVYQEARARMDRINAAEKALREAEAMCETDDDKDACMAADKLMDCLAEFEAAGGYEAEKRIANVLDGLGFSRSQWGVKCDDLSGGWQMRVALARLLLSPAGSGENGLLLLDEPTNHLDEASKTWLAKWIKDSSATTIIVSHEAELLDG-ACTHMAEVRGRGLHWYVGNFTKFLEARDERIALAKATYEKQQAEEAELKDFIRRFSANASKSTQAQSRQKLLDKLQKEMRKTVSAATATVSSDAAGDASKMNLKLTKPPPSNQVQLKLNDAVLGYKPETPILRG-SLTLERDMRVVVLGPNGAGKSTLLKSISGTMPLISG--EREITDERVKLGVFSQDLAQYLPKEKTCLEYVLDVAREDDPLCVEQFGRQALGALGITGTMALRKIGSLSGGEKARVALAAFVLQPRNCLLLDEPSNHLDVGAVKALTDGLQDWNGCLFAVSHNKAFCESLQPTHVIRVKNGEFVMENCYGLTDADFEHEEQTG 649          
BLAST of EWM25833.1 vs. NCBI_GenBank
Match: gi|1072230481|gb|OEU15214.1| (P-loop containing nucleoside triphosphate hydrolase protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 444.121 bits (1141), Expect = 1.711e-143
Identity = 264/559 (47.23%), Postives = 360/559 (64.40%), Query Frame = 0
Query:   63 GDTQGAELFLDGIAVAAGATQLVSGVNWKINKGERVGIVGGNGAGKSTVLSVIAGHNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEAEARVTR-DPSDANLLSLERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLLGEPSLLLLDEPTNHLDSAAKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELYR-CGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKATMASAANSRKKTLEKM----AIIEAPLAA---GKRPHLRFPPPPKVMPE-LVKLQNASFGYPPAQ-PLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQDLAQDLPQEHIALDYVLSTVR---QKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEY---RGTLVVISHNKAFVERLKVTHVGLIKNRRLVVEERMLRPSDW 604
            GDT+GA L LD +A++ GA+ L+  ++W +   ER GIVG NGAGKST+L  I G    +EG   VH    +GYL Q+AVSGS + + EEA S+MT    A++ + E    V   D S+  L  L  AQ  +   GG   E+ V  +L GLGF+  D  R C  FSGGWQMRIALARLLL +PSLLLLDEP+NHLDS+A++WL  +++ Y G+V+LVSH+  LL      ++AE+    L  YR C Y+++L ++E RA   +A      +E AR+Q+FID+FGA  T A +A SR   LEKM     +   P+A     K P L  PPPPK   E L+ L  A+ GY PA+ PL++ +D  ++RG +++L GPNG GKST+LKAL G++P +  A  ERI  + L++G FTQDLAQ+L  E  A+D V    R     D++V+D+ AR  LG LGL GEK +R ++ALSGGEKARVAL +FAL   NLL+LDEPSNHLDV  +  L++AL+ +    G +VVISH++ F +++  THVG + + +LV+E+R LR SDW
Sbjct:   71 GDTKGASLRLDNVAISRGASSLLKNIDWSVQPNERWGIVGINGAGKSTLLGAITGTVRMDEGHAFVHSNIRVGYLKQSAVSGSTKTVAEEARSEMTYIENAREKLEEVSKVVEDGDYSEEALNDLAVAQEHFETIGGYQQEQLVDTVLKGLGFESEDSDRLCKGFSGGWQMRIALARLLLSKPSLLLLDEPSNHLDSSARDWLGKYIATYDGSVVLVSHDVGLLDT-SVNSIAEIVGNTLIEYRSCSYNKYLEEKEFRAATAQAEYESNVEEAARLQSFIDKFGA-GTKAKSAQSRVIMLEKMKKEGKLDPPPMAIMRDTKIPELVLPPPPKPNGEYLLTLSGATIGYNPAEPPLLQNIDLKISRGMKLLLRGPNGAGKSTLLKALRGNVPEMIQA-GERIENDRLKLGTFTQDLAQELDPESRAVDLVTDYARMGADGDMTVTDEAARSVLGRLGLGGEKPLRKVAALSGGEKARVALGMFALKASNLLMLDEPSNHLDVGCIAGLAKALSNWGGQDGGIVVISHDREFCDKIGFTHVGTVMDGKLVLEQRDLRESDW 626          
BLAST of EWM25833.1 vs. NCBI_GenBank
Match: gi|551555620|ref|XP_005764977.1| (hypothetical protein EMIHUDRAFT_247380 [Emiliania huxleyi CCMP1516] >gi|485614828|gb|EOD12548.1| hypothetical protein EMIHUDRAFT_247380 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 444.121 bits (1141), Expect = 5.720e-142
Identity = 258/570 (45.26%), Postives = 355/570 (62.28%), Query Frame = 0
Query:   64 DTQGAELFLDGIAVAAGATQLVSGVNWKINKGERVGIVGGNGAGKSTVL-------SVIAGHNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEA-EARVTRDPSDANLLSLERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLLGEPS-----------LLLLDEPTNHLDSAAKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELYR-CGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKATMASAANSRKKTLEKMAIIEAP-----LAAGKRPHLRF--PPPPKVMPELVKLQNASFGYP-PAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQDLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEYRGTLVVISHNKAFVERLKVTHVGLIKNRRLVVEERMLRPSDWS 605
            DT GA + + G+ V AG + L+  VNW +   ER  I G NG GKST+L       +   G  L + G + V     LG L QTAVSG+   + EE +S+M  + AA+ A+  A E+ V    +D  L  LE AQ+E+  AGG ++E R+  +L GLGF+  ++  PC+ FSGGWQMRI LARLLL EP            LL++DEPTNHLD+AA+ WL  ++  Y GTVL+VSH+ E LR     ++AE+    LELY+   YD+FL +REER   + A    Q +ER R+Q FIDR GAKA+ A+ A  R+  LE++A  +A      +   +RP L    PPP  + P  + L  A   +P  AQ ++   D  + +G R++L GPNG GKST+LKAL GSL    G   +R+  E LE+GVF QDLAQ+LPQ+ +A +YV  TVR+ D +V+D++ R  +GALGL G+KA R I  LSGGEKARVAL+ F L P N+L+LDEP+NHLDV  +  L +A+ ++ G LVV+SH++AF E +  THVG + + +++VEER LR SD+S
Sbjct:    6 DTGGAAIVVKGVDVWAGDSPLILDVNWSVMPNERWAIHGTNGCGKSTLLRAISAAANGGGGGRLADGGQLVVSSSLRLGMLEQTAVSGADTTVREEVVSRMERYQAAKAALDSAVESCVL--GTDEELECLEAAQSEYAAAGGYEIEARISKVLQGLGFETEEFDAPCSSFSGGWQMRIGLARLLLSEPESLRRAHTTVRELLIMDEPTNHLDAAARRWLGDYVGAYQGTVLVVSHDAEFLRRAS-NSIAEVAGGRLELYKSVTYDKFLEEREERQARVRATVEAQERERKRMQDFIDRMGAKASKATQAKDRQGKLERLAKQQAAAKALLIGQQRRPSLTLAAPPPCGMTP--LALAGADIRHPLGAQDIITGADLAVAKGMRLILRGPNGAGKSTILKALAGSLRLGEG---QRVADERLELGVFAQDLAQELPQDVVAFEYVSQTVRRTDGTVTDERCRAVMGALGLVGDKAARSIGDLSGGEKARVALATFCLTPCNVLLLDEPTNHLDVDAIAALLDAIGKFNGALVVVSHDRAFCEAIDATHVGYVADGKVLVEERSLRQSDFS 567          
BLAST of EWM25833.1 vs. NCBI_GenBank
Match: gi|1199291754|gb|OUS46844.1| (hypothetical protein BE221DRAFT_145298 [Ostreococcus tauri])

HSP 1 Score: 442.965 bits (1138), Expect = 3.167e-137
Identity = 253/579 (43.70%), Postives = 355/579 (61.31%), Query Frame = 0
Query:   55 TNVPTPNYGDTQGAELFLDGIAVAAGATQLVSGVNWKINKGERVGIVGGNGAGKSTVLSVIAGHNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEAEARV-TRDPSDANLLS--LERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLL-----GEPSLLLLDEPTNHLDSAAKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELYRCGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKATMASAANSRKKTLEKM------------AIIEAPLAA-GKRPHLRFPPPPKVMPELVKLQNASFGYPPAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQDLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEALAEYRGTLVVISHNKAFVERLKVTHVGLIKNRRLVVEERM-LRPSDWSFDAQGG 611
             +V  P YG T GA L +D + ++ G   L+S  +  +  G++VG+VGGNG GKST+L  IAG    ++G+I + P   +GY  QTAVSGS   + +EA ++M   +AA+KA+ EAEA   T D  DA + +  L    AE+  AGG + E+R+ N+L+GLGF RS +   C D SGGWQMR+ALARLLL     GE  LLLLDEPTNHLD A+K WL  ++   + T ++VSHE ELL    CT +AE+R + L  Y   + +FL  R+ER    +A   +Q  E A ++ FI RF A A+ ++ A SR+K L+K+            A + +  A    + +L+   PP      +KL +A  GY P  P+++    TL R  R+V+LGPNG GKST+LK+++G++P ++G     I  E +++GVF+QDLAQ LP+E   L+YVL   R+ D    +Q  R ALGALG+TG  A+R I +LSGGEKARVAL+ F L P N L+LDEPSNHLDV  ++ L++ L ++ G L  +SHNKAF E L+ THV  +KN   V+E    L  +D+  + Q G
Sbjct:  568 NDVAIP-YGPTSGAALRIDEVMLSVGDVDLLSEASAMVMPGQKVGLVGGNGCGKSTLLKCIAGKRSVQDGAIAISPELEVGYFEQTAVSGSQLTVYQEARARMDRINAAEKALREAEAMCETDDDKDACMAADKLMDCLAEFEAAGGYEAEKRIANVLDGLGFSRSQWGVKCDDLSGGWQMRVALARLLLSPAGSGENGLLLLDEPTNHLDEASKTWLAKWIKDSSATTIIVSHEAELLDG-ACTHMAEVRGRGLHWYVGNFTKFLEARDERIALAKATYEKQQAEEAELKDFIRRFSANASKSTQAQSRQKLLDKLQKEMRKTVSAATATVSSDAAGDASKMNLKLTKPPPSNQVQLKLNDAVLGYKPETPILRG-SLTLERDMRVVVLGPNGAGKSTLLKSISGTMPLISG--EREITDERVKLGVFSQDLAQYLPKEKTCLEYVLDVAREDDPLCVEQFGRQALGALGITGTMALRKIGSLSGGEKARVALAAFVLQPRNCLLLDEPSNHLDVGAVKALTDGLQDWNGCLFAVSHNKAFCESLQPTHVIRVKNGEFVMENCYGLTDADFEHEEQTG 1141          
The following BLAST results are available for this feature:
BLAST of EWM25833.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107700|gb|EWM25833.1|0.000e+0100.00atp-binding cassette superfamily [Nannochloropsis ... [more]
gi|298710208|emb|CBJ26283.1|0.000e+046.72ABC transporter, ATP-binding protein [Ectocarpus s... [more]
gi|1210517730|dbj|GAX23426.1|1.178e-14740.21hypothetical protein FisN_15Lh147 [Fistulifera sol... [more]
gi|223997230|ref|XP_002288288.1|5.725e-14745.02predicted protein, partial [Thalassiosira pseudona... [more]
gi|926791061|ref|XP_013904004.1|6.390e-14545.10hypothetical protein MNEG_2972 [Monoraphidium negl... [more]
gi|551556354|ref|XP_005765296.1|1.096e-14445.13hypothetical protein EMIHUDRAFT_66965, partial [Em... [more]
gi|693498728|emb|CEG01375.1|8.903e-14443.70ABC transporter, conserved site [Ostreococcus taur... [more]
gi|1072230481|gb|OEU15214.1|1.711e-14347.23P-loop containing nucleoside triphosphate hydrolas... [more]
gi|551555620|ref|XP_005764977.1|5.720e-14245.26hypothetical protein EMIHUDRAFT_247380 [Emiliania ... [more]
gi|1199291754|gb|OUS46844.1|3.167e-13743.70hypothetical protein BE221DRAFT_145298 [Ostreococc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4860rna4860Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications