EWM25870.1, cds4816 (CDS) Nannochloropsis gaditana

Overview
NameEWM25870.1
Unique Namecds4816
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:458051..458368 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25870.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100054g39.5562.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:458051..458368 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25870.1 vs. NCBI_GenBank
Match: gi|585107738|gb|EWM25870.1| (hypothetical protein Naga_100054g39 [Nannochloropsis gaditana])

HSP 1 Score: 207.994 bits (528), Expect = 5.136e-68
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 
Query:    1 MPTCSRPGGSGIKACSTPARSSGSLLRAKGETVLPASQEVLFPLVAHVLSPGNSLELLSGGCLHLHRRPRIRRLFGIRDHRYGIRDRARLPGERARQTRVYEVGI 105
            MPTCSRPGGSGIKACSTPARSSGSLLRAKGETVLPASQEVLFPLVAHVLSPGNSLELLSGGCLHLHRRPRIRRLFGIRDHRYGIRDRARLPGERARQTRVYEVGI
Sbjct:    1 MPTCSRPGGSGIKACSTPARSSGSLLRAKGETVLPASQEVLFPLVAHVLSPGNSLELLSGGCLHLHRRPRIRRLFGIRDHRYGIRDRARLPGERARQTRVYEVGI 105
The following BLAST results are available for this feature:
BLAST of EWM25870.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107738|gb|EWM25870.1|5.136e-68100.00hypothetical protein Naga_100054g39 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4828rna4828Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications