EWM25836.1, cds4836 (CDS) Nannochloropsis gaditana

Overview
NameEWM25836.1
Unique Namecds4836
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:492209..493570 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25836.1
ProductProtein of unknown function DUF482
Orig transcript idgnl|cribi|Naga_100021g19.8779.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:492209..493570 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR016181Acyl_CoA_acyltransferase
IPR007434DUF482
Homology
BLAST of EWM25836.1 vs. NCBI_GenBank
Match: gi|585107703|gb|EWM25836.1| (Protein of unknown function DUF482 [Nannochloropsis gaditana])

HSP 1 Score: 946.806 bits (2446), Expect = 0.000e+0
Identity = 453/453 (100.00%), Postives = 453/453 (100.00%), Query Frame = 0
Query:    1 MMVTSTGGSSEKEAATMERETQYFLTVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKFREPLCLVLARDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSAVRGRRDGQGGEGGQAPGEGGE 453
            MMVTSTGGSSEKEAATMERETQYFLTVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKFREPLCLVLARDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSAVRGRRDGQGGEGGQAPGEGGE
Sbjct:    1 MMVTSTGGSSEKEAATMERETQYFLTVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKFREPLCLVLARDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSAVRGRRDGQGGEGGQAPGEGGE 453          
BLAST of EWM25836.1 vs. NCBI_GenBank
Match: gi|553195260|ref|XP_005856114.1| (hypothetical protein NGA_0333410 [Nannochloropsis gaditana CCMP526] >gi|422292949|gb|EKU20250.1| hypothetical protein NGA_0333410 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 945.266 bits (2442), Expect = 0.000e+0
Identity = 453/453 (100.00%), Postives = 453/453 (100.00%), Query Frame = 0
Query:    1 MMVTSTGGSSEKEAATMERETQYFLTVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKFREPLCLVLARDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSAVRGRRDGQGGEGGQAPGEGGE 453
            MMVTSTGGSSEKEAATMERETQYFLTVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKFREPLCLVLARDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSAVRGRRDGQGGEGGQAPGEGGE
Sbjct:   56 MMVTSTGGSSEKEAATMERETQYFLTVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKFREPLCLVLARDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSAVRGRRDGQGGEGGQAPGEGGE 508          
BLAST of EWM25836.1 vs. NCBI_GenBank
Match: gi|553181898|ref|XP_005853640.1| (hypothetical protein NGA_0333420, partial [Nannochloropsis gaditana CCMP526] >gi|422295422|gb|EKU22721.1| hypothetical protein NGA_0333420, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 903.664 bits (2334), Expect = 0.000e+0
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0
Query:    1 MMVTSTGGSSEKEAATMERETQYFLTVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKFREPLCLVLARDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSA 432
            MMVTSTGGSSEKEAATMERETQYFLTVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKFREPLCLVLARDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSA
Sbjct:   56 MMVTSTGGSSEKEAATMERETQYFLTVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKFREPLCLVLARDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSA 487          
BLAST of EWM25836.1 vs. NCBI_GenBank
Match: gi|873231779|emb|CEM07672.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 386.726 bits (992), Expect = 2.951e-127
Identity = 206/419 (49.16%), Postives = 275/419 (65.63%), Query Frame = 0
Query:   19 RETQYFLTVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKF--REPLCLVLARDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSAVRG 435
            R+ +Y   V  HT I+ I+ E W+  +   DSPF++++W   LE S CA   TGW P HLT+        E A  DD   ++A  P+YIKTHS GE+IFD+ WA  +Y +G+ Y+PK+L AVPFTPA GAR+L++   +   +  +RR++  F++ LA+ +  SSVHVNFC +EE  +L+     Y+ R S QFHW N NKD  G  Y+SFDEYLS F+ KRR  IK+ERR++YE  G  L VLRG DI  + + +   F+LY +TIDKL +GRQYL+  FF LL++    R  LCL+LA+   G +VAGT NV+     FYGRYWG  A E +KNLHFETCYYKS+EYCI+ G+ AM+PGAG  DFKFMRG++P   HS H +V P LR+A+  FL+ ER  V    + L+EK+ VRG
Sbjct:   47 RKNRYRFQV--HTKIADIKKEVWDRCVSETDSPFVEYDWLYSLEESNCACEGTGWAPFHLTVHE------EEAPDDD---ILAVVPLYIKTHSNGEYIFDHSWADFSYSNGIPYFPKLLCAVPFTPAGGARILIRPSYTDE-RNFLRRIIASFMRKLAEDSNISSVHVNFCTQEEGESLEAV--GYMPRKSTQFHWRNYNKDT-GQRYTSFDEYLSMFKGKRRGAIKRERRAVYEKEGCELVVLRGDDITPALYRT--AFELYKTTIDKLIWGRQYLSVRFFELLQETGWGRRNLCLILAK-KDGRIVAGTINVVKAG-HFYGRYWG--AFEFVKNLHFETCYYKSVEYCIQEGIDAMQPGAGGGDFKFMRGYDPAICHSSHFIVRPELRRAIRAFLEMERDRVQMVADELNEKTKVRG 444          
BLAST of EWM25836.1 vs. NCBI_GenBank
Match: gi|1210519362|dbj|GAX21746.1| (uncharacterized protein FisN_31Lh032 [Fistulifera solaris])

HSP 1 Score: 374.785 bits (961), Expect = 7.454e-122
Identity = 201/470 (42.77%), Postives = 272/470 (57.87%), Query Frame = 0
Query:   10 SEKEAATMERETQYFLTVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLS-QPMQRE----IRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQP---------------------------PYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLL-KDKFREPLCLVLARDAGGE---------VVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSAVRGRR 437
            ++K+  +     +  +  K H++I  I AE W+S L    SPFL H W  CLE S CA P+TGW P H++I M               + V   P+YIK HS+GEFIFD ++A AAY++G+DYYPK+LV VPFTPA+G R+L    L  Q   RE    + + V  FL+ LA SN  SSVH+NF  E E   L    P                            YL RTS+Q+HW N N +  G P+ SFD+YLS F+SK+RI I++ER+ + E+ G+ + V+ G+DI       + IFK+Y+STIDK+ +GRQYL   FF+LL +  F + L  V AR    E         V AGTFN++  D  FYGRYWGC+   ++KNLHFE CY+ +I+YCI  GL  MEPGAG  D+K+ RGF+P  +HS+H++ HPGLR+AV  FL  E        ++L E+SAV  R+
