EWM30201.1, cds479 (CDS) Nannochloropsis gaditana

Overview
NameEWM30201.1
Unique Namecds479
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1202658..1202735 +
Alignment locationCM002455.1:1202839..1204554 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30201.1
ProductUncharacterized protein family UPF0272
Orig transcript idgnl|cribi|Naga_100090g15.8850.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1202658..1202735 +
CM002455.1supercontigCM002455.1:1202839..1204554 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR002822UPF0272
Homology
BLAST of EWM30201.1 vs. NCBI_GenBank
Match: gi|585112859|gb|EWM30201.1| (Uncharacterized protein family UPF0272 [Nannochloropsis gaditana])

HSP 1 Score: 1197.57 bits (3097), Expect = 0.000e+0
Identity = 597/597 (100.00%), Postives = 597/597 (100.00%), Query Frame = 0
Query:    1 MSTRVAFLDCKCGVAGDMLLGALIDAGASREKLVDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHEEIPVDTQRGQSAASDENKTGGSGCHAHHSHEHHSHAHHEHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPPASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKVGRMGGVVVNVKPEYEDCRGAAMALGLPLRAVVDEATRVARGQVEGGGEGGEGEGRGKEKREMEEATRLARRMMGRPLCRWTFDRLGKVWERSSLETRKSGRERMPSLPPGS 597
            MSTRVAFLDCKCGVAGDMLLGALIDAGASREKLVDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHEEIPVDTQRGQSAASDENKTGGSGCHAHHSHEHHSHAHHEHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPPASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKVGRMGGVVVNVKPEYEDCRGAAMALGLPLRAVVDEATRVARGQVEGGGEGGEGEGRGKEKREMEEATRLARRMMGRPLCRWTFDRLGKVWERSSLETRKSGRERMPSLPPGS
Sbjct:    1 MSTRVAFLDCKCGVAGDMLLGALIDAGASREKLVDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHEEIPVDTQRGQSAASDENKTGGSGCHAHHSHEHHSHAHHEHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPPASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKVGRMGGVVVNVKPEYEDCRGAAMALGLPLRAVVDEATRVARGQVEGGGEGGEGEGRGKEKREMEEATRLARRMMGRPLCRWTFDRLGKVWERSSLETRKSGRERMPSLPPGS 597          
BLAST of EWM30201.1 vs. NCBI_GenBank
Match: gi|553179525|ref|XP_005852714.1| (rrna methyltransferase [Nannochloropsis gaditana CCMP526] >gi|422295818|gb|EKU23117.1| rrna methyltransferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 983.015 bits (2540), Expect = 0.000e+0
Identity = 482/486 (99.18%), Postives = 484/486 (99.59%), Query Frame = 0
Query:    1 MSTRVAFLDCKCGVAGDMLLGALIDAGASREKLVDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHEEIPVDTQRGQSAASDENKTGGSGCHAHHSHEHHSHAHHEHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPPASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKV 486
