EWM25824.1, cds4839 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25824.1 vs. NCBI_GenBank
Match: gi|585107691|gb|EWM25824.1| (c2h2 zinc finger protein [Nannochloropsis gaditana]) HSP 1 Score: 1104.35 bits (2855), Expect = 0.000e+0 Identity = 538/538 (100.00%), Postives = 538/538 (100.00%), Query Frame = 0
Query: 1 METNGANGSGRAPVTEAGGGPDAQDGLRRPVTAGLEQSAWTQQEKRVIKSTRYRQLCELGGSASFEPACLERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCDNDDPNDFIPSRGGAVACMRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKAAELFAAYRDARDRLFDFEAVVAACLIAAHLEVLVEEGSDGSGVTFAFACPGCGLRGFTVKRDAEKHCVVSTGPAGSSDSMEGSLEHSAGAGGRSHGGGRPQSWRKASCEAAADPDVAKMGLAETRRLLLWVSEGAPYQQAAVDGVCAGLQAEMRSQSGKESGSDGEGSGDGQAPTEGEGDTREVERESAFKAGQLLVMASLKVLTRWCGDDSEAGRLFFDYLQGVKKRKMERGALLEEEEQDRKRRRQYEERPIFQELSVSLKSEGASNNSTDATTPATVS 538
METNGANGSGRAPVTEAGGGPDAQDGLRRPVTAGLEQSAWTQQEKRVIKSTRYRQLCELGGSASFEPACLERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCDNDDPNDFIPSRGGAVACMRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKAAELFAAYRDARDRLFDFEAVVAACLIAAHLEVLVEEGSDGSGVTFAFACPGCGLRGFTVKRDAEKHCVVSTGPAGSSDSMEGSLEHSAGAGGRSHGGGRPQSWRKASCEAAADPDVAKMGLAETRRLLLWVSEGAPYQQAAVDGVCAGLQAEMRSQSGKESGSDGEGSGDGQAPTEGEGDTREVERESAFKAGQLLVMASLKVLTRWCGDDSEAGRLFFDYLQGVKKRKMERGALLEEEEQDRKRRRQYEERPIFQELSVSLKSEGASNNSTDATTPATVS
Sbjct: 1 METNGANGSGRAPVTEAGGGPDAQDGLRRPVTAGLEQSAWTQQEKRVIKSTRYRQLCELGGSASFEPACLERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCDNDDPNDFIPSRGGAVACMRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKAAELFAAYRDARDRLFDFEAVVAACLIAAHLEVLVEEGSDGSGVTFAFACPGCGLRGFTVKRDAEKHCVVSTGPAGSSDSMEGSLEHSAGAGGRSHGGGRPQSWRKASCEAAADPDVAKMGLAETRRLLLWVSEGAPYQQAAVDGVCAGLQAEMRSQSGKESGSDGEGSGDGQAPTEGEGDTREVERESAFKAGQLLVMASLKVLTRWCGDDSEAGRLFFDYLQGVKKRKMERGALLEEEEQDRKRRRQYEERPIFQELSVSLKSEGASNNSTDATTPATVS 538
BLAST of EWM25824.1 vs. NCBI_GenBank
Match: gi|553196430|ref|XP_005856342.1| (c2h2 zinc finger protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292722|gb|EKU20024.1| c2h2 zinc finger protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 490.73 bits (1262), Expect = 1.297e-170 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
Query: 1 METNGANGSGRAPVTEAGGGPDAQDGLRRPVTAGLEQSAWTQQEKRVIKSTRYRQLCELGGSASFEPACLERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCDNDDPNDFIPSRGGAVACMRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQK 233
METNGANGSGRAPVTEAGGGPDAQDGLRRPVTAGLEQSAWTQQEKRVIKSTRYRQLCELGGSASFEPACLERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCDNDDPNDFIPSRGGAVACMRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQK
Sbjct: 9 METNGANGSGRAPVTEAGGGPDAQDGLRRPVTAGLEQSAWTQQEKRVIKSTRYRQLCELGGSASFEPACLERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCDNDDPNDFIPSRGGAVACMRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQK 241
BLAST of EWM25824.1 vs. NCBI_GenBank
Match: gi|1173947647|gb|OQR95873.1| (hypothetical protein THRCLA_07499 [Thraustotheca clavata]) HSP 1 Score: 131.339 bits (329), Expect = 1.759e-29 Identity = 76/224 (33.93%), Postives = 119/224 (53.12%), Query Frame = 0
Query: 70 LERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCDNDDPNDFIP--SRGGAVAC----MRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKAAELFAAYRDARDRLFDFEAVVAACLIAAHL 287
+E +I + PD ++ ++ I ++ + + + + + A + + C N + N+FI +RG + CG+ D+++HEG YR F GEED+SHHGPA N L+S +NL T + Q N R +F N+ + G TR+ YKD K KA R++ GANL LH +V +A ++FA +RD R+ + FEAVVA C+I A+L
Sbjct: 50 MEERITNLLVPDMKVNDIIQLIKKMKQAGKSDADEFSEADAEINAAPRFVCDV-CGNSEQNNFITDYARGDTICTGADGHGCGNVVQDHIVHEGNAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGK---DERRTRIGYKDQMKQKAIRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYL 269
BLAST of EWM25824.1 vs. NCBI_GenBank
Match: gi|635364048|emb|CCI47470.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 129.028 bits (323), Expect = 5.467e-29 Identity = 94/305 (30.82%), Postives = 149/305 (48.85%), Query Frame = 0
Query: 70 LERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDM--IDGVPALRAVKQKCTNTNCDNDDPNDFIP--SRGGAVAC----MRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTG---LRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKAAELFAAYRDARDRLFDFEAVVAACLIAAHLE-----------VLVEEGSDGSGV---------TFAFACPGCGLRGFTVKRDAEKHCVVSTGPAGSSDSMEGSLEH 343
+E +IV + P+ ++ V+ I ++ + + + +D P A + +C N C N + N+FI +RG + CG D+++HEG YR F GEED+SHHGPA N L+S S+NL T + + G R + ++S +G+D TR+ YKD K KA R++ +NL LH +V +A ++FA +RD R+ + FEA+VA C+IAA++ + VE G+ V F C C ++ F +R + H TG + GSLE+
Sbjct: 1 MEERIVNVLVPELKVSDVMMLIRKMKQSGKSDADEFSELDAEPKT-APRFRCEN--CGNTEQNNFITDYARGDTICNGPDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTSHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKD------ERRTRIGYKDQMKQKACRLIDHTVSNLDLHEIVGNRAKKMFAEFRDVREHVHQFEAMVAGCVIAAYIATGREMYTAQHGLCVEVDPFGNSVPSKPIDETKLHPFTCTLCDMK-FNARRGMQFH--KCTGRPDTVKVENGSLEN 293
BLAST of EWM25824.1 vs. NCBI_GenBank
Match: gi|1173932970|gb|OQR84852.1| (hypothetical protein ACHHYP_12638 [Achlya hypogyna]) HSP 1 Score: 129.028 bits (323), Expect = 1.115e-28 Identity = 89/285 (31.23%), Postives = 134/285 (47.02%), Query Frame = 0
Query: 70 LERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCDNDDPNDFIP--SRGGAVAC----MRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKAAELFAAYRDARDRLFDFEAVVAACLIAAHLEVLVEEGSDGSGVTF-------------------------AFACPGCGLRGFTVKRDAEKH 323
+E +I + PD ++ ++ I ++ + + + + L A + + C N + N+FI +RG + CG+ D+++HEG YR F GEED+SHHGPA N L+S +NL T + Q N R +F N+ + G TR+ YKD K KA R++ GANL LH +V +A ++FA +RD R+ + FEAVVA C+I A+L E S + V F+C CGL F KR + H
Sbjct: 56 MEDRITNLLVPDMKVNDIIQLIKKMKQAGKSDADEFSELDAELNAAPRFVCDA-CGNSEQNNFITDYARGDTICTGADGRGCGNVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGK---DERRTRIGYKDQMKQKACRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYLTTGKEMYSAQAAVKIGPKKQAGIAQLQIPAHKAVDDKKLHPFSCSKCGL-IFNAKRGMQFH 335
BLAST of EWM25824.1 vs. NCBI_GenBank
Match: gi|673043399|ref|XP_008875660.1| (hypothetical protein H310_10945 [Aphanomyces invadans] >gi|574468449|gb|ETV95467.1| hypothetical protein H310_10945 [Aphanomyces invadans]) HSP 1 Score: 129.798 bits (325), Expect = 1.151e-28 Identity = 81/228 (35.53%), Postives = 122/228 (53.51%), Query Frame = 0
Query: 70 LERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCD---NDDPNDFIP--SRGGAVACMR-----CGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKAAELFAAYRDARDRLFDFEAVVAACLIAAHL 287
+E +I + PD + VG + ++ ++++ K D L A CD N + +++I +RG V CM CG+ D+++HEG YR F GEED+SHHGPA N L+S +NL T + Q N R ++F N+ + G TR+ YKD K KA R++ GANL LH +V +A ++FA +RD R+ + FEAVVA C+I A++
Sbjct: 85 MEDRIANLLVPDMK----VGDVIQLIKKMKQAGKSDADEFSELDAEMNSAPRFVCDVCGNTEQHNYITDYARGDTV-CMGPDGKGCGNVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSMGHNLRTMISQDGEQSANLRRASEFVEMNLSQMGK---DERRTRIGYKDQMKQKACRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYM 304
BLAST of EWM25824.1 vs. NCBI_GenBank
Match: gi|325187979|emb|CCA22522.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 129.028 bits (323), Expect = 1.224e-28 Identity = 78/228 (34.21%), Postives = 125/228 (54.82%), Query Frame = 0
Query: 70 LERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDM--IDGVPALRAVKQKCTNTNCDNDDPNDFIP--SRGGAVAC----MRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTG---LRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKAAELFAAYRDARDRLFDFEAVVAACLIAAH 286
+E +IV + P+ ++ V+ I ++ + + + +D P A + +C N C N + N+FI +RG + + CG D+++HEG YR F GEED+SHHGPA N L+S S+NL T + + G R + ++S +G+D TR+ YKD K KA R++ +NL LH +V +A ++FA +RD R+ + FEA+VA C+IAA+
Sbjct: 76 MEERIVNVLVPELQVSDVMMLIRKMKQSGKSDADEFTELDAEPKT-APRFRCEN--CGNTEQNNFITDYARGDTICNGPDGIGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTSHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKD------ERRTRIGYKDQMKQKACRLIDHTVSNLDLHEIVGNRAKKMFAEFRDVREHVHQFEAMVAGCVIAAY 294
BLAST of EWM25824.1 vs. NCBI_GenBank
Match: gi|635364049|emb|CCI47471.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 128.642 bits (322), Expect = 1.871e-28 Identity = 94/305 (30.82%), Postives = 149/305 (48.85%), Query Frame = 0
Query: 70 LERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDM--IDGVPALRAVKQKCTNTNCDNDDPNDFIP--SRGGAVAC----MRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTG---LRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKAAELFAAYRDARDRLFDFEAVVAACLIAAHLE-----------VLVEEGSDGSGV---------TFAFACPGCGLRGFTVKRDAEKHCVVSTGPAGSSDSMEGSLEH 343
+E +IV + P+ ++ V+ I ++ + + + +D P A + +C N C N + N+FI +RG + CG D+++HEG YR F GEED+SHHGPA N L+S S+NL T + + G R + ++S +G+D TR+ YKD K KA R++ +NL LH +V +A ++FA +RD R+ + FEA+VA C+IAA++ + VE G+ V F C C ++ F +R + H TG + GSLE+
Sbjct: 75 MEERIVNVLVPELKVSDVMMLIRKMKQSGKSDADEFSELDAEPKT-APRFRCEN--CGNTEQNNFITDYARGDTICNGPDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTSHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKD------ERRTRIGYKDQMKQKACRLIDHTVSNLDLHEIVGNRAKKMFAEFRDVREHVHQFEAMVAGCVIAAYIATGREMYTAQHGLCVEVDPFGNSVPSKPIDETKLHPFTCTLCDMK-FNARRGMQFH--KCTGRPDTVKVENGSLEN 367
BLAST of EWM25824.1 vs. NCBI_GenBank
Match: gi|669139900|ref|XP_008605518.1| (hypothetical protein SDRG_01752 [Saprolegnia diclina VS20] >gi|530742432|gb|EQC40674.1| hypothetical protein SDRG_01752 [Saprolegnia diclina VS20]) HSP 1 Score: 128.257 bits (321), Expect = 2.218e-28 Identity = 77/224 (34.38%), Postives = 119/224 (53.12%), Query Frame = 0
Query: 70 LERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCDNDDPNDFIP--SRGGAVAC----MRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKAAELFAAYRDARDRLFDFEAVVAACLIAAHL 287
+E +I + PD ++ ++ I ++ + + + + L A + + C N + N+FI +RG + CG+ D+++HEG YR F GEED+SHHGPA N L+S +NL T + Q N R +F N+ + G TR+ YKD K KA R++ GANL LH +V +A ++FA +RD R+ + FEAVVA C+I A+L
Sbjct: 58 MEDRITNLLVPDMKVSDIIQLIKKMKQAGKSDADEFSELDAELNAAPRFVCDA-CGNAEQNNFITDYARGDTICTGPDGRGCGNVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGK---DERRTRIGYKDQMKQKACRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYL 277
BLAST of EWM25824.1 vs. NCBI_GenBank
Match: gi|698792478|ref|XP_009829271.1| (hypothetical protein H257_05943 [Aphanomyces astaci] >gi|574115928|gb|ETV81413.1| hypothetical protein H257_05943 [Aphanomyces astaci]) HSP 1 Score: 127.872 bits (320), Expect = 4.957e-28 Identity = 79/228 (34.65%), Postives = 123/228 (53.95%), Query Frame = 0
Query: 70 LERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCD---NDDPNDFIP--SRGGAVACMR-----CGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKAAELFAAYRDARDRLFDFEAVVAACLIAAHL 287
+E +I + PD + VG + ++ +++++ K D L A C+ N + +++I +RG V CM CG+ D+++HEG YR F GEED+SHHGPA N L+S +NL T + Q N R ++F N+ + G TR+ YKD K KA R++ GANL LH +V +A ++FA +RD R+ + FEAVVA C+I +++
Sbjct: 79 MEERIANLLVPDMK----VGDVIQLIKKMKQSGKSDADEFSELDAEMNSAPRFVCEVCGNTEQHNYITDYARGDTV-CMGPDGKGCGNVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSMGHNLRTMISQDGEQSANLRRASEFVEMNLSQMGK---DERRTRIGYKDQMKQKACRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDSYM 298 The following BLAST results are available for this feature:
BLAST of EWM25824.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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