EWM25872.1, cds4795 (CDS) Nannochloropsis gaditana

Overview
NameEWM25872.1
Unique Namecds4795
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:416529..417218 -

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Properties
Property NameValue
Protein idEWM25872.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100054g17.5564.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:416529..417218 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM25872.1 vs. NCBI_GenBank
Match: gi|585107740|gb|EWM25872.1| (hypothetical protein Naga_100054g17 [Nannochloropsis gaditana])

HSP 1 Score: 469.544 bits (1207), Expect = 1.574e-167
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 
Query:    1 MTATSQHLLCTAAGTIVLLTAFRFLGAGYFRNLIRWRKMAPWSPRRQKLVPDSSEREDLSRVIAGKMALVDDSEDRKFLKRLYEKVQCLETKILANQVAMEELTDTLEDALSRHQQQTAVTLTPLQNDVLQLKESLAALAALLDTSKTASAIPERSSELSEQKRAKEQGDDGGSGIFGTGAMETQFSHLTTVATALGIKPRFMEGGRSGCAEGSFPSYIISDWSELSTR 229
            MTATSQHLLCTAAGTIVLLTAFRFLGAGYFRNLIRWRKMAPWSPRRQKLVPDSSEREDLSRVIAGKMALVDDSEDRKFLKRLYEKVQCLETKILANQVAMEELTDTLEDALSRHQQQTAVTLTPLQNDVLQLKESLAALAALLDTSKTASAIPERSSELSEQKRAKEQGDDGGSGIFGTGAMETQFSHLTTVATALGIKPRFMEGGRSGCAEGSFPSYIISDWSELSTR
Sbjct:    1 MTATSQHLLCTAAGTIVLLTAFRFLGAGYFRNLIRWRKMAPWSPRRQKLVPDSSEREDLSRVIAGKMALVDDSEDRKFLKRLYEKVQCLETKILANQVAMEELTDTLEDALSRHQQQTAVTLTPLQNDVLQLKESLAALAALLDTSKTASAIPERSSELSEQKRAKEQGDDGGSGIFGTGAMETQFSHLTTVATALGIKPRFMEGGRSGCAEGSFPSYIISDWSELSTR 229
The following BLAST results are available for this feature:
BLAST of EWM25872.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107740|gb|EWM25872.1|1.574e-167100.00hypothetical protein Naga_100054g17 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4807rna4807Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications