EWM25875.1, cds4810 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25875.1 vs. NCBI_GenBank
Match: gi|585107743|gb|EWM25875.1| (hypothetical protein Naga_100054g32 [Nannochloropsis gaditana]) HSP 1 Score: 348.591 bits (893), Expect = 1.282e-121 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query: 1 MWKRASTMNKAIVVTRCGKLHIFPVFFLTTRRSVSRSIKAFSSSSTSAGQVAPETIQVDFGEATGALFDRIEKGVAGMQELNDFFVVNRQNKVELVIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRMCVGCPEL 166
MWKRASTMNKAIVVTRCGKLHIFPVFFLTTRRSVSRSIKAFSSSSTSAGQVAPETIQVDFGEATGALFDRIEKGVAGMQELNDFFVVNRQNKVELVIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRMCVGCPEL
Sbjct: 1 MWKRASTMNKAIVVTRCGKLHIFPVFFLTTRRSVSRSIKAFSSSSTSAGQVAPETIQVDFGEATGALFDRIEKGVAGMQELNDFFVVNRQNKVELVIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRMCVGCPEL 166
BLAST of EWM25875.1 vs. NCBI_GenBank
Match: gi|553195204|ref|XP_005856100.1| (hypothetical protein NGA_0332000 [Nannochloropsis gaditana CCMP526] >gi|422292935|gb|EKU20236.1| hypothetical protein NGA_0332000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 328.561 bits (841), Expect = 3.176e-113 Identity = 166/204 (81.37%), Postives = 166/204 (81.37%), Query Frame = 0
Query: 1 MWKRASTMNKAIVVTRCGKLHIFPVFFLTTRRSVSRSIKAFSSSSTSAG--------------------------------------QVAPETIQVDFGEATGALFDRIEKGVAGMQELNDFFVVNRQNKVELVIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRMCVGCPEL 166
MWKRASTMNKAIVVTRCGKLHIFPVFFLTTRRSVSRSIKAFSSSSTSAG QVAPETIQVDFGEATGALFDRIEKGVAGMQELNDFFVVNRQNKVELVIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRMCVGCPEL
Sbjct: 1 MWKRASTMNKAIVVTRCGKLHIFPVFFLTTRRSVSRSIKAFSSSSTSAGEQLRWGAIKSKGGTNNAGSGPFGSSAGGDSRFVRRKPGQVAPETIQVDFGEATGALFDRIEKGVAGMQELNDFFVVNRQNKVELVIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRMCVGCPEL 204
BLAST of EWM25875.1 vs. NCBI_GenBank
Match: gi|298708144|emb|CBJ30485.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 76.2554 bits (186), Expect = 7.707e-14 Identity = 41/128 (32.03%), Postives = 71/128 (55.47%), Query Frame = 0
Query: 39 KAFSSSSTSAGQVAPETIQVDFGEATGALFDRIEKGVAGMQELNDFFVVNRQNKVELVIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRMCVGCPEL 166
K S+ + A + E + + +A D++EK + M+ ND F V R+ +E+ +LGP G + ++ D + Q+ +SP SG ++Y +++ RW+ A DKHD G+LTRD+I+ G P+
Sbjct: 110 KNMSAQAQKANKEFGELSREEIRKAGEEEVDKVEKALKAMEPFNDVFEVRREG-LEVFAELGPEVGTYWIKFDLSIYQICLMSPRSGPHRYIFDKGSGRWIGEA-DKHDFQGMLTRDIIQSACGIPDF 235
BLAST of EWM25875.1 vs. NCBI_GenBank
Match: gi|1072224671|gb|OEU09420.1| (hypothetical protein FRACYDRAFT_264140 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 70.8626 bits (172), Expect = 5.900e-12 Identity = 48/130 (36.92%), Postives = 69/130 (53.08%), Query Frame = 0
Query: 42 SSSSTSAGQVAPETIQVDFGEATGALFDRIEKGVAGMQELNDFFVVNRQNKVEL----VIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRM-CVGCPEL 166
+SSST P + +F +A L D++E + M+ NDFF R +K +L IDLGP KG +T++ + Y SPVSG Y +W++I+ D H G+L RDLIR C+G P+L
Sbjct: 100 ASSSTLQRLHDPVSNSKEFCQAASELLDKLEVALEPMKSKNDFFETER-SKGDLGEIYKIDLGPIKGLYTIEISETEHVFEYGSPVSGTYMYCKSSITGQWINIS-DGHHFEGMLVRDLIRSDCLGLPKL 227
BLAST of EWM25875.1 vs. NCBI_GenBank
Match: gi|566029124|gb|ETI52035.1| (hypothetical protein F443_04751, partial [Phytophthora parasitica P1569] >gi|568054852|gb|ETM51625.1| hypothetical protein L914_04587, partial [Phytophthora parasitica]) HSP 1 Score: 66.2402 bits (160), Expect = 6.346e-11 Identity = 38/124 (30.65%), Postives = 61/124 (49.19%), Query Frame = 0
Query: 42 SSSSTSAGQVAPETIQVDFGEATGALFDRIEKGVAGMQE-LNDFFVVNRQNKVELVIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRMCVGCP 164
++ T ++ P+ + F + DR++ V + +ND F + R ELVI F ++ + Q+ +LSPVSG Y++ +RW D HD+ G+LTRDL+R C G P
Sbjct: 9 AAGGTRRRRLKPKLPKDKFTTLSTEFLDRVQAAVEPLHPPINDDFQLQRDGNGELVIRTN--SKEFVIKVLSSKQQIEFLSPVSGLRTYQWNLMTKRW-EDETDSHDIEGLLTRDLMRFCAGIP 129
BLAST of EWM25875.1 vs. NCBI_GenBank
Match: gi|675186461|ref|XP_008902115.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|567966433|gb|ETK91880.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568024426|gb|ETL98461.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568097357|gb|ETN12099.1| hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|570332818|gb|ETO80766.1| hypothetical protein, variant [Phytophthora parasitica P1976] >gi|570992087|gb|ETP49685.1| hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 66.2402 bits (160), Expect = 8.374e-11 Identity = 38/124 (30.65%), Postives = 62/124 (50.00%), Query Frame = 0
Query: 42 SSSSTSAGQVAPETIQVDFGEATGALFDRIEKGVAGMQE-LNDFFVVNRQNKVELVIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRMCVGCP 164
++ T ++ P+ + F + DR++ V + +ND F + R ELVI + F ++ + Q+ +LSPVSG Y++ +RW D HD+ G+LTRDL+R C G P
Sbjct: 30 AAGGTRRRRLKPKLPKDKFTTLSTEFLDRVQAAVEPLHPPINDDFQLQRDGNGELVIRTNSKE--FVIKVLSSKQQIEFLSPVSGLRTYQWNLMTKRW-EDETDSHDIEGLLTRDLMRFCAGIP 150
BLAST of EWM25875.1 vs. NCBI_GenBank
Match: gi|1173936545|gb|OQR87470.1| (hypothetical protein ACHHYP_08818 [Achlya hypogyna]) HSP 1 Score: 64.3142 bits (155), Expect = 3.585e-10 Identity = 40/129 (31.01%), Postives = 56/129 (43.41%), Query Frame = 0
Query: 37 SIKAFSSSSTSAGQVAPETIQVDFGEATGALFDRIEKGVAGMQ-ELNDFFVVNRQNKVELVIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRMCVGCP 164
S A S +T Q A + F + DR+E +A + +N FVV R K + + F L ++ + SP+SG Y Y RW D HD+ G+LTRDL+R C G P
Sbjct: 9 STHAVSIPTTHLKQHAKKLTPDKFKALATSFLDRVESAIAPLHAPVNTVFVVER-TKTPAKLTIQTATHLFELAVLTKAQKVEFTSPISGLRTYVYNSKTSRW-EDETDHHDVEGLLTRDLMRTCTGIP 135
BLAST of EWM25875.1 vs. NCBI_GenBank
Match: gi|970616308|gb|KUF64492.1| (hypothetical protein AM587_10017222 [Phytophthora nicotianae]) HSP 1 Score: 65.0846 bits (157), Expect = 2.303e-9 Identity = 37/116 (31.90%), Postives = 58/116 (50.00%), Query Frame = 0
Query: 50 QVAPETIQVDFGEATGALFDRIEKGVAGMQE-LNDFFVVNRQNKVELVIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRMCVGCP 164
++ P+ + F + DR++ V + +ND F + R ELVI F ++ + Q+ +LSPVSG Y++ +RW D HD+ G+LTRDL+R C G P
Sbjct: 305 RLKPKLPKDKFTTLSTEFLDRVQAAVEPLHPPINDDFQLQRDGNGELVIRTN--SKEFVIKVLSSKQQIEFLSPVSGLRTYQWNLMTKRW-EDETDSHDIEGLLTRDLMRFCAGIP 417
BLAST of EWM25875.1 vs. NCBI_GenBank
Match: gi|567995136|gb|ETL45279.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|570956829|gb|ETP21808.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 62.3882 bits (150), Expect = 2.554e-9 Identity = 37/124 (29.84%), Postives = 61/124 (49.19%), Query Frame = 0
Query: 42 SSSSTSAGQVAPETIQVDFGEATGALFDRIEKGVAGMQE-LNDFFVVNRQNKVELVIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRMCVGCP 164
++ T ++ P+ + F + DR++ V + +ND F + ELVI + F ++ + Q+ +LSPVSG Y++ +RW D HD+ G+LTRDL+R C G P
Sbjct: 30 AAGGTRRRRLKPKLPKDKFTTLSTEFLDRVQAAVEPLHPPINDDFQLQCDGNGELVIRTNSKE--FVIKVLSSKQQIEFLSPVSGLRTYQWNLMTKRW-EDETDSHDIEGLLTRDLMRFCAGIP 150
BLAST of EWM25875.1 vs. NCBI_GenBank
Match: gi|695437656|ref|XP_009532269.1| (hypothetical protein PHYSODRAFT_286902 [Phytophthora sojae] >gi|348672116|gb|EGZ11936.1| hypothetical protein PHYSODRAFT_286902 [Phytophthora sojae]) HSP 1 Score: 58.5362 bits (140), Expect = 2.415e-8 Identity = 31/84 (36.90%), Postives = 44/84 (52.38%), Query Frame = 0
Query: 81 LNDFFVVNRQNKVELVIDLGPGKGAFTLQRDWAHNQLVYLSPVSGCNKYEYEQAGRRWLSIAEDKHDLTGILTRDLIRMCVGCP 164
+N+ F + R N ELVI F ++ Q+ + SPVSG Y++ +RW D HD+ G+LTRDL+R C G P
Sbjct: 8 VNEEFQLERDNNAELVI--RSNDKEFVIKVLSPKQQIEFTSPVSGLRTYQWNGMTKRW-EDETDSHDIEGLLTRDLMRFCAGIP 88 The following BLAST results are available for this feature:
BLAST of EWM25875.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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