EWM25874.1, cds4813 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25874.1 vs. NCBI_GenBank
Match: gi|585107742|gb|EWM25874.1| (ubiquitin-like protein 5 [Nannochloropsis gaditana]) HSP 1 Score: 150.214 bits (378), Expect = 4.774e-46 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
Query: 1 MIEVILNDRLGKKIRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITLADYEISEGMSLELYYS 73
MIEVILNDRLGKKIRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITLADYEISEGMSLELYYS
Sbjct: 1 MIEVILNDRLGKKIRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITLADYEISEGMSLELYYS 73
BLAST of EWM25874.1 vs. NCBI_GenBank
Match: gi|760448569|ref|XP_011401353.1| (Ubiquitin-like protein 5 [Auxenochlorella protothecoides] >gi|675355899|gb|KFM28339.1| Ubiquitin-like protein 5 [Auxenochlorella protothecoides]) HSP 1 Score: 141.739 bits (356), Expect = 9.037e-43 Identity = 65/73 (89.04%), Postives = 72/73 (98.63%), Query Frame = 0
Query: 1 MIEVILNDRLGKKIRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITLADYEISEGMSLELYYS 73
MIEV+LNDRLGKK+RVKCNEDDTIGDLKKLVAAQTGTRPEK+RIQKWYTVYKDHITLADYE+ +GM+LELYY+
Sbjct: 1 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKLRIQKWYTVYKDHITLADYEVKDGMNLELYYN 73
BLAST of EWM25874.1 vs. NCBI_GenBank
Match: gi|159478294|ref|XP_001697239.1| (hypothetical protein CHLREDRAFT_150548 [Chlamydomonas reinhardtii] >gi|158274713|gb|EDP00494.1| predicted protein [Chlamydomonas reinhardtii] >gi|1004143665|gb|KXZ51647.1| hypothetical protein GPECTOR_11g101 [Gonium pectorale]) HSP 1 Score: 141.739 bits (356), Expect = 9.867e-43 Identity = 66/73 (90.41%), Postives = 71/73 (97.26%), Query Frame = 0
Query: 1 MIEVILNDRLGKKIRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITLADYEISEGMSLELYYS 73
MIEV+LNDRLGKK+RVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYT+YKDHITLADYEI +GM LELYY+
Sbjct: 1 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTIYKDHITLADYEIHDGMGLELYYN 73
BLAST of EWM25874.1 vs. NCBI_GenBank
Match: gi|926788691|ref|XP_013902819.1| (Ubiquitin-like protein 5 [Monoraphidium neglectum] >gi|761973573|gb|KIZ03800.1| Ubiquitin-like protein 5 [Monoraphidium neglectum]) HSP 1 Score: 140.969 bits (354), Expect = 1.907e-42 Identity = 66/73 (90.41%), Postives = 71/73 (97.26%), Query Frame = 0
Query: 1 MIEVILNDRLGKKIRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITLADYEISEGMSLELYYS 73
MIEVILNDRLGKK+R+KCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITL+DYEI +GM LELYY+
Sbjct: 1 MIEVILNDRLGKKVRIKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITLSDYEIHDGMGLELYYN 73
BLAST of EWM25874.1 vs. NCBI_GenBank
Match: gi|168063618|ref|XP_001783767.1| (predicted protein [Physcomitrella patens] >gi|162664710|gb|EDQ51419.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 140.584 bits (353), Expect = 2.863e-42 Identity = 65/73 (89.04%), Postives = 71/73 (97.26%), Query Frame = 0
Query: 1 MIEVILNDRLGKKIRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITLADYEISEGMSLELYYS 73
MIEV+LNDRLGKK+RVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYT+YKDHITL+DYEI +GM LELYY+
Sbjct: 1 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTIYKDHITLSDYEIHDGMGLELYYN 73
BLAST of EWM25874.1 vs. NCBI_GenBank
Match: gi|545362946|ref|XP_005646670.1| (ubiquitin-like protein [Coccomyxa subellipsoidea C-169] >gi|384248643|gb|EIE22126.1| ubiquitin-like protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 140.584 bits (353), Expect = 3.161e-42 Identity = 66/73 (90.41%), Postives = 70/73 (95.89%), Query Frame = 0
Query: 1 MIEVILNDRLGKKIRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITLADYEISEGMSLELYYS 73
MIEVILNDRLGKK+RVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWY +YKDHITLADYEI +GM LELYY+
Sbjct: 1 MIEVILNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYKDHITLADYEIHDGMGLELYYN 73
BLAST of EWM25874.1 vs. NCBI_GenBank
Match: gi|971508701|dbj|GAQ89500.1| (Ubiquitin-like protein [Klebsormidium nitens]) HSP 1 Score: 140.584 bits (353), Expect = 3.231e-42 Identity = 66/73 (90.41%), Postives = 70/73 (95.89%), Query Frame = 0
Query: 1 MIEVILNDRLGKKIRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITLADYEISEGMSLELYYS 73
MIEVILNDRLGKK+RVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYT+YKDHITL DYEI +GM LELYY+
Sbjct: 1 MIEVILNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTIYKDHITLGDYEIHDGMGLELYYN 73
BLAST of EWM25874.1 vs. NCBI_GenBank
Match: gi|302829811|ref|XP_002946472.1| (hypothetical protein VOLCADRAFT_56004 [Volvox carteri f. nagariensis] >gi|300268218|gb|EFJ52399.1| hypothetical protein VOLCADRAFT_56004 [Volvox carteri f. nagariensis]) HSP 1 Score: 140.198 bits (352), Expect = 3.451e-42 Identity = 65/73 (89.04%), Postives = 71/73 (97.26%), Query Frame = 0
Query: 1 MIEVILNDRLGKKIRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITLADYEISEGMSLELYYS 73
MIEV+LNDRLGKK+RVKCNEDDTIGDLKKLVAAQTGTRP+KIRIQKWYT+YKDHITLADYEI +GM LELYY+
Sbjct: 1 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPDKIRIQKWYTIYKDHITLADYEIHDGMGLELYYN 73
BLAST of EWM25874.1 vs. NCBI_GenBank
Match: gi|255578145|ref|XP_002529942.1| (PREDICTED: ubiquitin-like protein 5 [Ricinus communis] >gi|223530572|gb|EEF32450.1| conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 140.198 bits (352), Expect = 4.206e-42 Identity = 66/73 (90.41%), Postives = 70/73 (95.89%), Query Frame = 0
Query: 1 MIEVILNDRLGKKIRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITLADYEISEGMSLELYYS 73
MIEVILNDRLGKK+RVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYT+YKDHITL DYEI +GM LELYY+
Sbjct: 1 MIEVILNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTIYKDHITLQDYEIHDGMGLELYYN 73
BLAST of EWM25874.1 vs. NCBI_GenBank
Match: gi|357160979|ref|XP_003578938.1| (PREDICTED: ubiquitin-like protein 5 [Brachypodium distachyon] >gi|1149788458|ref|XP_020156054.1| ubiquitin-like protein 5 [Aegilops tauschii subsp. tauschii] >gi|475612009|gb|EMT28275.1| hypothetical protein F775_30675 [Aegilops tauschii] >gi|732811693|gb|AIZ94609.1| HUB1 [Lolium perenne] >gi|741985234|gb|AJA91631.1| ubiquitin-like protein 5 [Triticum aestivum] >gi|944056696|gb|KQJ92334.1| hypothetical protein BRADI_4g42980 [Brachypodium distachyon]) HSP 1 Score: 140.198 bits (352), Expect = 4.694e-42 Identity = 65/73 (89.04%), Postives = 70/73 (95.89%), Query Frame = 0
Query: 1 MIEVILNDRLGKKIRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTVYKDHITLADYEISEGMSLELYYS 73
MIEV+LNDRLGKK+RVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYT+YKDHITL DYEI +GM LELYY+
Sbjct: 1 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTIYKDHITLGDYEIHDGMGLELYYN 73 The following BLAST results are available for this feature:
BLAST of EWM25874.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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