            MSTRVAFLDCKCGVAGDMLLGALIDAGASREK+VDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHEEIPVDTQRGQSAASDENK GGSGCHAHHSHEHHSHAHHEHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAP ASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAK+
Sbjct:    1 MSTRVAFLDCKCGVAGDMLLGALIDAGASREKVVDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHEEIPVDTQRGQSAASDENKRGGSGCHAHHSHEHHSHAHHEHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPSASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKL 486          
BLAST of EWM30201.1 vs. NCBI_GenBank
Match: gi|299469795|emb|CBN76649.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 366.311 bits (939), Expect = 4.308e-117
Identity = 232/551 (42.11%), Postives = 306/551 (55.54%), Query Frame = 0
Query:    6 AFLDCKCGVAGDMLLGALIDAGASREKLVDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHE---------------------EIPVDTQRGQSAASDENKTGGSGCHAHH----SHEHHSHAHHEHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDR--PLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPPASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKVGRMGGVVVNVKPEYEDCRGAAMALGLPLRAVVDEATRVARGQV 529
            A++DC  GVAGDMLL ALIDAGA  E + +GL +I  +  EW++   +V +  G IAA    V S Y H                          D   G S    +N+  G   H       +    + A       P R+L  IR+MIM + GLP +V+++SV VFT L EAEA THG  +D++HFHEVGA+DSIIDTVG VYALHLLG+++V+ SALP  EG T  TAHGILPVP PATLRLM+G+P  PGP+ A GELVTP+GA+LV+VL++   G+P +F P  +G+GAG+KDF  H N++RV++G+   PL SEE            +PV               +++R S   PA    E G                           +W++     R L  LEAN+DDMT E A + +E LL + GC D W  P +MKKGRP  T+ +LCE       +R +F E+ TLGVR  +V R AL R  V V T +G VR KV  + GVVV+ KPEYEDC+  A   G+PL+AV D+A  V +  +
Sbjct:    4 AYIDCFSGVAGDMLLAALIDAGAPLEAIREGLGTIAPIKGEWDINLHRVTKGMGSIAAAHVNVTSKYQHRPAAPPSASPHSDHSHGHTHSHGHSHDHSHGHSHGHTDNERDGQAQHRSEVVTPATTSPADATEGIEDGPVRDLTTIRKMIMES-GLPPAVKERSVRVFTELGEAEAKTHGSTLDQVHFHEVGAIDSIIDTVGVVYALHLLGIEKVYCSALPLSEG-TVWTAHGILPVPAPATLRLMVGLPTCPGPKSAKGELVTPSGAALVRVLSS-EFGRPSLFTPGAIGIGAGTKDFDKHPNILRVILGEVPPPLPSEE-----------PQPV---------------EQIRAS---PADGARETG---------------------------SWTT-----RQLSVLEANIDDMTGEAAGYLMEVLL-EAGCLDAWLCPILMKKGRPAFTVSVLCEQHDQERFVRLLFTESSTLGVRRRSVERCALRRKTVPVSTTFGDVRVKVAWLDGVVVSTKPEYEDCKVLATNAGVPLQAVTDQARAVVQASL 489          
BLAST of EWM30201.1 vs. NCBI_GenBank
Match: gi|570939174|gb|ETP04431.1| (hypothetical protein F441_18785 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 316.235 bits (809), Expect = 1.438e-97
Identity = 207/562 (36.83%), Postives = 278/562 (49.47%), Query Frame = 0
Query:    5 VAFLDCKCGVAGDMLLGALIDAGASREKLVDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHEEI--PVDTQRGQSAASDENKTG---------------GSGCHAHHSHEHHSH-------------------AHHEHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPPASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKVGRMGGVVVNVKPEYEDCRGAAMALGLPLRAVVDEATRVARGQVE 530
            +AF+DC  G+AGDMLLGALIDAGA  +++  GL S+H +  EWEL T +V +  G IA T A V SIY H+E   P  +   Q      +                      H H + E  +                    AH +    P RNL+ I+ +I  +D L    +++SVAVFT LA+AEA THG ++++IHFHEVGA+DSI+DT+G+V AL LLGV+EVHAS LP+  G T +  HG+LPVP PAT RLM+G+P+ P P+GA GELVTPTG SLVK LA+   G+PP F+             P H  V               GT D                       HA  +R +           G  + PM        P   L      ++  ++  +    +  LE NLDD+ P+   +  ERLL++    DVW     MKK RPG+ L +LC       +L  IF ET TLGVR + + R+ L R F+ V      V  KV  +G   VNV PE+E C+  AM   +PL  V+DE    A  Q++
Sbjct:    6 IAFIDCSAGIAGDMLLGALIDAGAPLDEIKRGLESLHGIKGEWELSTTRVWKGPGSIAGTKANVGSIYQHKEAGAPTPSHDVQHDHGHGHSHSHSHAHGHSHTHSHGHDDNTHTHDTVEVETSVDMSHDHSHDHDHEHEHEHAHGKEEDEPMRNLDDIKALIAESD-LSDWAKEKSVAVFTLLAQAEAHTHGTSLEEIHFHEVGAIDSIVDTIGSVIALDLLGVREVHASFLPFSSG-TVKCMHGVLPVPPPATFRLMIGVPVCPAPKGAKGELVTPTGISLVKALAS-TFGEPPAFI-------------PTHTGV-------------GAGTKDFP--------------------EHANIVRVAI----------GTKIDPMATEKSYVNPAVSLR-----SAESTTCPFATEKVVVLETNLDDLNPQVIGYVSERLLSEHHALDVWKQAIQMKKNRPGVCLSVLCRAEHEQEILETIFRETTTLGVRRNVMDRVFLSRKFICVSAFGRSVDVKVAFLGNEAVNVHPEFEHCKAIAMEQNIPLLQVIDEVKARALAQLK 503          
BLAST of EWM30201.1 vs. NCBI_GenBank
Match: gi|566011628|gb|ETI34539.1| (hypothetical protein F443_18975 [Phytophthora parasitica P1569] >gi|568037179|gb|ETM34770.1| hypothetical protein L914_18210 [Phytophthora parasitica])

HSP 1 Score: 315.464 bits (807), Expect = 2.534e-97
Identity = 208/562 (37.01%), Postives = 280/562 (49.82%), Query Frame = 0
Query:    5 VAFLDCKCGVAGDMLLGALIDAGASREKLVDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHEEIPV-----DTQRGQSAASDENKTGGSGCHAHHSH----EHHSH---------------------------AHHEHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPPASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKVGRMGGVVVNVKPEYEDCRGAAMALGLPLRAVVDEATRVARGQVE 530
            +AF+DC  G+AGDMLLGALIDAGA  +++  GL S+H +  EWEL T +V +  G IA T A V SIY H+E        D Q         + +   G    +SH      H+H                           AH +    P RNL+ I+ +I  +D L    +++SVAVFT LA+AEA THG ++++IHFHEVGA+DSI+DT+G+V AL LLGV+EVHAS LP+  G T +  HG+LPVP PAT RLM+G+P+ P P+GA GELVTPTG SLVK LA+   G+PP F+             P H  V                                G G +D    HA  +R +           G  + PM        P   L      ++  ++  +    +  LE NLDD+ P+   +  ERLL++    DVW     MKK RPG+ L +LC       +L  IF ET TLGVR + + R+ L R F+ V      V  KV  +G   V V PE+E C+  AM   +PL  V+DE    A  Q++
Sbjct:    6 IAFIDCSAGIAGDMLLGALIDAGAPLDEIKRGLESLHGIKGEWELSTTRVWKGPGSIAGTKANVGSIYQHKEAGAPTPSHDVQHDHGHGHSHSHSHAHGHSHTYSHGRDDNTHTHDTVEVETSVDMSHDHSHDHDHEHEHEHAHGKEEDEPMRNLDDIKALIAESD-LSDWAKEKSVAVFTLLAQAEAHTHGTSLEEIHFHEVGAIDSIVDTIGSVIALDLLGVREVHASFLPFSSG-TVKCMHGVLPVPPPATFRLMIGVPVCPAPKGAKGELVTPTGISLVKALAS-TFGEPPAFI-------------PTHTGV--------------------------------GAGTKD-FPEHANIVRVAI----------GTKIDPMATEKSYVNPAVSLR-----SAESTTCPFATEKVVVLETNLDDLNPQVIGYVSERLLSEHHALDVWKQAIQMKKNRPGVCLSVLCRAEHEQEILETIFRETTTLGVRRNVMDRVFLSRKFICVSAFGRSVDVKVAFLGNEAVTVHPEFEHCKAIAMEQNIPLLQVIDEVKARALAQLK 503          
BLAST of EWM30201.1 vs. NCBI_GenBank
Match: gi|675175877|ref|XP_008896823.1| (hypothetical protein PPTG_05093 [Phytophthora parasitica INRA-310] >gi|568102572|gb|ETN17243.1| hypothetical protein PPTG_05093 [Phytophthora parasitica INRA-310])

HSP 1 Score: 315.464 bits (807), Expect = 2.731e-97
Identity = 207/562 (36.83%), Postives = 278/562 (49.47%), Query Frame = 0
Query:    5 VAFLDCKCGVAGDMLLGALIDAGASREKLVDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHEEI--PVDTQRGQSAASDENKTG---------------GSGCHAHHSHEHHSH-------------------AHHEHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPPASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKVGRMGGVVVNVKPEYEDCRGAAMALGLPLRAVVDEATRVARGQVE 530
            +AF+DC  G+AGDMLLGALIDAGA  +++  GL S+H +  EWEL T +V +  G IA T A V SIY H+E   P  +   Q      +                      H H + E  +                    AH +    P RNL+ I+ +I  +D L    +++SVAVFT LA+AEA THG ++++IHFHEVGA+DSI+DT+G+V AL LLGV+EVHAS LP+  G T +  HG+LPVP PAT RLM+G+P+ P P+GA GELVTPTG SLVK LA+   G+PP F+             P H  V               GT D                       HA  +R +           G  + PM        P   L      ++  ++  +    +  LE NLDD+ P+   +  ERLL++    DVW     MKK RPG+ L +LC       +L  IF ET TLGVR + + R+ L R F+ V      V  KV  +G   VNV PE+E C+  AM   +PL  V+DE    A  Q++
Sbjct:    6 IAFIDCSAGIAGDMLLGALIDAGAPLDEIKRGLESLHGIKGEWELSTTRVWKGPGSIAGTKANVGSIYQHKEAGAPTPSHDVQHDHGHGHSHSHSHAHGHSHTHSHGHDDNTHTHDTVEVETSVDMSHDHSHDHDHEHEHEHAHGKEEDEPMRNLDDIKALIAESD-LSDWAKEKSVAVFTLLAQAEAHTHGTSLEEIHFHEVGAIDSIVDTIGSVIALDLLGVREVHASFLPFSSG-TVKCMHGVLPVPPPATFRLMIGVPVCPAPKGAKGELVTPTGISLVKALAS-TFGEPPAFI-------------PTHTGV-------------GAGTKDFP--------------------EHANIVRVAI----------GTKIDPMATEKSYVNPAVSLR-----SAESTTCPFATEKVVVLETNLDDLNPQVIGYVSERLLSEHHALDVWKQAIQMKKNRPGVCLSVLCRAEHEQEILETIFRETTTLGVRRNVMDRVFLSRKFICVSAFGRSVDVKVAFLGNEAVNVHPEFEHCKAIAMEQNIPLLQVIDEVKARALTQLK 503          
BLAST of EWM30201.1 vs. NCBI_GenBank
Match: gi|570969445|gb|ETP32564.1| (hypothetical protein F442_18755 [Phytophthora parasitica P10297])

HSP 1 Score: 314.694 bits (805), Expect = 6.336e-97
Identity = 207/566 (36.57%), Postives = 278/566 (49.12%), Query Frame = 0
Query:    5 VAFLDCKCGVAGDMLLGALIDAGASREKLVDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHEEI--PVDTQRGQSAASDENKTG---------------GSGCHAHHSHEHHSH-----------------------AHHEHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPPASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKVGRMGGVVVNVKPEYEDCRGAAMALGLPLRAVVDEATRVARGQVE 530
            +AF+DC  G+AGDMLLGALIDAGA  +++  GL S+H +  EWEL T +V +  G IA T A V SIY H+E   P  +   Q      +                      H H + E  +                        AH +    P RNL+ I+ +I  +D L    +++SVAVFT LA+AEA THG ++++IHFHEVGA+DSI+DT+G+V AL LLGV+EVHAS LP+  G T +  HG+LPVP PAT RLM+G+P+ P P+GA GELVTPTG SLVK LA+   G+PP F+             P H  V               GT D                       HA  +R +           G  + PM        P   L      ++  ++  +    +  LE NLDD+ P+   +  ERLL++    DVW     MKK RPG+ L +LC       +L  IF ET TLGVR + + R+ L R F+ V      V  KV  +G   VNV PE+E C+  AM   +PL  V+DE    A  Q++
Sbjct:    6 IAFIDCSAGIAGDMLLGALIDAGAPLDEIKRGLESLHGIKGEWELSTTRVWKGPGSIAGTKANVGSIYQHKEAGAPTPSHDVQHDHGHGHSHSHSHAHGHSHTHSHGHDDNTHTHDTVEVETSVDMSHDHSHDHDHDHDHEHEHEHAHGKEEDEPMRNLDDIKALIAESD-LSDWAKEKSVAVFTLLAQAEAHTHGTSLEEIHFHEVGAIDSIVDTIGSVIALDLLGVREVHASFLPFSSG-TVKCMHGVLPVPPPATFRLMIGVPVCPAPKGAKGELVTPTGISLVKALAS-TFGEPPAFI-------------PTHTGV-------------GAGTKDFP--------------------EHANIVRVAI----------GTKIDPMATEKSYVNPAVSLR-----SAESTTCPFATEKVVVLETNLDDLNPQVIGYVSERLLSEHHALDVWKQAIQMKKNRPGVCLSVLCRAEHEQEILETIFRETTTLGVRRNVMDRVFLSRKFICVSAFGRSVDVKVAFLGNEAVNVHPEFEHCKAIAMEQNIPLLQVIDEVKARALAQLK 507          
BLAST of EWM30201.1 vs. NCBI_GenBank
Match: gi|568007333|gb|ETL81572.1| (hypothetical protein L917_18123 [Phytophthora parasitica])

HSP 1 Score: 311.997 bits (798), Expect = 6.642e-96
Identity = 206/566 (36.40%), Postives = 278/566 (49.12%), Query Frame = 0
Query:    5 VAFLDCKCGVAGDMLLGALIDAGASREKLVDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHEEI--PVDTQRGQSAASDENKTG---------------GSGCHAHHSHEHHSH-----------------------AHHEHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPPASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKVGRMGGVVVNVKPEYEDCRGAAMALGLPLRAVVDEATRVARGQVE 530
            +AF+DC  G+AGDMLLGALIDAGA  +++  GL S+H +  EWEL T +V +  G IA T A V SIY H+E   P  +   Q      +                      H H + E  +                        AH +    P RNL+ I+ +I  +D L    +++SVAVFT LA+AEA THG ++++IHFHEVGA+DSI+DT+G+V AL LLGV+EVHAS LP+  G T +  HG+LPVP PAT RLM+G+P+ P P+GA GELVTPTG SLVK LA+   G+PP F+             P H  V                                G G +D    HA  +R +           G  + PM        P   L      ++  ++  +    +  LE NLDD+ P+   +  ERLL++    DVW     MKK RPG+ L +LC       +L  IF ET TLGVR + + R+ L R F+ V      V  KV  +G   V V PE+E C+  AM   +PL  V+DE    A  Q++
Sbjct:    6 IAFIDCSAGIAGDMLLGALIDAGAPLDEIKRGLESLHGIKGEWELSTTRVWKGPGSIAGTKANVGSIYQHKEAGAPTPSHDVQHDHGHGHSHSHSHAHGHSHTHSHGHDDNTHTHDTVEVETSVDMSHDHSHDHDHDHDHEHEHEHAHGKEEDEPMRNLDDIKALIAESD-LSDWAKEKSVAVFTLLAQAEAHTHGTSLEEIHFHEVGAIDSIVDTIGSVIALDLLGVREVHASFLPFSSG-TVKCMHGVLPVPPPATFRLMIGVPVCPAPKGAKGELVTPTGISLVKALAS-TFGEPPAFI-------------PTHTGV--------------------------------GAGTKD-FPEHANIVRVAI----------GTKIDPMATEKSYVNPAVSLR-----SAESTTCPFATEKVVVLETNLDDLNPQVIGYVSERLLSEHHALDVWKQAIQMKKNRPGVCLSVLCRAEHEQEILETIFRETTTLGVRRNVMDRVFLSRKFICVSAFGRSVDVKVAFLGNEAVTVHPEFEHCKAIAMEQNIPLLQVIDEVKARALAQLK 507          
BLAST of EWM30201.1 vs. NCBI_GenBank
Match: gi|567949160|gb|ETK74892.1| (hypothetical protein L915_18400 [Phytophthora parasitica] >gi|567977820|gb|ETL28316.1| hypothetical protein L916_18303 [Phytophthora parasitica])

HSP 1 Score: 311.997 bits (798), Expect = 6.778e-96
Identity = 205/560 (36.61%), Postives = 276/560 (49.29%), Query Frame = 0
Query:    5 VAFLDCKCGVAGDMLLGALIDAGASREKLVDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHEEI--PVDTQRGQSAASDENKTG---------------GSGCHAHHSHEHHSHAHH-----------------EHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPPASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKVGRMGGVVVNVKPEYEDCRGAAMALGLPLRAVVDEATRVARGQVE 530
            +AF+DC  G+AGDMLLGALIDAGA  +++  GL S+H +  EWEL T +V +  G IA T A V SIY H+E   P  +   Q      +                      H H + E  +                     +    P RNL+ I+ +I  +D L    +++SVAVFT LA+AEA THG ++++IHFHEVGA+DSI+DT+G+V AL LLGV+EVHAS LP+  G T +  HG+LPVP PAT RLM+G+P+ P P+GA GELVTPTG SLVK LA+   G+PP F              P H  V                                G G +D    HA  +R +           G  + PM        P   L      ++  ++  +    +  LE NLDD+ P+   +  ERLL++    DVW     MKK RPG+ L +LC       +L  IF ET TLGVR + + R+ L R F+ V      V  KV  +G   VNV PE+E C+  AM   +PL  V+DE    A  Q++
Sbjct:    6 IAFIDCSAGIAGDMLLGALIDAGAPLDEIKRGLESLHGIKGEWELSTTRVWKGPGSIAGTKANVGSIYQHKEAGAPTPSHDVQHDHGHGHSHSHSHAHGHSHTHSHGHDDNTHTHDTVEVETSVDMSHDHSHDHDHDHEHAHGKEEDEPMRNLDDIKALIAESD-LSDWAKEKSVAVFTLLAQAEAHTHGTSLEEIHFHEVGAIDSIVDTIGSVIALDLLGVREVHASFLPFSSG-TVKCMHGVLPVPPPATFRLMIGVPVCPAPKGAKGELVTPTGISLVKALAS-TFGEPPAF-------------IPTHTGV--------------------------------GAGTKD-FPEHANIVRVAI----------GTKIDPMATEKSYVNPAVSLR-----SAESTTCPFATEKVVVLETNLDDLNPQVIGYVSERLLSEHHALDVWKQAIQMKKNRPGVCLSVLCRAEHEQEILETIFRETTTLGVRRNVMDRVFLSRKFICVSAFGRSVDVKVAFLGNEAVNVHPEFEHCKAIAMEQNIPLLQVIDEVKARALAQLK 501          
BLAST of EWM30201.1 vs. NCBI_GenBank
Match: gi|570315390|gb|ETO63338.1| (hypothetical protein F444_18927 [Phytophthora parasitica P1976])

HSP 1 Score: 310.457 bits (794), Expect = 2.468e-95
Identity = 204/560 (36.43%), Postives = 276/560 (49.29%), Query Frame = 0
Query:    5 VAFLDCKCGVAGDMLLGALIDAGASREKLVDGLRSIHALAEEWELETEKVVRSKGRIAATLARVKSIYGHEEI--PVDTQRGQSAASDENKTG---------------GSGCHAHHSHEHHSHAHH-----------------EHHHRPHRNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPPASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKVGRMGGVVVNVKPEYEDCRGAAMALGLPLRAVVDEATRVARGQVE 530
            +AF+DC  G+AGDMLLGALIDAGA  +++  GL S+H +  EWEL T +V +  G IA T A V SIY H+E   P  +   Q      +                      H H + E  +                     +    P RNL+ I+ +I  +D L    +++SVAVFT LA+AEA THG ++++IHFHEVGA+DSI+DT+G+V AL LLGV+EVHAS LP+  G T +  HG+LPVP PAT RLM+G+P+ P P+GA GELVTPTG SLVK LA+   G+PP F+             P H  V                                G G +D    HA  +R +           G  + PM        P   L      ++  ++  +    +  LE NLDD+ P+   +  ERLL++    DVW     MKK RPG+ L +LC       +L  IF ET TLGVR + + R+ L R F+ V      V  KV  +G   V V PE+E C+  AM   +PL  V+DE    A  Q++
Sbjct:    6 IAFIDCSAGIAGDMLLGALIDAGAPLDEIKRGLESLHGIKGEWELSTTRVWKGPGSIAGTKANVGSIYQHKEAGAPTPSHDVQHDHGHGHSHSHSHAHGHSHTHSHGRDDNTHTHDTVEVETSVDMSHDHSHDHDHDHEHAHGKEEDEPMRNLDDIKALIAESD-LSDWAKEKSVAVFTLLAQAEAHTHGTSLEEIHFHEVGAIDSIVDTIGSVIALDLLGVREVHASFLPFSSG-TVKCMHGVLPVPPPATFRLMIGVPVCPAPKGAKGELVTPTGISLVKALAS-TFGEPPAFI-------------PTHTGV--------------------------------GAGTKD-FPEHANIVRVAI----------GTKIDPMATEKSYVNPAVSLR-----SAESTTCPFATEKVVVLETNLDDLNPQVIGYVSERLLSEHHALDVWKQAIQMKKNRPGVCLSVLCRAEHEQEILETIFRETTTLGVRRNVMDRVFLSRKFICVSAFGRSVDVKVAFLGNEAVTVHPEFEHCKAIAMEQNIPLLQVIDEVKARALAQLK 501          
The following BLAST results are available for this feature:
BLAST of EWM30201.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112859|gb|EWM30201.1|0.000e+0100.00Uncharacterized protein family UPF0272 [Nannochlor... [more]
gi|553179525|ref|XP_005852714.1|0.000e+099.18rrna methyltransferase [Nannochloropsis gaditana C... [more]
gi|299469795|emb|CBN76649.1|4.308e-11742.11conserved unknown protein [Ectocarpus siliculosus][more]
gi|570939174|gb|ETP04431.1|1.438e-9736.83hypothetical protein F441_18785 [Phytophthora para... [more]
gi|566011628|gb|ETI34539.1|2.534e-9737.01hypothetical protein F443_18975 [Phytophthora para... [more]
gi|675175877|ref|XP_008896823.1|2.731e-9736.83hypothetical protein PPTG_05093 [Phytophthora para... [more]
gi|570969445|gb|ETP32564.1|6.336e-9736.57hypothetical protein F442_18755 [Phytophthora para... [more]
gi|568007333|gb|ETL81572.1|6.642e-9636.40hypothetical protein L917_18123 [Phytophthora para... [more]
gi|567949160|gb|ETK74892.1|6.778e-9636.61hypothetical protein L915_18400 [Phytophthora para... [more]
gi|570315390|gb|ETO63338.1|2.468e-9536.43hypothetical protein F444_18927 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna479rna479Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications