EWM25795.1, cds4830 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25795.1 vs. NCBI_GenBank
Match: gi|553195196|ref|XP_005856098.1| (hypothetical protein NGA_0331800 [Nannochloropsis gaditana CCMP526] >gi|422292933|gb|EKU20234.1| hypothetical protein NGA_0331800 [Nannochloropsis gaditana CCMP526] >gi|585107662|gb|EWM25795.1| trna-dihydrouridine synthase a [Nannochloropsis gaditana]) HSP 1 Score: 896.73 bits (2316), Expect = 0.000e+0 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0
Query: 1 MCGSIPQTKRSRSPNLIVIKTASIFTFIAVMTGAPGAARSTAAFVQHHGRMSKNWRMSRSVARTMTSSSTRGRGASQEDGGSEGPDERVSLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPEQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSQGKIPVTVKCRIGVDDDDSYEQLARFVETVSGASPVRHFLVHARKAILGGLSPDQNRKVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLREGVHGVMIGRAVVARPFYWSDVDARVFGSADGNPGLTRREVLDRYGAYAQEEEARGGPRMRRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVPPGSAAIPAPEAVRH 437
MCGSIPQTKRSRSPNLIVIKTASIFTFIAVMTGAPGAARSTAAFVQHHGRMSKNWRMSRSVARTMTSSSTRGRGASQEDGGSEGPDERVSLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPEQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSQGKIPVTVKCRIGVDDDDSYEQLARFVETVSGASPVRHFLVHARKAILGGLSPDQNRKVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLREGVHGVMIGRAVVARPFYWSDVDARVFGSADGNPGLTRREVLDRYGAYAQEEEARGGPRMRRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVPPGSAAIPAPEAVRH
Sbjct: 1 MCGSIPQTKRSRSPNLIVIKTASIFTFIAVMTGAPGAARSTAAFVQHHGRMSKNWRMSRSVARTMTSSSTRGRGASQEDGGSEGPDERVSLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPEQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSQGKIPVTVKCRIGVDDDDSYEQLARFVETVSGASPVRHFLVHARKAILGGLSPDQNRKVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLREGVHGVMIGRAVVARPFYWSDVDARVFGSADGNPGLTRREVLDRYGAYAQEEEARGGPRMRRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVPPGSAAIPAPEAVRH 437
BLAST of EWM25795.1 vs. NCBI_GenBank
Match: gi|298708539|emb|CBJ49172.1| (FAD binding / catalytic/ tRNA dihydrouridine synthase [Ectocarpus siliculosus]) HSP 1 Score: 397.512 bits (1020), Expect = 5.682e-132 Identity = 208/426 (48.83%), Postives = 274/426 (64.32%), Query Frame = 0
Query: 16 LIVIKTASIFTFIAVMTGAPGAARSTAAFVQHHGRMSKNWRMSRS---VARTMTSSSTRGRGASQEDGGSEGPD----------ERVSLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPEQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSQGKIPVTVKCRIGVDDDDSYEQLARFVETVSGASPVRHFLVHARKAILGGLSPDQNRKVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLREGVHGVMIGRAVVARPFYWSDVDARVFGSADGNPGLTRREVLDRYGAYAQEEEARGGPRM---RRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVPPG 425
++ +K+ S+ + V + A A QH G ++ R + + V T GR E G + PD E SLAPMMEYTDRH+R+LLRLL+ R VL+TEM+ + T+ HN + RFL +N EHPVVLQ+GGSD + EA RLA PYKY+A+NLNCGCPSE+V+GKG FGAALMR P V +LC AM +G+ P+TVKCRIGVD+DDSYEQLA FVE VS + V HF+VHARKAILGGLSP QNR +PPLKY FVYRL ++FP + FTLNGGV +YE+ L +G HGVM+GR+ + P+YWS D+ +FG+ D PGLTRREVL+RY Y + +E G + RR L KP+ ++F GE GK+FR L + +L ++++++ MP ++ PG
Sbjct: 1 MMKLKSMSLSALVVVHSAR---AFPLAIPSQHQGLRARRCRHTAAAPPVDHWETDGKKHGRRTRMEAGAA--PDSPPSALGRGREVFSLAPMMEYTDRHMRYLLRLLTTRTVLWTEMVPSSTIIHNPDDLGRFLDYNEEVEHPVVLQIGGSDTTDVREACRLARPYKYDAINLNCGCPSEKVAGKGAFGAALMRSPSLVKDLCLAMKDGAGEDTPITVKCRIGVDNDDSYEQLAAFVEEVSRGAGVPHFIVHARKAILGGLSPAQNRNIPPLKYDFVYRLVKDFPDVDFTLNGGVNTYEEAVSCLEQGAHGVMVGRSWSSNPWYWSQADSMLFGAKD--PGLTRREVLERYAEYGERQEKACGEKWLACRRRLAKPIWHMFHGEKGGKKFRVAL-EGMLREDKSFGEIVQKSLLAMPQDQVDWLPG 418
BLAST of EWM25795.1 vs. NCBI_GenBank
Match: gi|873237112|emb|CEL98082.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 363.614 bits (932), Expect = 6.876e-120 Identity = 194/361 (53.74%), Postives = 243/361 (67.31%), Query Frame = 0
Query: 84 GPDERVSLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHN------EESRD----RFLRFNSPA-EHPVVLQLGGSDPEQLAEASRLASPYK-YNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSQGKIPVTVKCRIGVDDDDSYEQLARFVETVSGASPVRHFLVHARKAILGGLSPDQNRKVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLRE--GVHGVMIGRAVVARPFYWSDVDARVFGSADGNPGLTRREVLDRYGAYAQEEEARGGP----RMRRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVPPGS 426
G R S+APMM+YTD+H RFL+RLL++ LYTEM+ A LY+ + + D R L N+ + E P VLQLGGSDP+ LAEASR+AS Y + MNLNCGCPSERV+GKG FGAALMREP VAELC AM +G G P TVKCRIGVDD DS+E+L RF+ TV+ + V HF++H+RKAIL GLSP+QNRK+PPL Y +VYRL FP LRFTLNGGVL+YED+ H + GVM+GRAV+ RPFYWS+VD+R+ G NPGL RREVL YG+Y E R P +R LL+K NLFAGEPM ++++ ++ + V +L A + +LE PGS
Sbjct: 12 GDMHRFSVAPMMDYTDKHFRFLMRLLTRNATLYTEMVAANALYYTNRHAAADATADSMIPRSLATNAESIESPCVLQLGGSDPDVLAEASRMASTYHPFTEMNLNCGCPSERVAGKGAFGAALMREPALVAELCKAMRQG--GGRPTTVKCRIGVDDHDSFEELQRFIATVAERAHVSHFIIHSRKAILSGLSPEQNRKIPPLIYEYVYRLVEGFPGLRFTLNGGVLTYEDIDTHFERCPTLTGVMVGRAVLDRPFYWSEVDSRLHGR--DNPGLNRREVLAAYGSYCDAEMERTDPSRQRSLRNLLLKHALNLFAGEPMSRKYKQRVEALRQRGDVSVSAILSEAGEQLHEGVLERRPGS 368
BLAST of EWM25795.1 vs. NCBI_GenBank
Match: gi|873237097|emb|CEL98066.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 357.836 bits (917), Expect = 1.703e-117 Identity = 192/365 (52.60%), Postives = 243/365 (66.58%), Query Frame = 0
Query: 88 RVSLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHN------EESRD----RFLRFNSPA-EHPVVLQLGGSDPEQLAEASRLASPYK-YNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSQGKIPVTVKCRIGVDDDDSYEQLARFVETVSGASPVRHFLVHARKAILGGLSPDQNRKVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLRE--GVHGVMIGRAVVARPFYWSDVDARVFGSADGNPGLTRREVLDRYGAYAQEEEARGGP----RMRRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVPPGSAAIPAPEA 434
R S+APMM+YTD+H RFL+RLL++ LYTEM+ A L++ + + D R L N+ + E P VLQLGGSDP+ LAEASR AS Y + +NLNCGCPSERV+GKG FGAALMREP VAELC AM +G G P TVKCRIGVDD DS+E+L RF+ TV+ + V HF++H+RKAIL GLSP+QNRK+PPL Y +VYRL FP LRFTLNGGVL+YED+ H + GVM+GRAV+ RPFYWS+VD+R++G N GL RREVL YG+Y E R P +R LL+K NLFAGEPM ++++ L+ + V +L A + +LE PGS A +
Sbjct: 20 RFSVAPMMDYTDKHFRFLMRLLTRNATLYTEMMAANALHYTNRQAAADATADSMIPRSLATNAESIESPCVLQLGGSDPDVLAEASRTASAYHPFTELNLNCGCPSERVAGKGAFGAALMREPALVAELCKAMRQG--GGRPTTVKCRIGVDDQDSFEELQRFISTVAERAGVSHFIIHSRKAILTGLSPEQNRKIPPLIYEYVYRLVEGFPGLRFTLNGGVLTYEDIDMHFERCPTLTGVMVGRAVLDRPFYWSEVDSRLYGR--DNLGLNRREVLAAYGSYCDAEMERTDPSRQRSLRNLLLKHALNLFAGEPMSRKYKQRLEALRQRGDVSVSAILREAEEQLHEGVLERRPGSGGQVAADC 380
BLAST of EWM25795.1 vs. NCBI_GenBank
Match: gi|168068461|ref|XP_001786082.1| (predicted protein [Physcomitrella patens] >gi|162662169|gb|EDQ49105.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 345.895 bits (886), Expect = 1.065e-112 Identity = 180/342 (52.63%), Postives = 237/342 (69.30%), Query Frame = 0
Query: 88 RVSLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPEQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSQGKIPVTVKCRIGVDDDDSYEQLARFVETVSGASPVRHFLVHARKAILGGLSPDQNRKVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLREGVHGVMIGRAVVARPFYWS---DVDARVFGSADGNPGLTRREVLDRYGAYAQEEEARGGPRM--RRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVPP 424
R S+APMM++TD H R L RL+SK LYTEM+ A T+ H +++ D+FL+FN +HP+VLQLGGSDPE+L +AS LAS Y+Y+ +NLNCGCPSE+V+G GCFGA+LM E VAE A++EGS G PVTVKCRIGVDD DSY+ L +FV TVS +SP +HF+VHARKAIL GLSP NR +PPLKY +VY L R+FP+L+FTLNGGV++ V E L+EGV GVM+GRA P W+ +VD V+G D P LTRR++L++Y YA E + GP+ R L+KP+ +F E +R +D +L V +L+ V+P +L+ PP
Sbjct: 25 RFSVAPMMDWTDNHYRTLARLMSKHAWLYTEMVVADTIIHQQDNLDKFLKFNE-VQHPIVLQLGGSDPEKLLKASLLASVYEYDEINLNCGCPSEKVAGHGCFGASLMLESGLVAECMAAIAEGSPGT-PVTVKCRIGVDDFDSYDLLHKFVTTVSSSSPTQHFVVHARKAILKGLSPAANRTIPPLKYEYVYALIRDFPNLKFTLNGGVVNTHQVNEALQEGVFGVMLGRAAYNYP--WATLGNVDNSVYG--DSTPRLTRRQILEKYVEYADAELHKYGPKKPSVRHLVKPLLGIFHAESGAGVWRRAVDNSLRNAE-TVGALLKETLCVLPDFVLDSPP 359
BLAST of EWM25795.1 vs. NCBI_GenBank
Match: gi|546315194|ref|XP_005715794.1| (unnamed protein product [Chondrus crispus] >gi|507112288|emb|CDF35975.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 345.125 bits (884), Expect = 3.039e-111 Identity = 183/349 (52.44%), Postives = 237/349 (67.91%), Query Frame = 0
Query: 88 RVSLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRF-----NSPAEHPVVLQLGGSDPEQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSQGKIPVTVKCRIGVDDDDSYEQLARFVETVSGASPVRHFLVHARKAILGGLSPDQNRKVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLREGVHGVMIGRAVVARPFY-WSDVDARVFG---SADGNPGLTRREVLDRYGAYAQEEEARGGPRMRRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVPPGSA 427
R S+APMME TDRH R L RL+S+ VLYTEM+ TL +NE+ R+ LR +S ++HPVVLQLGGS P++L A+R+A+ Y Y+ +NLNCGCPS +V+GKGCFGAALMR PE VAE M+ PVTVKCRIGVDD DSY+ L FVE V V+HF++HARKAILGGLSP QNR VPPLKY +V+RL ++FP + FT+NGG + V E L GVHGVM+GR V+ +P++ DVD FG + D LTRR VL Y AYA+ E R G + R ++KP+ LF GEP GK +R +D+ L +P+L V ++ RA++V+ +L+ PP SA
Sbjct: 117 RYSVAPMMEVTDRHFRTLSRLISRDAVLYTEMVVDRTLIYNEQLREYALRIPPLPNSSSSQHPVVLQLGGSVPDELEAAARIAAKYGYSEVNLNCGCPSPKVAGKGCFGAALMRAPEVVAEATKKMAAVLPETTPVTVKCRIGVDDLDSYDFLRNFVEIVHQRGGVKHFIIHARKAILGGLSPAQNRSVPPLKYGYVHRLLQDFPDVTFTINGGFKTLSAVQEQLDVGVHGVMVGREVMDKPWHALCDVDRLFFGRNCTPDDGTILTRRGVLRDYTAYAENEIERTGCSI-RAVVKPLLQLFHGEPNGKIYRRAIDECLRDPALSVGDIINRASSVLSDDVLDAPPPSA 464
BLAST of EWM25795.1 vs. NCBI_GenBank
Match: gi|923667267|ref|XP_013649454.1| (PREDICTED: tRNA-dihydrouridine(20/20a) synthase-like [Brassica napus] >gi|674936890|emb|CDX96309.1| BnaA07g29200D [Brassica napus]) HSP 1 Score: 325.094 bits (832), Expect = 1.895e-104 Identity = 167/340 (49.12%), Postives = 224/340 (65.88%), Query Frame = 0
Query: 90 SLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPEQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSQGKIPVTVKCRIGVDDDDSYEQLARFVETVSGASPVRHFLVHARKAILGGLSPDQNRKVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLREGVHGVMIGRAVVARPFYWSD---VDARVFGSADGNPGLTRREVLDRYGAYAQE---EEARGGPRMRRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVP 423
S+APMME+TD H R L R+++K LYTEMI A TL H + + DRFL F SP +HP+VLQLGGS+ E LA+A++L+ PY Y+ +NLNCGCPS +V+G GCFG +LM P+ V E +A+++ + +PVTVKCRIGVDD DSY++L FV VS SP RHF+VH+RKA+LGG+SP NR++PPLKY + Y L R+FP LRFT+NGG+ S V LREG +GVM+GRA P W VD V+G GLTRR+VL++Y YA + G P +R L+KP+ N+F E ++ D A E V +LE + +P ++L+ P
Sbjct: 50 SVAPMMEWTDNHYRMLARIITKHAWLYTEMIAAQTLVHQQTNLDRFLAF-SPQQHPIVLQLGGSNVESLAKAAKLSHPYGYDEINLNCGCPSPKVAGHGCFGVSLMLNPKLVGEAMSAIADNTN--VPVTVKCRIGVDDHDSYDELCDFVYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYYYALVRDFPDLRFTINGGITSISKVNAALREGAYGVMVGRAAYNNP--WQTLGLVDTAVYGVPSS--GLTRRQVLEQYQVYADSVLGTQGNGRPNVRD-LVKPLLNIFHSENGNSLWKRKADAAFKE-CKTVGSLLEESLKAIPDSVLDSP 380
BLAST of EWM25795.1 vs. NCBI_GenBank
Match: gi|685337154|ref|XP_009105787.1| (PREDICTED: uncharacterized protein LOC103831645 isoform X2 [Brassica rapa]) HSP 1 Score: 323.553 bits (828), Expect = 3.445e-104 Identity = 166/339 (48.97%), Postives = 223/339 (65.78%), Query Frame = 0
Query: 91 LAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPEQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSQGKIPVTVKCRIGVDDDDSYEQLARFVETVSGASPVRHFLVHARKAILGGLSPDQNRKVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLREGVHGVMIGRAVVARPFYWSD---VDARVFGSADGNPGLTRREVLDRYGAYAQE---EEARGGPRMRRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVP 423
+APMME+TD H R L R+++K LYTEMI A TL H + + DRFL F SP +HP+VLQLGGS+ E LA+A++L+ PY Y+ +NLNCGCPS +V+G GCFG +LM P+ V E +A+++ + +PVTVKCRIGVDD DSY++L FV VS SP RHF+VH+RKA+LGG+SP NR++PPLKY + Y L R+FP LRFT+NGG+ S V LREG +GVM+GRA P W VD V+G GLTRR+VL++Y YA + G P +R L+KP+ N+F E ++ D A E V +LE + +P ++L+ P
Sbjct: 18 VAPMMEWTDNHYRTLARIITKHAWLYTEMIAAQTLVHQQTNLDRFLAF-SPQQHPIVLQLGGSNVESLAKAAKLSHPYGYDEINLNCGCPSPKVAGHGCFGVSLMLNPKLVGEAMSAIADNTN--VPVTVKCRIGVDDHDSYDELCDFVYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYYYALVRDFPDLRFTINGGITSISKVNAALREGAYGVMVGRAAYNNP--WQTLGLVDTAVYGVPSS--GLTRRQVLEQYQVYADSVLGTQGNGRPNVRD-LVKPLLNIFHSENENSLWKRKADAAFKECK-TVGSLLEESLKAIPDSVLDSP 347
BLAST of EWM25795.1 vs. NCBI_GenBank
Match: gi|685337152|ref|XP_009105786.1| (PREDICTED: uncharacterized protein LOC103831645 isoform X1 [Brassica rapa]) HSP 1 Score: 323.939 bits (829), Expect = 5.760e-104 Identity = 167/340 (49.12%), Postives = 224/340 (65.88%), Query Frame = 0
Query: 90 SLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPEQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSQGKIPVTVKCRIGVDDDDSYEQLARFVETVSGASPVRHFLVHARKAILGGLSPDQNRKVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLREGVHGVMIGRAVVARPFYWSD---VDARVFGSADGNPGLTRREVLDRYGAYAQE---EEARGGPRMRRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVP 423
S+APMME+TD H R L R+++K LYTEMI A TL H + + DRFL F SP +HP+VLQLGGS+ E LA+A++L+ PY Y+ +NLNCGCPS +V+G GCFG +LM P+ V E +A+++ + +PVTVKCRIGVDD DSY++L FV VS SP RHF+VH+RKA+LGG+SP NR++PPLKY + Y L R+FP LRFT+NGG+ S V LREG +GVM+GRA P W VD V+G GLTRR+VL++Y YA + G P +R L+KP+ N+F E ++ D A E V +LE + +P ++L+ P
Sbjct: 53 SVAPMMEWTDNHYRTLARIITKHAWLYTEMIAAQTLVHQQTNLDRFLAF-SPQQHPIVLQLGGSNVESLAKAAKLSHPYGYDEINLNCGCPSPKVAGHGCFGVSLMLNPKLVGEAMSAIADNTN--VPVTVKCRIGVDDHDSYDELCDFVYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYYYALVRDFPDLRFTINGGITSISKVNAALREGAYGVMVGRAAYNNP--WQTLGLVDTAVYGVPSS--GLTRRQVLEQYQVYADSVLGTQGNGRPNVRD-LVKPLLNIFHSENENSLWKRKADAAFKE-CKTVGSLLEESLKAIPDSVLDSP 383
BLAST of EWM25795.1 vs. NCBI_GenBank
Match: gi|1073006189|ref|XP_018454243.1| (PREDICTED: uncharacterized protein LOC108825454 isoform X2 [Raphanus sativus]) HSP 1 Score: 323.168 bits (827), Expect = 1.286e-103 Identity = 166/340 (48.82%), Postives = 223/340 (65.59%), Query Frame = 0
Query: 90 SLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPEQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSQGKIPVTVKCRIGVDDDDSYEQLARFVETVSGASPVRHFLVHARKAILGGLSPDQNRKVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLREGVHGVMIGRAVVARPFYWSD---VDARVFGSADGNPGLTRREVLDRYGAYAQE---EEARGGPRMRRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVP 423
S+APMME+TD H R L R+++K LYTEMI A TL H + + DRFL F SP +HP+VLQLGGS+ E LA+A++L+ PY Y+ +NLNCGCPS +V+G GCFG LM P+ V E +A+++ + +PVTVKCRIGVDD DSY++L FV VS SP RHF+VH+RKA+LGG+SP NR++PPLKY + Y L R+FP L+FT+NGG+ S V LREG HGVM+GRA P W VD ++G GLTRR+VL++Y YA + G P +R L+KP+ N+F E ++ D A E V +LE + +P ++L+ P
Sbjct: 51 SVAPMMEWTDNHYRTLARIITKHAWLYTEMIAAQTLIHQQTNLDRFLAF-SPQQHPIVLQLGGSNVESLAKAAKLSHPYGYDEINLNCGCPSPKVAGHGCFGVTLMLNPKLVGEAMSAIADNTN--VPVTVKCRIGVDDHDSYDELCDFVYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYYYALVRDFPDLKFTINGGITSVSKVNAALREGAHGVMVGRAAYNNP--WQTLGLVDTALYGVPSS--GLTRRQVLEQYQVYADSVLGTQGNGRPNVRD-LVKPLLNIFHSENGNSLWKRRADAAFKE-CKTVGSLLEESLKAVPDSVLDSP 381 The following BLAST results are available for this feature:
BLAST of EWM25795.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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