EWM25869.1, cds4792 (CDS) Nannochloropsis gaditana

Overview
NameEWM25869.1
Unique Namecds4792
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:412219..412227 -
Alignment locationCM002464.1:412066..412087 -
Alignment locationCM002464.1:411771..411861 -
Alignment locationCM002464.1:411417..411507 -
Alignment locationCM002464.1:411264..411272 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25869.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100054g14.5561.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:412219..412227 -
CM002464.1supercontigCM002464.1:412066..412087 -
CM002464.1supercontigCM002464.1:411771..411861 -
CM002464.1supercontigCM002464.1:411417..411507 -
CM002464.1supercontigCM002464.1:411264..411272 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM25869.1 vs. NCBI_GenBank
Match: gi|585107737|gb|EWM25869.1| (hypothetical protein Naga_100054g14 [Nannochloropsis gaditana])

HSP 1 Score: 149.828 bits (377), Expect = 7.013e-46
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MKCIKLITSPGTALERSTSERRGLWLLLRPLACVFLGSWIGSIRIIPGRGVPGDQLDFEYHRNLINEALIEEQ 73
            MKCIKLITSPGTALERSTSERRGLWLLLRPLACVFLGSWIGSIRIIPGRGVPGDQLDFEYHRNLINEALIEEQ
Sbjct:    1 MKCIKLITSPGTALERSTSERRGLWLLLRPLACVFLGSWIGSIRIIPGRGVPGDQLDFEYHRNLINEALIEEQ 73
The following BLAST results are available for this feature:
BLAST of EWM25869.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107737|gb|EWM25869.1|7.013e-46100.00hypothetical protein Naga_100054g14 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4804rna4804Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications