EWM25801.1, cds4826 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25801.1 vs. NCBI_GenBank
Match: gi|585107668|gb|EWM25801.1| (peroxisomal biogenesis factor 3 [Nannochloropsis gaditana]) HSP 1 Score: 902.123 bits (2330), Expect = 0.000e+0 Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0
Query: 1 MGRLQQVYHFLKRNRRAIGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDRCRLLSLVYEHFLGEGLRRLKEAVEVAVREELGAWSVHAKIHVDYAELHDALMRIRRRLEGPRGVLLAESPLLQYVLDAASQAEDLGPPGSRLHEMVNETWDAFESPSFKLAVEDCLDVTFRVFLEDLFRSLYASPPSASRSARPGADEKERPLGEGIGEGPVAERSTEEEGSEEARDSDADRAGAEESKPLDPPLAKLIPHMKNAATKVFNGDPQNNEYIRITAQNRSVNLLCSSFFTIETSFD 440
MGRLQQVYHFLKRNRRAIGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDRCRLLSLVYEHFLGEGLRRLKEAVEVAVREELGAWSVHAKIHVDYAELHDALMRIRRRLEGPRGVLLAESPLLQYVLDAASQAEDLGPPGSRLHEMVNETWDAFESPSFKLAVEDCLDVTFRVFLEDLFRSLYASPPSASRSARPGADEKERPLGEGIGEGPVAERSTEEEGSEEARDSDADRAGAEESKPLDPPLAKLIPHMKNAATKVFNGDPQNNEYIRITAQNRSVNLLCSSFFTIETSFD
Sbjct: 1 MGRLQQVYHFLKRNRRAIGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDRCRLLSLVYEHFLGEGLRRLKEAVEVAVREELGAWSVHAKIHVDYAELHDALMRIRRRLEGPRGVLLAESPLLQYVLDAASQAEDLGPPGSRLHEMVNETWDAFESPSFKLAVEDCLDVTFRVFLEDLFRSLYASPPSASRSARPGADEKERPLGEGIGEGPVAERSTEEEGSEEARDSDADRAGAEESKPLDPPLAKLIPHMKNAATKVFNGDPQNNEYIRITAQNRSVNLLCSSFFTIETSFD 440
BLAST of EWM25801.1 vs. NCBI_GenBank
Match: gi|553195242|ref|XP_005856109.1| (peroxin-3 [Nannochloropsis gaditana CCMP526] >gi|422292944|gb|EKU20245.1| peroxin-3 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 405.216 bits (1040), Expect = 5.882e-139 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
Query: 1 MGRLQQVYHFLKRNRRAIGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDR 196
MGRLQQVYHFLKRNRRAIGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDR
Sbjct: 1 MGRLQQVYHFLKRNRRAIGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDR 196
BLAST of EWM25801.1 vs. NCBI_GenBank
Match: gi|813178950|ref|XP_012205944.1| (hypothetical protein SPRG_11606 [Saprolegnia parasitica CBS 223.65] >gi|641529102|gb|KDO23291.1| hypothetical protein SPRG_11606 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 98.2117 bits (243), Expect = 7.687e-19 Identity = 106/411 (25.79%), Postives = 161/411 (39.17%), Query Frame = 0
Query: 42 KRIIREHDLARLD-------QHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQ---ALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDRCRLLSLVYEHFLGEGLRRLKEAVEVAVRE--ELGAWSVHAKIHVDYAELHDALMRIRRRLEGPRGVLLAESPLLQYVLDAASQAEDLGPPGSRLHEMVNETWDAFESPSFKLAVEDCLDVTFRVFLEDLFRSLYASPPSASRSARPGADEKERPLGEGIGEGPVAERSTEEEGSEEARDSDADRAGAEESKPLDPPLAKLIPHMKNAATKVFNGDPQNNEYIR---ITAQNRSVNLLCSSFFTIET 437
KR+IRE + LD + RLQMH+ RS+ E A L F+ +L+ R+Y+++D+ V LK L K E + ++W K+ GF R F + F L++++ ++ ILGR F + E GE T S S + + LS E+F GL +L +E + E L W V K V+ A+L D L+R P ++ L L P L ++NE WD ESP FK A+ +D F + D+ +LY P A GP+ E S + PPLAK+IP +K ++F + ++ + ++ L S F ET
Sbjct: 41 KRVIREAETMMLDSQRELVARQRLQMHLGRSQEEIKAAFLRFVPSLKTRLYKLLDLEGIVANLKV----LDKSEREMRDSMWEDAKLLGFGRLFAGLHAFCQLHLLVHCELLILGRETFHKHKTE----------------GE-----------TSSESIDVHVQQQFLSSTLEYFFETGLPKLTAEIESRLSEYPTLQTWRVKEKAQVEKADL-DHLLRELHATCLPCSA--SDHALWHSFLIYPDDVPLEAHPAGVL-PLLNELWDILESPFFKDALRASIDCLFELLTTDILAALY--PHEA---------------------GPITEMSAIQR----------------------PPLAKVIPQLKVEVGRLFVATAKQTTLLQHWETLSGLETLQCLSESIFVQET 371
BLAST of EWM25801.1 vs. NCBI_GenBank
Match: gi|673039205|ref|XP_008873563.1| (hypothetical protein H310_09303 [Aphanomyces invadans] >gi|574470993|gb|ETV98002.1| hypothetical protein H310_09303 [Aphanomyces invadans]) HSP 1 Score: 92.0485 bits (227), Expect = 1.135e-16 Identity = 66/231 (28.57%), Postives = 113/231 (48.92%), Query Frame = 0
Query: 19 GLIAGASAAGFAAWRIKRVLDDYKRIIREHDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDRCRLLSLVYEHFLGEGLRRLKEAVEVAVR--EELGAWSVHAKIHVDYAELHDAL 247
G++ SA + + ++RV+++ + + ++ +Q RL +H+ R+ EC A L F+ +++ R+Y+ +D+ V++LK K LW K+ GF+R + + Y + L V+L ++ I+GR F+ + AA ++ +G+ E DA T F LS ++F GL +L EAVEV + EL +W VH K V ELH L
Sbjct: 27 GVVVACSAGAY--YMVRRVVNEAENMTKDIQRQIAEQQRLGVHLRRTEEECKAAFLRFLPSMKTRIYKQLDLEHIVESLKVLDKN-EKDTRDMLWDDAKLIGFTRLYASVYAYCSLQVLLHCELLIMGRETFDKA------AAHANELDGKEDDIE-----DAKDTLTRQHQF--------LSSTMDYFFTTGLPKLIEAVEVHIHGNAELHSWRVHEKRQVQADELHALL 235
BLAST of EWM25801.1 vs. NCBI_GenBank
Match: gi|953500907|emb|CEG37940.1| (peroxisomal biogenesis factor 3 [Plasmopara halstedii]) HSP 1 Score: 91.2781 bits (225), Expect = 1.832e-16 Identity = 100/406 (24.63%), Postives = 170/406 (41.87%), Query Frame = 0
Query: 10 FLKRNRRA-IGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDRCRLLSLVYEHFLGEGLRRLKEAVEVAVRE--ELGAWSVHAKIHVDYAELHDALMRIRRRLEGPRGVLLA------ESPLLQYVLDAASQAEDLGPPGSRLHEMVNETWDAFESPSFKLAVEDCLDVTFRVFLEDLFRSLYASPPSASRSARPGADEKERPLGEGIGEGPVAERSTEEEGSEEARDSDADRAGAEESKPLDPPLAKLIPHMKNAATKVF 406
F+ R+++ I G + AG A + KR+ + +R ++ + + RLQ+ + + E + F+ L+ R+Y+++D+ S V+ LK K+ ALW K+ F+R+ + F L ++++ QV I+G+ FE + + + Q+ +EE + + + A +S E+FL E L R+K VE V+E EL AW V K V EL++ L + + P V +A +S L+ E L L ++N+ WD ES F A++ L +DL +Y GP R++E + D + A+ KP PPLAKLIP ++ K+
Sbjct: 15 FIHRHKKLLIATTIGTACAGTAFYAYKRIQSEAERFNQQIQMQMAEHQRLQLALNSTVDESRAMVKRFLPRLKSRLYQLLDLESVVQELKM-LDKTQKKRRNALWEDAKLLAFTRYMTSLIAFGLWHMLVFAQVSIIGKRMFEKNLKMEVSERQKQREEAE----------EQAHHAFLTSGL-------------EYFLDEALERIKNHVETIVKENKELQAWKVSQKAAVTTNELNEVLQTLFLDI-LPSTVAVAAAEKHEDSAELRKWRGFLVYPEKLQGQDENLISLLNDLWDLLESNLFLPALQHSLGFLCGNAFQDLDDVVY---------------------------GP---RNSEPQ--------DVENHDAKPEKP-APPLAKLIPCLQAEMNKLL 356
BLAST of EWM25801.1 vs. NCBI_GenBank
Match: gi|1173928156|gb|OQR81832.1| (hypothetical protein THRCLA_11363, partial [Thraustotheca clavata]) HSP 1 Score: 90.5077 bits (223), Expect = 3.077e-16 Identity = 72/279 (25.81%), Postives = 119/279 (42.65%), Query Frame = 0
Query: 55 QHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDRCRLLSLVYEHFLGEGLRRLKEAVE--VAVREELGAWSVHAKIHVDYAELHDALMRIRRR-LEGPRGVLLAESPLLQY--VLDAASQAEDLGPPGSRLHEMVNETWDAFESPSFKLAVEDCLDVTFRVFLEDLFRSLY 328
+ RLQ+H+ RS+ EC A + F+ +++ R+Y+ +D+ V +LK K+ LW K+ F+R F + + F LL +++ ++ ILGR +E R E P E ++ ++T E+F GL L E + +A L W V K V EL D L +++ L L Y + +A E + P ++NE WD F+ P F+ +E C++ F + D+ SLY
Sbjct: 61 RQRLQIHLTRSKDECKNAFMRFVPSMKTRLYKRLDLEGVVASLKVLDKS-DKEMRDTLWEDAKLLAFTRLFASIHSFCLLELLVHCELLILGRKTYE-----------RSTAEKSDPESEDMTVQQQFMSST-----------------MEYFFETGLPNLTEELSGRIANHVTLQEWRVSEKGQVSKKELEDLLDNLQKTCLPSTEEDFKKWQSFLIYPDSIPSAKHPEGVLP-------LLNELWDIFDLPLFQNTLEACINKLFELVSVDILHSLY 303
BLAST of EWM25801.1 vs. NCBI_GenBank
Match: gi|410915951|ref|XP_003971450.1| (PREDICTED: peroxisomal biogenesis factor 3 [Takifugu rubripes]) HSP 1 Score: 89.7373 bits (221), Expect = 4.323e-16 Identity = 86/332 (25.90%), Postives = 146/332 (43.98%), Query Frame = 0
Query: 7 VYHFLKRNRRAIGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLAR-LDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDRCRLLSLVYEHFLGEGLRRLKEAVEVAVREELGAWSVHAKIHVDYAELHDALMRIRRRLEGPRGVLLAESPLLQYVL-----DAASQAEDLGPPGSRLHEMVNETWDAFESPSFKLAVEDCLDVTFRVFLEDLFRSLYASPP 332
V++F+KR+RR + GA+ G + + + R ++E + A L Q R +H ++ C +L+ + L+ + ++ S LK + +W +K+ F+R + Y +L V+LRVQ++I+G Y + L GQ PR D + + LS + +H LG+GL L AV+ AVR LG S+ + +L+ + ++L R V+ + SPL +Y+L A QA L + +M+NET D +SP F + CL+ F L++L + PP
Sbjct: 5 VWNFVKRHRRKF-IFTGAAVGG--VYFLGKYAQKKLREMQEREAAEYLAQARRHIHFESNQRTCNMTVLSMLPALKDAIVSQLNSESLTMLLKT-----RPANKLEIWEDLKIISFTRTIVGVYSTCMLVVLLRVQLNIIGGYLY-------LDLDTSAGHPGQTPRAP------------------PDVQHQYLSSI-QHLLGDGLAELMTAVKGAVRRSLGGISLKQNL---------SLVELEQQLSWVRAVVESASPLSRYILADDENALAEQACGLTEEDTVTIKMLNETRDMLDSPDFSTVLNACLNRGFSRLLDNL-AEFFRPPP 292
BLAST of EWM25801.1 vs. NCBI_GenBank
Match: gi|260829353|ref|XP_002609626.1| (hypothetical protein BRAFLDRAFT_125038 [Branchiostoma floridae] >gi|229294988|gb|EEN65636.1| hypothetical protein BRAFLDRAFT_125038 [Branchiostoma floridae]) HSP 1 Score: 88.1965 bits (217), Expect = 1.823e-15 Identity = 81/323 (25.08%), Postives = 156/323 (48.30%), Query Frame = 0
Query: 7 VYHFLKRNRRAIGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLA-RLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDRCRLLSLVYEHFLGEGLRRLKEAVEVAVREELGAWSVHAKIHVDYAELHDALMRIRRRLE-GPR------GVLLAESPLLQYVL-----DAASQAEDLGPPGSRLHEMVNETWDAFESPSFKLAVEDCLDVTF 316
V++F+KR+++ + + AG G A + + + R ++E ++A +L+ R + H ++ C +L+ + +LR+ + + ++ V LK+ + LW +K+ F+R +A YG +L V+LRVQ++I+G Y + S +L +E Q PR + + R L+ + ++ LG+GL L AV+E +G+ S+ ++ ++ E+H A+ ++RR +E P G + S L +Y+L + QA L L ++++ET D ES F+ + CL+ +F
Sbjct: 5 VWNFIKRHKKKL-IFAGVVVGG--AVFLGKYAETKLRELQEKEMAEQLENARKKHHFDNNQRTCNMTVLSMIPSLRETLMQRINTEELVAKLKS-----KPPNKVELWEDLKIDSFTRVLVALYGTCILVVLLRVQLNIIGGYMYLDS---LLNLNGASKEVVQAPR---------------------EIQERYLASI-QYLLGDGLTLLISDTRQAVQEVIGSLSLRQELSLE--EVHQAVWKVRREVERAPEDGLDITGRSASTSGLTKYMLPEEEEEKLDQASSLSQDDQVLQKLLSETRDMIESIDFQTVLSKCLEASF 292
BLAST of EWM25801.1 vs. NCBI_GenBank
Match: gi|1126210481|ref|XP_019638997.1| (PREDICTED: peroxisomal biogenesis factor 3-like [Branchiostoma belcheri]) HSP 1 Score: 85.8853 bits (211), Expect = 1.238e-14 Identity = 80/323 (24.77%), Postives = 154/323 (47.68%), Query Frame = 0
Query: 7 VYHFLKRNRRAIGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLA-RLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDRCRLLSLVYEHFLGEGLRRLKEAVEVAVREELGAWSVHAKIHVDYAELHDALMRIRRRLE-GPR------GVLLAESPLLQYVL-----DAASQAEDLGPPGSRLHEMVNETWDAFESPSFKLAVEDCLDVTF 316
V+ F+KR+++ + AG G A + + + R ++E ++A +L+ R + H ++ C +L+ + +LR+ + + ++ V LK+ + LW +K+ F+R +A YG +L V+LRVQ++I+G Y + S +L +E Q PR + + R L+ + ++ LG+GL L AV+E +G+ S+ ++ ++ +LH A+ ++RR +E P G + + L +Y+L + QA L L ++++ET D ES F+ + CL+ +F
Sbjct: 5 VWDFIKRHKKKF-IFAGVVVGG--AVFLGKYAETKLRELQEKEMAEQLENARKKHHFDNNQRTCNMTVLSMIPSLRETLMQRINTEELVAKLKS-----KPPNKVELWEDLKIDSFTRVLVALYGTCILVVLLRVQLNIIGGYMYLDS---LLNLNGASKEVVQAPR---------------------EIQERYLASI-QYLLGDGLTLLIRDTRQAVQEVIGSLSLRQELSLE--DLHQAVWKVRREVERAPEDGLDITGRSASTTGLTKYMLPEEEEEKLDQASSLSQDDQVLQKLLSETRDMIESVDFQTVLSTCLEASF 292
BLAST of EWM25801.1 vs. NCBI_GenBank
Match: gi|1195531134|ref|XP_021076824.1| (peroxisomal biogenesis factor 3 isoform X2 [Mus pahari]) HSP 1 Score: 85.5001 bits (210), Expect = 1.308e-14 Identity = 85/334 (25.45%), Postives = 145/334 (43.41%), Query Frame = 0
Query: 4 LQQVYHFLKRNRRAIGLIAGASAAGFAAWRIKRVLDDY--KRI--IREHDLAR-LDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAGYAATGSSSFGSDDRCRLLSLVYEHFLGEGLRRLKEAVEVAVREELGAWSVHAKIHVDYAELHDALMRIRRRLEGPRGVL----LAESPLLQYVLD-----AASQAEDLGPPGSRLHEMVNETWDAFESPSFKLAVEDCLDVTFRVFLEDL 323
L+ ++FLKR+++ + G G +L Y K+I I+E + A + Q R Q H ++ C +L+ + TLR+ + + ++ S LK+ + +W +K+ F+R +A Y +L V+LRVQ++I+G Y + L +A G++ D + +H LG+GL L ++ AV+ LG SV K + +L L IR +E R + +S L QY++ A+QA L P +++NET D ESP F + CL+ F L+++
Sbjct: 2 LRSTWNFLKRHKKKC-IFLGTVLGGVY------ILGKYGQKKIREIQEREAAEYIAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKS-----RPSNKLEIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIY---------------------------LDNATVGKNGTTILAPPDVQQQYLSSIQHLLGDGLTELVTVIKQAVQRILG--SVSLKHSLSLLDLEQKLKEIRILVEQHRSSWNDKDVCKSSLCQYMMPDEETPLAAQAYGLSPRDITTIKLLNETRDMLESPDFSTVLNTCLNRGFSRLLDNM 294 The following BLAST results are available for this feature:
BLAST of EWM25801.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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