Sbjct:   79 TQKDDKSSPASNERIVEFKLHSSIGSISAEVWDSCLSNTSSPFLSHAWLRCLEESKCASPSTGWVPSHVSILM-------------DSQTVGFVPLYIKGHSLGEFIFDQQFAEAAYQNGIDYYPKLLVGVPFTPATGHRILWHPQLVLQSFSREEIKTLNQSVARFLKQLASSNRVSSVHINFLTESEAEDLGGPLPLPVEDSEDVKGVALKIRSIFQRLDIKDTYLRRTSLQYHWQNVNPNNGGKPFESFDDYLSCFKSKKRINIRRERKKVLEEEGVVIDVITGKDILQYPGLVERIFKIYLSTIDKMMWGRQYLTMEFFQLLARSDFIDYLVFVCARQNVSEREDKLEASDVFAGTFNIV-KDGVFYGRYWGCLPDREVKNLHFECCYWSAIDYCIRNGLRRMEPGAGGGDYKWARGFDPALIHSVHYICHPGLRRAVGQFLIDETENNVELTKFLLERSAVGNRQ 534          
BLAST of EWM25836.1 vs. NCBI_GenBank
Match: gi|545704412|ref|XP_005704529.1| (hypothetical protein Gasu_45090 [Galdieria sulphuraria] >gi|452820973|gb|EME28009.1| hypothetical protein Gasu_45090 [Galdieria sulphuraria])

HSP 1 Score: 321.627 bits (823), Expect = 2.994e-102
Identity = 162/404 (40.10%), Postives = 243/404 (60.15%), Query Frame = 0
Query:   32 NISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKFREPLCLVLA-RDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSAVR 434
            ++ Q++ E+WN L+  +  PF ++EW   LE  GC     GW P HL +           E  +   + A  P+Y+KTHS GEFIFD  W   A    L YYPK++  VPFTP +  R+L    + +P    +   +   L+DL      +S+++NF  ++E+      +  +LHR S+Q+H+ N   D +G P+ +FDE+L   +SK+RI++K+ERR IY++  + LQVL    IP   F    +++LY STID+ FYGR YL+ +FF+ L + +R+ LC ++A RD   +++AGTFN+I N  RF+GRYWGC+  E +  LHFETCYYK IEYCIE GL ++EPGAG  DFKF+RGF P  VHS+H+  +    + ++ F++ E   +      L+E+S +R
Sbjct:   73 SMEQVRPEQWNQLISEDSCPFTEYEWLFGLEKCGCVSEQVGWQPLHLLL-----------EDPNSKTIYAVLPLYVKTHSFGEFIFDYVWQDVASSLSLKYYPKLISMVPFTPVTSRRILTISEMQRPY---LLSQMAECLKDLVSELSIASINLNFVADDEVSIF--TRHGFLHRKSIQYHFRN---DCNGRPFHNFDEFLQMMKSKKRIQVKRERRRIYDEENIRLQVLLAHQIPSELFSQ--MYQLYKSTIDRFFYGRLYLSPSFFQYLAENYRKYLCFIVAYRD--DKLIAGTFNMIKNG-RFHGRYWGCL--EQVSGLHFETCYYKPIEYCIEKGLQSVEPGAGGGDFKFVRGFNPEIVHSLHYFTNTRFAKIMEAFIKEESLNIDYVCSRLNEQSTLR 450          
BLAST of EWM25836.1 vs. NCBI_GenBank
Match: gi|1084671528|gb|OGP19300.1| (hypothetical protein A2038_02870 [Deltaproteobacteria bacterium GWA2_57_13])

HSP 1 Score: 317.39 bits (812), Expect = 1.267e-101
Identity = 174/409 (42.54%), Postives = 248/409 (60.64%), Query Frame = 0
Query:   26 TVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKFREPLCLVLARDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSAVR 434
            TVK    IS+++ E+W+ L+    SPF++ +W D LE +GC    TGW P H+ I             + PGEL+ A P+Y+K HS GEF+FD EWA  A   G+ YYPK+LV VPFTP +G R L      +P   E+ R++G  L  +A+ N  SSVHVNFC E+E   LQ  Q  ++ RT +QF W NR+       Y +FD+YLSAFRS RR K+K+ERR + +  G++++ + G ++  ++F +  +F+LY   +DKL+YGRQYL   FF  L  +F+  LCL+LA +    ++AGTFNV  + + FYGRYWG  A E+ + LHF  CYY +IE+CI   L   E GAG S FK +RG +P    SMH++V P L++ ++ +L+ E   V      L EKS ++
Sbjct:    6 TVKIIRKISEVRREDWDRLVG-GGSPFMKWDWLDALEGAGCVQERTGWLPHHVVI-------------EKPGELLGACPMYLKLHSQGEFVFDYEWAELARELGVSYYPKLLVGVPFTPVTGPRFLTSSRAHRP---ELIRVLGQLLVRIAEENKLSSVHVNFCLEDEAELLQ--QLGFIRRTGLQFQWQNRD-------YGTFDDYLSAFRSDRRNKVKRERRELLQQ-GVSIRAIEGEELTPAHFST--MFQLYKGHVDKLYYGRQYLTREFFSELARRFKPNLCLILA-ERESRIIAGTFNV-QDHEAFYGRYWG--AFEEQRYLHFNVCYYAAIEHCIRKRLQRFEAGAGGS-FKQLRGLDPQPTASMHYIVEPRLKRVIERYLRQETSFVDERRATLLEKSQLK 380          
BLAST of EWM25836.1 vs. NCBI_GenBank
Match: gi|1084818482|gb|OGQ53132.1| (hypothetical protein A2W66_00100 [Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12])

HSP 1 Score: 306.605 bits (784), Expect = 2.500e-97
Identity = 171/411 (41.61%), Postives = 248/411 (60.34%), Query Frame = 0
Query:   25 LTVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKFREPLCLVLA-RDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSAVR 434
            L +K    IS+++  +W+ LL  + SPF++ +W D LE SGC    TGW P HL +             +  G++V    +Y+K HSMGEF+FD EWA  A+R G+ YYPK+LV +PFTP +G R L      +  +RE+ +++G  L  +A+ N  SSVHVNFC  +E  ALQ     Y+ R  +QFHW NR        Y SFDEYL+AFRS RR KIK+ERR + +  G+T++ ++G ++  +   +  +F+LY + +++L YG +YL   FF  +  +F   +CL+LA RDA  +++AGTFN I +    YGRYWG    E+++ LHF  CYY +IE+CI +GL   E GAG S FK MRG +P    S+H++VH G R+AV+  L  ER  + G    L E+S ++
Sbjct:    5 LAIKIIRMISEVERADWDRLLG-QGSPFMKWDWLDSLEQSGCVNEETGWLPHHLIV-------------EREGKIVGXXXMYLKLHSMGEFVFDFEWAEYAHRLGIRYYPKMLVGIPFTPVTGPRFLTD---PRENRRELIQLMGRALMQVAEDNKISSVHVNFCLPDEGEALQGL--GYIPRLGLQFHWQNRG-------YRSFDEYLAAFRSDRRTKIKRERRELSQQ-GITIRAVQGDELKAAQLGA--MFQLYKNHVERLTYGHRYLTREFFDAMSRRFTPHICLMLAERDA--KIIAGTFN-IQDGSVLYGRYWGSF--EEVRYLHFNVCYYSAIEHCILSGLERFEAGAGGS-FKQMRGLDPEPTTSLHYIVHEGFRRAVEKHLSQEREAIRGKRVTLLERSQLK 380          
BLAST of EWM25836.1 vs. NCBI_GenBank
Match: gi|1084851476|gb|OGQ82534.1| (hypothetical protein A3F90_16000 [Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19])

HSP 1 Score: 306.22 bits (783), Expect = 3.585e-97
Identity = 176/420 (41.90%), Postives = 245/420 (58.33%), Query Frame = 0
Query:   26 TVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKLFYGRQYLNEAFFRLLKDKFREPLCLVLA-RDAGGEVVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGFEPVHVHSMHHLVHPGLRQAVDDFLQYERREVSGTVEYLSEKSAVRGRRDGQGGEG 444
            T+K    IS++  + W+ LL    SPFL+ +W D LE + C    TGW P HL +             +  GE+V A P+Y+K HSMGEF+FD EWA  A+R G+ YYPK+LV VPFTP +G R L     +Q  +  + +++G  L  +AK N  SS+HVNFC E+E  AL+E    +  R  +QF W N         Y+SFD+YL +FRS+RR KIK+ERR +     +T++ + G ++   +  +  +FKLY + ID+L+YGRQYL   FF  L  +F   +CL+LA RD+  +V+AGTFNV   D   YGRYWG  A ED + LHF  CYY +IE+CI  GL   E GAG S FK  RG EP    SMH+++    R+A++ +L+ ER  +      L E S ++     +G EG
Sbjct:    6 TIKIIRKISEVPRDAWDRLLN-HGSPFLKWDWLDALEQTRCVGEPTGWLPHHLVV-------------ERSGEIVGACPMYLKLHSMGEFVFDYEWAEFAHRLGIQYYPKMLVGVPFTPVTGPRFLTA---AQADRNGLLQLMGRALAQVAKDNKISSIHVNFCREDEAMALEEI--GFARRIGLQFQWRN-------CGYNSFDDYLGSFRSERRNKIKRERRELLSQR-ITIRAVGGEELTSGHMRT--MFKLYKTHIDELYYGRQYLTPEFFEELARRFAPHVCLMLAERDS--QVIAGTFNV-QGDSALYGRYWG--ALEDQRYLHFNVCYYAAIEHCIRNGLERFEAGAGGS-FKQFRGLEPQPTTSMHYIIDERFRRAIEKYLREERAMILRKHSALLENSQLKKETGHEGKEG 390          
BLAST of EWM25836.1 vs. NCBI_GenBank
Match: gi|219122087|ref|XP_002181385.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407371|gb|EEC47308.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 299.671 bits (766), Expect = 4.260e-95
Identity = 160/374 (42.78%), Postives = 222/374 (59.36%), Query Frame = 0
Query:   25 LTVKTHTNISQIQAEEWNSLLRFEDSPFLQHEWFDCLEASGCAVPATGWNPCHLTIRMVTGRGGEVAESDDPGELVAAAPVYIKTHSMGEFIFDNEWASAAYRSGLDYYPKVLVAVPFTPASGARLLLKRGLSQPMQREIRRMVGGFLQDLAKSNGFSSVHVNFCEEEEIGALQEAQPPYLHRTSMQFHWVNRNKDKDGLPYSSFDEYLSAFRSKRRIKIKKERRSIYEDAGLTLQVLRGRDIPDSYFDSDLIFKLYVSTIDKL-FYGRQYLNEAFFRLL-KDKFREPLCLVLAR--DAGGE-----VVAGTFNVISNDKRFYGRYWGCVAPEDIKNLHFETCYYKSIEYCIEAGLAAMEPGAGNSDFKFMRGF 389
            L  + H++IS I  + W++      SPFL+H W  CLE S CA  +TGW P H++IR+  G+           +LV   P+YIK HS+GEF+FD  WA AAYR+ +DYYPK+L  +PFTPA+G R+L    + +    E   + GG  Q   K         +  E     +L+  +  Y+ RTS+Q+HW NRN +   +PY SFD+YL AF+SKRRI I++ER S+ ED G+ +  + G +I         +F +Y++TI K+ F+GRQYL   FF LL +  F + LC + AR    G E     V AGT N++  D  FYGRYWGC+    IKNLHFE CY+ +I++CI+ GL  MEPGAG  D+K+ RGF
Sbjct:    2 LHFELHSSISSISEDTWDAC--HSSSPFLKHSWIRCLEESNCASRSTGWVPQHVSIRI--GK-----------QLVGYVPLYIKEHSLGEFVFDQSWAEAAYRNRIDYYPKLLSGIPFTPATGDRILWMPSVDE----EATALAGGLDQVDTKLKSLPRSMQSLLE-----SLKGVKDDYIRRTSLQYHWCNRNPNNSNMPYDSFDDYLRAFKSKRRIAIQRERSSVREDQGIRIDTVSGEEIRRHPGLVARMFDIYLATIQKMSFWGRQYLTLEFFELLVRSDFCKHLCFICARHNSTGAELKAEDVFAGTINIVM-DGIFYGRYWGCLTEHLIKNLHFEVCYWSAIDFCIKNGLTRMEPGAGGGDYKWARGF 350          
The following BLAST results are available for this feature:
BLAST of EWM25836.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107703|gb|EWM25836.1|0.000e+0100.00Protein of unknown function DUF482 [Nannochloropsi... [more]
gi|553195260|ref|XP_005856114.1|0.000e+0100.00hypothetical protein NGA_0333410 [Nannochloropsis ... [more]
gi|553181898|ref|XP_005853640.1|0.000e+0100.00hypothetical protein NGA_0333420, partial [Nannoch... [more]
gi|873231779|emb|CEM07672.1|2.951e-12749.16unnamed protein product [Vitrella brassicaformis C... [more]
gi|1210519362|dbj|GAX21746.1|7.454e-12242.77uncharacterized protein FisN_31Lh032 [Fistulifera ... [more]
gi|545704412|ref|XP_005704529.1|2.994e-10240.10hypothetical protein Gasu_45090 [Galdieria sulphur... [more]
gi|1084671528|gb|OGP19300.1|1.267e-10142.54hypothetical protein A2038_02870 [Deltaproteobacte... [more]
gi|1084818482|gb|OGQ53132.1|2.500e-9741.61hypothetical protein A2W66_00100 [Deltaproteobacte... [more]
gi|1084851476|gb|OGQ82534.1|3.585e-9741.90hypothetical protein A3F90_16000 [Deltaproteobacte... [more]
gi|219122087|ref|XP_002181385.1|4.260e-9542.78predicted protein, partial [Phaeodactylum tricornu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4848rna4848Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications