EWM25894.1, cds4779 (CDS) Nannochloropsis gaditana

Overview
NameEWM25894.1
Unique Namecds4779
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:367764..369635 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25894.1
Productretinitis pigmentosa gtpase regulator
Orig transcript idgnl|cribi|Naga_100048g31.10266.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:367764..369635 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR013024Butirosin_synth_BtrG-like
IPR006840ChaC
IPR000408Reg_chr_condens
Homology
BLAST of EWM25894.1 vs. NCBI_GenBank
Match: gi|585107763|gb|EWM25894.1| (retinitis pigmentosa gtpase regulator [Nannochloropsis gaditana])

HSP 1 Score: 1250.34 bits (3234), Expect = 0.000e+0
Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 0
Query:    1 MPGLVVTVLSDSELETMGMREATDPPSRVHGVAYRIPDENVARVLDELDFREKGGYTRAVVEVKPTTSSTGGTDKSGRQEVIRALLYTANADNPNFHHPSTLEEAAHIVAWSRGPSGENREYLFEIEAYLRRAGAECPETFALTTRVEEVLERGLDRRGSLDARFRRDLVVVSGTQARGGTEGIWAVWQRLRLHAWGSNQHGQLGKRAEAVGDGAFDLDMGVKTDKDDEWPLPQPTVVEVDVATTVSLQSGSRAQAADEHRLLVRQLAAGGGHSAIVTGEDRLYLWGWNEAGQVGGSKYATLDGTHRVHVFPRRVAMVALGHAHTLVLEKDTGKLYGVGGNAAGEATGVVMEQRKQCRAVGGGLVTLDGGSDPIRFSWCDAGVRHSAGVTRDDGRLVTWGVGRSGACLPASVRGWAPVDGAKVRKVWCGWQHTVVLDDRGRVWTLGANKYGQLGRRGSQNDGLPELVEWPEGAGREGEGVRVEEVACGWSHVLVKTHDGEIWGWGRNTFGQLGSEAVAEPETIGRDYLPRPLLKDKDRLPHGVQVDKVTCGSESSMLVGKDGSLWVCGWNEHGNLGVGDGKDRKSWTLVPGLSAGSGGGKMLVACGGAHTLAMSREPSDTSVR 623
            MPGLVVTVLSDSELETMGMREATDPPSRVHGVAYRIPDENVARVLDELDFREKGGYTRAVVEVKPTTSSTGGTDKSGRQEVIRALLYTANADNPNFHHPSTLEEAAHIVAWSRGPSGENREYLFEIEAYLRRAGAECPETFALTTRVEEVLERGLDRRGSLDARFRRDLVVVSGTQARGGTEGIWAVWQRLRLHAWGSNQHGQLGKRAEAVGDGAFDLDMGVKTDKDDEWPLPQPTVVEVDVATTVSLQSGSRAQAADEHRLLVRQLAAGGGHSAIVTGEDRLYLWGWNEAGQVGGSKYATLDGTHRVHVFPRRVAMVALGHAHTLVLEKDTGKLYGVGGNAAGEATGVVMEQRKQCRAVGGGLVTLDGGSDPIRFSWCDAGVRHSAGVTRDDGRLVTWGVGRSGACLPASVRGWAPVDGAKVRKVWCGWQHTVVLDDRGRVWTLGANKYGQLGRRGSQNDGLPELVEWPEGAGREGEGVRVEEVACGWSHVLVKTHDGEIWGWGRNTFGQLGSEAVAEPETIGRDYLPRPLLKDKDRLPHGVQVDKVTCGSESSMLVGKDGSLWVCGWNEHGNLGVGDGKDRKSWTLVPGLSAGSGGGKMLVACGGAHTLAMSREPSDTSVR
Sbjct:    1 MPGLVVTVLSDSELETMGMREATDPPSRVHGVAYRIPDENVARVLDELDFREKGGYTRAVVEVKPTTSSTGGTDKSGRQEVIRALLYTANADNPNFHHPSTLEEAAHIVAWSRGPSGENREYLFEIEAYLRRAGAECPETFALTTRVEEVLERGLDRRGSLDARFRRDLVVVSGTQARGGTEGIWAVWQRLRLHAWGSNQHGQLGKRAEAVGDGAFDLDMGVKTDKDDEWPLPQPTVVEVDVATTVSLQSGSRAQAADEHRLLVRQLAAGGGHSAIVTGEDRLYLWGWNEAGQVGGSKYATLDGTHRVHVFPRRVAMVALGHAHTLVLEKDTGKLYGVGGNAAGEATGVVMEQRKQCRAVGGGLVTLDGGSDPIRFSWCDAGVRHSAGVTRDDGRLVTWGVGRSGACLPASVRGWAPVDGAKVRKVWCGWQHTVVLDDRGRVWTLGANKYGQLGRRGSQNDGLPELVEWPEGAGREGEGVRVEEVACGWSHVLVKTHDGEIWGWGRNTFGQLGSEAVAEPETIGRDYLPRPLLKDKDRLPHGVQVDKVTCGSESSMLVGKDGSLWVCGWNEHGNLGVGDGKDRKSWTLVPGLSAGSGGGKMLVACGGAHTLAMSREPSDTSVR 623          
BLAST of EWM25894.1 vs. NCBI_GenBank
Match: gi|1210526152|dbj|GAX15070.1| (hypothetical protein FisN_12Lh233 [Fistulifera solaris])

HSP 1 Score: 293.508 bits (750), Expect = 1.054e-86
Identity = 226/639 (35.37%), Postives = 310/639 (48.51%), Query Frame = 0
Query:    1 MPGLVVTVLSDSELETMGMREATDPPSRVHGVAYRIPDENVARVLDELDFREKGGYTRAVVEVKPTTSSTGGTDKSGRQEVIRALLYTANADNPNF--HHPSTLEEAAHIVAWSRGPSGENREYLFEIEAYLRRAGAECPETFALTTRVEEVLERGLDRRGSLDARFRRDLVVVSGTQARGGTEGIWAVWQRLRLHAWGSNQHGQLGKRAEAVGDGAFDLDMGVKTDKDDEWPLPQPTVVEVDVATTVSLQSGSRAQAADEHRLLVRQ-------LAAGGGHSAIVTGEDRLYLWGWNEAGQVGGSKYATLDGTHRVHVFPRR------VAMVALGHAHTLVLEKDTGKLYGVGGNAAGEATGVVMEQRKQCRAVGGGLVTLDGGSDPIRFSWCDAGVRHSAGVTRDDGRLVTWGVGRSGACLPASVRGWAPVDGAKVRKVWCGWQHTVVLDDRGRVWTLGANKYGQLGRRG-SQNDGLPELVEWPEGAGREGEGVRVEEVACGWSHVLVKTHDGE----IWGWGRNTFGQLGSEAVAEPETIGRDYLPRPLLKDKDRLPHGVQVDKVTCGSESSMLVGKDGSLWVCGWNEHGNLGVGDGKDRKSWTLVPGLSAGSGGG------KMLVACGGAHTLAM 613
             PG+V T+L D E+  +   +  D P+   G+ Y +P E V   L ELDFREKGGY R V++V          D++G  +V++ALLY    DNP         L  AA I++ + GPSG N EYL +++ +L        E+    +++E++ +       S+   F+RD  +     A                   GSNQH QL  + +AVG+                                  L  G  A    E  L V +       + AGGGHSA++T E +LYLWGWNE GQ+G       D +  +H  P R      V  VALG +HTLVLE+ TGKL+G G N+ G+  G +  +RK         V L      + F    AG+ HSA VT+ DG+L+T+G  + G CL  S   W P D +KV +V CG +HTVVLD +GRVWT G N+YGQLGR+   ++D  P LV+             V+ + CGWSH +V   + +    +WGWGRN  GQLG   +A+   + R   PR L KD         V  + CGSES++LV  +  +W CGWNEHGNL  G  +D    T   G S     G      ++ VA GGAH +AM
Sbjct:  128 FPGIVCTLLKDDEVRQLRSLD-YDSPTFTEGLVYEVPSELVDECLAELDFREKGGYARDVIDVI--------DDQTG--QVLQALLYRGTLDNPAIWPRVLRYLPFAAAIMSVAVGPSGANHEYLHQLDDFL--------ESSTTASQMEQLFDDTY-ILSSMTKSFQRDATLFFFVAA-------------------GSNQHNQLLLK-DAVGN----------------------------------LHQGEDAHVMTESVLCVSRRSDVATGIYAGGGHSALLTQEGQLYLWGWNEHGQLGRGDNVVSDSSLPIH--PIRPLAQIVVDQVALGFSHTLVLERGTGKLFGFGDNSRGQVNGQI--ERKAISIFEPTEVAL---YKDVIFKEVAAGLFHSACVTK-DGQLITFGCRKFGQCLEGS--SWTPSD-SKVIQVACGRRHTVVLDAKGRVWTFGDNQYGQLGRQSVDRSDPTPRLVD-------VDSTWTVQAIHCGWSHTVVLAQNADNQTIVWGWGRNDKGQLG---LADTSCVTR---PRLLFKDH-------SVVSLDCGSESTILVDAEDRIWSCGWNEHGNLADGSTEDAHQLTRAIGASVPLTPGTPEDTSRLRVAAGGAHVIAM 661          
BLAST of EWM25894.1 vs. NCBI_GenBank
Match: gi|1210517402|dbj|GAX23659.1| (hypothetical protein FisN_12Hh233 [Fistulifera solaris])

HSP 1 Score: 286.96 bits (733), Expect = 3.100e-84
Identity = 221/632 (34.97%), Postives = 309/632 (48.89%), Query Frame = 0
Query:    1 MPGLVVTVLSDSELETMGMREATDPPSRVHGVAYRIPDENVARVLDELDFREKGGYTRAVVEVKPTTSSTGGTDKSGRQEVIRALLYTANADNPNFHHPSTLEE---AAHIVAWSRGPSGENREYLFEIEAYLRRAGAECPETFALTTRVEEVLERGLDRRGSLDARFRRDLVVVSGTQARGGTEGIWAVWQRLRLHAWGSNQHGQLGKRAEAVGDGAFDLDMGVKTDKDDEWPLPQPTVVEVDVATTVSLQSGSRAQAADEHRLLVRQLAAGGGHSAIVTGEDRLYLWGWNEAGQVGGSKYATLDGTHRVHVFPRR---VAMVALGHAHTLVLEKDTGKLYGVGGNAAGEATGVVMEQRKQCRAVGGGLVTLDGGSDPIRFSWCDAGVRHSAGVTRDDGRLVTWGVGRSGACLPASVRGWAPVDGAKVRKVWCGWQHTVVLDDRGRVWTLGANKYGQLGRRG-SQNDGLPELVEWPEGAGREGEGVRVEEVACGWSH--VLVKTHDGE--IWGWGRNTFGQLGSEAVAEPETIGRDYLPRPLLKDKDRLPHGVQVDKVTCGSESSMLVGKDGSLWVCGWNEHGNLGVGDGKDRKSWT--------LVPGLSAGSGGGKMLVACGGAHTLAM 613
             PG+V T+L D E+  +   +  D P+   G+ Y +P E V   L ELDFREKGGY R V++V          D++G  +V++ALLY    DNP    P  L +   AA +++ + GPSG N EYL +++A+L  + A         +++E++ +       S+   F+RD  +     A                   GSNQH QL  + +AVGD                  L Q   V     + + +   S              + AGGGHSA++T E RLYLWGWNE GQ+G +   +        + P     V  VALG +HTLVLE+ TGKL+  G N+ G+  G +   +K         + L        F    AG+ HSA VT+D G+L+T+G  + G CL  S   W P D + + +V CG +HTV LD++GRVWT G N+YGQLGR   ++ D  P LVE        G   RV+ + CGWSH  VL +  D +  +WGWGRN  GQLG   +A+   + R   P  L +D     H   ++ + CGSES++LV     +W CGWNEHGNL  G   D    T        L+PG        ++ VA GGAH +AM
Sbjct:  130 FPGIVCTLLKDQEVRQLRSLD-YDSPTFTEGLVYEVPSELVDECLAELDFREKGGYARDVIDVI--------DDQTG--DVLQALLYRGTLDNPAIW-PRVLRDLPFAAAVLSVAVGPSGTNHEYLHQLDAFLESSTA--------ASQMEQLFDDTY-ILSSMTKTFQRDATLFFFVAA-------------------GSNQHNQLLLK-DAVGD------------------LHQGEDVYFMTESVLCISRRSDPSTG---------IYAGGGHSALLTQEGRLYLWGWNEHGQLGMTPGVSDSPLPIRPIQPLAQIVVDKVALGFSHTLVLERGTGKLFAFGDNSRGQVNGQI--DKKSLSIFEAKEIALYKND---MFKEVAAGLFHSACVTKD-GQLITFGCRKFGQCLEGS--SWTPSD-SSILQVVCGRRHTVALDEKGRVWTFGDNQYGQLGRETRNKADPSPGLVEM-------GSTWRVQTIHCGWSHTVVLAQNDDNQTVVWGWGRNDKGQLG---LADTSCVTR---PTYLFQD-----HSAAIESLDCGSESTVLVDAKDRIWGCGWNEHGNLANGSTDDAHQLTQALGALVPLIPGYPEDI--SRLRVAAGGAHVIAM 664          
BLAST of EWM25894.1 vs. NCBI_GenBank
Match: gi|219121886|ref|XP_002181288.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407274|gb|EEC47211.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 266.159 bits (679), Expect = 1.139e-76
Identity = 221/649 (34.05%), Postives = 298/649 (45.92%), Query Frame = 0
Query:    1 MPGLVVTVLSDSELETMGMREATDPPSRVHGVAYRIPDENVARVLDELDFREKGGYTRAVVEVKPTTSSTGGTDKSGRQEVIRALLYTANADNPNFHHPSTL--------EEAAHIVAWSRGPSGENREYLFEIEAYLRRAGAECPETFALTTRVEEVLERGLDRRGSLDARFRRDLVVVSGT-QARGGTEGIWAVWQRLR-LHAWGSNQHGQLGKRAEAVGDGAFDLDMGVKTDKDDEWPLPQPTVVEVDVATTVSLQSGSRAQAADEHRLLVRQLAAGGGHSAIVTGEDRLYLWGWNEAGQVGGSKYATLDGTHRVHVFPR--RVAMVALGHAHTLVLEKDTGKLYGVGGNAAGEATGVVMEQRKQCRAVGGGLVTLDGGSDPIR--FSWCDAGVRHSAGVTRDDGRLVTWGVGRSGACLPASVRG-----WAPVDGAKVRKVWCGWQHTVVLDDRGRVWTLGANKYGQLGR--RGSQNDGLPELVEWPEGAGREGEGVRVEEVACGWSHVLVKTHDGE----IWGWGRNTFGQLG---SEAVAEPETIGRDYLPRPLLKDKDRLPHGVQVDKVTCGSESSMLVGKDGSLWVCGWNEHGNLGVGDGKDRKSW--------TLVPGLSAGSGGGKMLVACGGAHTLAM 613
             PG+V T+L D E     +    D  +   G+ + +P   V   L ELDFREKGGY R ++EV          DKSG+  V++ALLY     NP F  P  L        E    I+A + GPSGEN  YL  ++ +L +  +                       GS   ++   LV+ S T Q R          Q L  +   GSNQ  QL  + E      F+         +D   + +  V+  D    + +               V  L AGGGHSAI+    RL+L+G NE  Q+G S          +    R   ++  +LG +H+LV+EK+TG++Y  G NA G+A          C +       L     P++       AGV HSA V+ +DG L+TWG GR G CLP  VR      W P DG++V  V CG +HTV  DDRGRVW+ G NKYGQLGR  +G +   +P LV+   G     + + V  V CGWSH +++  +G+    ++GWGRN  GQLG   S  V  P                 RL    ++  V CGSES+ +V  DG +W CGWNEHGNLG+G   D            TL PG S  S  G   +A GGAH +AM
Sbjct:   89 FPGIVCTLLKDQEFREF-LSSGVDEETLTEGLIFEVPPPLVEECLAELDFREKGGYARDIIEVV--------EDKSGK--VVQALLYRGTPQNPAFW-PRALRDLPFAAGESLQTIMATAIGPSGENEVYLSRLDHFLGKVAS-----------------------GSTLKKYDDTLVLASMTKQLRN---------QNLHFMFGSGSNQRNQLLLQTENNAAALFN--------NEDAHEMKE-IVLCADQTDKIEVNEK------------VISLFAGGGHSAILMQSGRLFLFGSNEHSQLGASGITQSSFPLPILTCLRDLFISYCSLGFSHSLVVEKETGRVYSFGDNARGQA------DPDNCASTIPLPTAL-----PLKEHIVAVFAGVFHSAAVS-EDGELITWGCGRFGQCLPV-VRHRLYGHWKPDDGSRVLGVACGRRHTVTFDDRGRVWSFGENKYGQLGRDLKGEKYSRVPSLVDGDWGL----DSLSVTGVHCGWSHTILQLENGKGELILFGWGRNDKGQLGVGTSSIVFNPV----------------RLYPSHKIRLVACGSESTAIVDTDGEIWSCGWNEHGNLGLGHDFDAFELTKIKGAPITLTPGYSEKSSLG---LALGGAHMIAM 636          
BLAST of EWM25894.1 vs. NCBI_GenBank
Match: gi|397620438|gb|EJK65722.1| (hypothetical protein THAOC_13394 [Thalassiosira oceanica])

HSP 1 Score: 248.054 bits (632), Expect = 5.452e-69
Identity = 217/649 (33.44%), Postives = 293/649 (45.15%), Query Frame = 0
Query:    3 GLVVTVLSDSELETMGMREATD---PPSRVHGVAYRIPDENVARVLDELDFREKGGYTRAVVEVKPTTSSTGGTDKSGRQEVIRALLYTANADNPNFHHPSTLEE--AAHIVAWSRGPSGENREYLFEIEAYLRRAGAECPETFALTTRVEEVLERGLDRRGSLDARFRRDLVVVSGTQARGGTEGIWAVWQRLRLHAWGSNQHGQLGKRAEAVGDGAFDLDMGVKTDKDDEWPLPQPTVVEVDVATTVSLQSGSRAQAADEHRLLVRQLAAGGGHSAIVTGEDRLYLWGWNEAGQVGGSKYATL-----DGTHRVHVFP---RRVAMVALGHAHTLVLEKDTGKLYGVGGNAAGEATGVVMEQRKQCRAVGGGLVTLDGGSDPIRFSWCDAGVRHSAGVTRDDGRLVTWGVGRSGACL----------PASVRGWAPVDGAKVRKVWCGWQHTVVLDDRGRVWTLGANKYGQLGRR--GSQNDGLPELVEWPEGAGREGEGVRVEEVACGWSHVLVKTHDG-----EIWGWGRNTFGQLGSEAVAEPETIGRDYLPRPLLKDKDRLPHGV-QVDKVTCGSESSMLVGKDGSLWVCGWNEHGNLGVGDGKDRKSWT--------LVPGLSAGSGGGKMLVACGGAHTLA 612
            G+V T+LSD E+  +   +  D   P S   G+ Y +      R L ELDFREKGGY R V++V           + G  E +RALLY    DNP F   + L+   AA +++ + GPSG N  YL  ++ +L                 ++         GSL   FR                          L   GSN+HGQL      + +G    D G ++ K+         V EV + T        R    ++H      L AGGGHSA++TG  RL+LWGWN AGQ+G  + A L     D      V P    +VA   LGH+HT+V+E+DTG+++  G +  G+ +G          A       +  G +   F    AG+ H+AGVTR  G LVTWG GR G CL           ++V  W P DG  + KV CG +HT+ LD  GRVW+LG N++GQLGRR  G      P  V+ P G    G      EV CGWSH +    DG     E+ GWGR   GQLG E        G    P  L         GV  V    CG+ES+ +   +G ++  GWNEHGNLG+G  +     T         V   S+ S   ++L+A GGAH ++
Sbjct:  163 GIVCTLLSDGEVRKLQGGDPADGKHPVSSTEGLIYTVDPSLANRCLSELDFREKGGYARDVIDVV----------EDGTGETVRALLYRGTPDNPAFWRRALLDMPLAAAVMSVAEGPSGRNDAYLLSLDEFLTAHNQPRGSDGGPNHSGDDATGELARMVGSLQTDFRPYF-----------------------LFGAGSNEHGQL------LLNGVPGDDNGSESTKEAH------EVSEVLLVTP-------RDDKDEDHE--ASSLHAGGGHSALLTGGGRLHLWGWNGAGQLG-REGAFLEEEADDTRSLFDVVPPLGMKVAAADLGHSHTVVIERDTGRVFCFGDDGRGQVSGATNSSSTPLPAQSAPRTPV--GLESEFFVDVAAGLFHTAGVTRG-GELVTWGCGRFGQCLVPSESDDRAASSTVGRWRPPDGVGLEKVACGRRHTIALDVEGRVWSLGDNRHGQLGRRSDGGGPSREPSPVDGPLGQAGSG----CFEVHCGWSHAVALVRDGIAGSVEVHGWGRADRGQLGFEC-----EDGSVPSPTRLAAGPSGSDGGVAAVRSACCGAESTHVADSNGVVYSTGWNEHGNLGIGRAEAEHCMTWRRTSGAKAVSPPSSASKDWEILIAAGGAHFIS 744          

HSP 2 Score: 72.4034 bits (176), Expect = 1.453e-9
Identity = 87/260 (33.46%), Postives = 116/260 (44.62%), Query Frame = 0
Query:  381 AGVRHSAGVTRDDGRLVTWG------VGRSGACLPA------SVRGWAPVDGAKVRKVWCGWQHTVVLD-DRGRVWTLGANKYGQL-GRRGSQNDGLPELVEWPEGAGREGEGVRVE---EVACGWSHVLVKTHDGEIWGWGRNTFGQL----GSEAVAEPETIGRDYLPRPLLKDKDRLPHGVQVDKVTCGSESSMLVGKDGSLWVCGWNEHGNLGV---GDGKDRKSWTLVPGLSAGSGGGKMLVACGGAHTLAMSRE 616
            AG  HSA +T   GRL  WG      +GR GA L        S+    P  G KV     G  HTVV++ D GRV+  G +  GQ+ G   S +  LP      + A R   G+  E   +VA G  H    T  GE+  WG   FGQ      S+  A   T+GR            R P GV ++KV CG   ++ +  +G +W  G N HG LG    G G  R+  + V G    +G G   V CG +H +A+ R+
Sbjct:  380 AGGGHSALLT-GGGRLHLWGWNGAGQLGREGAFLEEEADDTRSLFDVVPPLGMKVAAADLGHSHTVVIERDTGRVFCFGDDGRGQVSGATNSSSTPLPA-----QSAPRTPVGLESEFFVDVAAGLFHTAGVTRGGELVTWGCGRFGQCLVPSESDDRAASSTVGRW-----------RPPDGVGLEKVACGRRHTIALDVEGRVWSLGDNRHGQLGRRSDGGGPSREP-SPVDGPLGQAGSGCFEVHCGWSHAVALVRD 621          
BLAST of EWM25894.1 vs. NCBI_GenBank
Match: gi|1072230422|gb|OEU15155.1| (RCC1/BLIP-II protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 236.113 bits (601), Expect = 2.491e-65
Identity = 199/665 (29.92%), Postives = 286/665 (43.01%), Query Frame = 0
Query:    1 MPGLVVTVLSDSELETMGM-----------REATDPPSRVHGVAYRIPDENVARVLDELDFREKGGYTRAVVEVKPTTSSTGGTDKSGRQEVIRALLYTANADNPNFHHPSTLE--EAAHIVAWSRGPSGENREYLFEIEAYLRRAGAECPETFALTTRVEEVLERGLDRRGSLDARFRRDLVVVSGTQARGGTEGIWAVWQRLRLHAWGSNQHGQLGKRAEAVGDGAFDLDMGVKTDKDDEWPLPQPTVVEVDVATTVSLQSGSRAQAADEHRLLVRQLAAGGGHSAIVTGEDRLYLWGWNEAGQVGGSKYATLDGTHRVHVFPR-------RVAMVALGHAHTLVLEKDTGKLYGVGGNAAGEATGVVMEQRKQCRAVGGGLVT----LDGGSDPIRFSWCDAGVRHSAGVTRDDGRLVTWGVGRSGAC---------------LPASVRGWAPVDGAKVRKVWCGWQHTVVLDDRGRVWTLGANKYGQLGRRGSQNDGL-PELVEWPEGAGREGEGVRVEEVACGWSHVLVKTHDGE-----IWGWGRNTFGQLGSEAVAEPETIGRDYLPRPLLKDKDRLPHGVQVDKVTCGSESSMLVGKDGSLWVCGWNEHGNLGVGDGKDRKSWTLVPGLSAGSGG--------GKMLVACGGAHTLA 612
             PG+V T+L+  E  ++             RE  D      GV + +P E V   L+ELDFREKGGY R V EV    S          ++  +ALLY    +NP F   + L+   +A I++ S GPSG N  YL  +  +L        ET+A  T+    + R                                  +Q   L   GSNQH QL        + AF +     T K            E+ ++T++    G +   +         + AGGGHSAI+T   RL+LWGWNE  Q G     +L G     + P         V  V+LG +HTLV+EK+TG+LY  G N  G+ TG    Q    R +    +T    +D   D +     +AG+ HSA +T   G L+T+G  R G                 L    R W P +  +V  V  G +HTVV+D   R+WT G NK+GQLGR+  ++    P +V   +  G++        V CG+SH +++    E      +G+GRN  GQLG+ +  +         P  L  D +       +  + CGSES+M++  +G L+ CGWNEHGN G G  +     TL   L+ GS            + +A GGAH + 
Sbjct:   91 FPGIVCTLLTKQEHASVVASAESFSKSSSDRETADSLCLTEGVIFNVPPELVQETLEELDFREKGGYARDVCEVVEEES----------KKSYKALLYRGTPENPAFSSRALLDLPFSAAIMSVSVGPSGANDIYLNNLNKFLS-------ETYATETKTLTDMLRSFQEE-----------------------------YQLYFLSGGGSNQHNQL--LLNRPNNSAFLVGEDAHTRK------------EIVLSTSLHTDDGPKQLCSP------VDVFAGGGHSAILTKNGRLFLWGWNEDLQCGSKSTVSL-GNKNDQLLPFIEPLSNISVEKVSLGFSHTLVVEKETGRLYAFGNNERGQVTGC---QAASVRDISTSPMTPGFLIDEEIDIV-----EAGMFHSAVITTR-GELITFGCNRFGQSNFLEEGGNVLDAPESLTYKYRRWKPPNADRVFDVALGRRHTVVVDSLNRIWTFGENKHGQLGRKTRESKCCTPSIVTMEDTVGKDD----TVSVHCGFSHTIIQVRSREGNRNRFYGFGRNDQGQLGNGSNVQVN------FPIQLFSDNN-------IRTIQCGSESTMVIDTEGQLYGCGWNEHGNCGTGAQETENCLTL--SLTRGSKCYTPPDMEESDIALAVGGAHFIT 660          
BLAST of EWM25894.1 vs. NCBI_GenBank
Match: gi|224003935|ref|XP_002291639.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973415|gb|EED91746.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 185.652 bits (470), Expect = 1.630e-47
Identity = 141/365 (38.63%), Postives = 191/365 (52.33%), Query Frame = 0
Query:  180 GTEGIWAVWQRLRL---HAWGSNQHGQLGKRAEAVGDGAFDLDMGVKTDKDDEWPLPQPTVVEVDVATTVSLQSGSRAQAADEHRLLVRQLAAGGGHSAIVTGEDRLYLWGWNEAGQVGGSKYATLDGTHRVHVFPR---RVAMVALGHAHTLVLEKDTGKLYGVGGNAAGEATGVVMEQRKQCRAVGGGLVTLDGGSDPI--RFSWCDAGVRHSAGVTRDDGRLVTWGVGRSGACLP-----ASVRGWAPVDGAKVRKVWCGWQHTVVLDDRGRVWTLG-ANKYGQLGRRGSQNDGLPELVEWPEGAGREGEGVRVEEVACGWSHV--LVKTHDGEI-WGWGRNTFGQLG----SEAVAEPETI 523
            GT    A W+R+ +   +A GSN+H QL             L    +TD + E       V EV   T + L +      ADE    +  L AGGGHSA++T    ++ WGWN+AGQ+G       D    +   P    ++A+  LGH HTLV+EKDTG+L+G G N  G+  G+V        AV   + T    S  I  +F    AG+ HSA +T D G LVT+G  R    LP     +S+  W P DG+K+ +V CG +HTV+LDD GRVWTLG  NKYGQLGR  S +   P+LV+ P G    G  V    +  GWSH+  L++  DG + +GWGRN  GQLG    ++ +A P+ I
Sbjct:  212 GTPENPAFWKRVFMDLTYAAGSNEHNQL-------------LLSPSETDNNSE-------VNEVHELTEMLLVTLRLQDEADE----LVSLHAGGGHSALLTKSGAMHTWGWNDAGQLGRLNNPQEDSVSSLANVPPLSIKIAVADLGHTHTLVIEKDTGRLFGFGENGRGQVDGLV-----NSNAVTTSMHTPTTPSGLIDEQFVEVAAGLFHSAAITVD-GDLVTFGCSRFRQSLPPDNDTSSIGRWRPSDGSKLVQVTCGRRHTVMLDDLGRVWTLGLENKYGQLGRSKSLDSPTPQLVDGPLGQPNSGCVV----LTSGWSHILALIRKKDGTVLYGWGRNDKGQLGKQNETDFIATPQVI 542          
BLAST of EWM25894.1 vs. NCBI_GenBank
Match: gi|298709017|emb|CBJ30967.1| (ChaC-like protein [Ectocarpus siliculosus])

HSP 1 Score: 140.198 bits (352), Expect = 5.829e-34
Identity = 74/151 (49.01%), Postives = 91/151 (60.26%), Query Frame = 0
Query:    1 MPGLVVTVLSDSELETMGMREATDPPSRVHGVAYRIPDENVARVLDELDFREKGGYTRAVVEVKPTTSSTGGTDKSGRQE----VIRALLYTANADNPNFHHPSTLEEAAHIVAWSRGPSGENREYLFEIEAYLRRAGAECPETFALTTRV 147
             PGLV T++SD++LE +G R A+DPPSR HGVAY IP+     VL  LDFREKGGYTRA V+V P     G  + +   E       ALLYT    NPNFH PS ++EAA  +A + GPSG N EYLF +  YL + G   P    L+  V
Sbjct:  100 FPGLVATLVSDADLEALGQRSASDPPSRTHGVAYLIPENKAEEVLAGLDFREKGGYTRATVDVLPAGGEGGQKEDTTSSEDTAVPTPALLYTGTTSNPNFHVPS-IDEAADTIALAVGPSGPNYEYLFSLSQYLEKVGTPDPHLMELSDMV 249          
BLAST of EWM25894.1 vs. NCBI_GenBank
Match: gi|321478150|gb|EFX89108.1| (hypothetical protein DAPPUDRAFT_304662 [Daphnia pulex])

HSP 1 Score: 139.428 bits (350), Expect = 1.010e-32
Identity = 119/396 (30.05%), Postives = 173/396 (43.69%), Query Frame = 0
Query:  191 LRLHAWGSNQHGQLGKRAEAVGDGAFDLDMGVKTDKDDEWPLPQPTVVEVDVATTVSLQSGSRAQAADEHRLLVRQLAAGGGHSAIVTGEDRLYLWGWNEAGQVGGSKYATLDGTHRVHVFP-RRVAMVALGHAHTLVLEKDTGKLYGVGGNAAGEATGVVMEQRKQCRAVGGGLVTLDGGSDPIRFSWCDAGVRHSAGVTRDDGRLVTWGVGRSGACLPASVRGWAPVDGAKVRKVWCGWQHTVVLDDRGRVWTLGANKYGQLGRRGSQNDGL--PELVEWPEGAGREGEGVRVEEVACGWSHVLVKTHDGEIWGWGRNTFGQLGSEAVAEPETIGRDYLPRPLLKDKDRLPHGVQVDKVTCGSESSMLVGKDGSLWVCGWNEHGNLGVGDGKDR 583
            ++L  WG+N HGQLG+         F+ ++           L  PT   +      S+                 Q+A GG HS IVT   R++  G + +GQ+  ++  +      +H      V  VA G   TL L  + G LYG G N           Q      V  GL+ L    D   F    AG+RH+A VT + G L  WG+ +        V+    V G  V K  CG +H V L  + ++   G N +GQ G+  +    +  P  +EW E  GR      +E V  GW+H LV T   +++ WGRNT+GQLG  +          +LP+       R+P    +  +  GSE SM + K G LW  GWNEHG+LG G+ +++
Sbjct:    1 MQLFTWGTNSHGQLGQ--------GFESEL-----------LSVPTAAHIPEELQQSIAYNC-------------QIAGGGNHS-IVTSNGRVWAAGLDNSGQICSTEKKSASVFSEIHALAGCNVTSVACGWDFTLFLASN-GNLYGCGSN--------TFHQLGITNKVVNGLINLHS-LDHEPFVQVSAGLRHAAAVT-NTGCLQIWGIEKY-------VKQLTDVSG--VVKASCGQRHIVALTTKNKLLAWGGNNHGQCGQNSTTTKHIKEPLSIEWDESNGR------IENVVSGWTHSLVLTDRQQVYSWGRNTYGQLGRASY------DNSFLPK-------RIPELEGITLIAAGSEHSMALDKFGQLWTWGWNEHGSLGNGNTENQ 324          
BLAST of EWM25894.1 vs. NCBI_GenBank
Match: gi|669170365|ref|XP_008620531.1| (hypothetical protein SDRG_16112 [Saprolegnia diclina VS20] >gi|530727804|gb|EQC26046.1| hypothetical protein SDRG_16112 [Saprolegnia diclina VS20])

HSP 1 Score: 138.658 bits (348), Expect = 2.564e-32
Identity = 115/333 (34.53%), Postives = 158/333 (47.45%), Query Frame = 0
Query:  267 LAAGGGHSAIVTGEDRLYLWGWNEAGQVGGSKYATLDGTHRVHVFPRRVAMVALGHAHTLVLEKDTGKL---YGVGGNAAGEATGVVMEQRKQCRAVGGGLVTLDGGSDPIRF-------SWCDAGVRHSAGVTRDDGRLVTWGVGRSG------ACLPASVRGWAPVDGAKVRKVWCGWQHTVV-LDDRGRVWTLGANKYGQLGRRGSQNDGLPELVEWPEGAGREGEGVRVEEVACGWSHVLVKTHDGEIWGWGRNTFGQLGSEAVAEPETIGRDYLPRPLLKDKDRLPHGVQVDKVTCGSESSMLVGKDGSLWVCGWNEHGNLGVGDGKD 582
            L  GG HSA V     LY+WG N   Q+      T     ++ + PR VA+V  G +HT+ +      L   Y  G N   +        +        GLV      +P+RF           +G +HS   T  DGR+ TWG GRSG        L A      P+DGA V  V+CGWQH+V  L  +G V  +G+N++GQLG        + E     E A         + VA GW HVL   HDG ++ WG+ +FGQLG ++V        ++ PR L+ D+       +++ V CGSE S+LV   G L+ CGW EHGNLG GD ++
Sbjct:   43 LTTGGCHSAAVDATGALYMWGSNAHAQLH-LDVPTAQAPVKIAIEPR-VALVRCGWSHTVAVATHADGLSTVYSWGSNQHDQLGQTTTSDK-------AGLV-----QNPLRFLAPVLAVVSVASGWKHSLLAT-SDGRVFTWGYGRSGELGLGPKTLRAPTPTLVPIDGA-VAAVYCGWQHSVFHLTSKGLV-VVGSNRHGQLGLGNESRKQVFEPTPILEAA--SAALFCCDHVAVGWHHVL-GVHDGAVYSWGKGSFGQLGHDSV------NGEHTPRLLVMDE-------RINHVACGSEHSLLVTASGRLYSCGWGEHGNLGHGDTQN 342          

HSP 2 Score: 68.1662 bits (165), Expect = 1.359e-8
Identity = 69/219 (31.51%), Postives = 94/219 (42.92%), Query Frame = 0
Query:  385 HSAGVTRDDGRLVTWGVGRSGACLPASVRGWAPVDGA---KVRKVWCGWQHTVVL----DDRGRVWTLGANKYGQLGRRGSQNDGLPELVEWPEGAGREGEGVRVEEVACGWSHVLVKTHDGEIWGWGRNTFGQLGSEAVAEPETIGRDYLPRPLLKDKDRLPHGVQVDKVTCGSESSMLVGKDGSLWVCGWNEHGNLGVGDGKDRKSWTLVPGLSAGS 596
            HSA V    G L  WG               APV  A   +V  V CGW HTV +    D    V++ G+N++ QLG+  + +     LV+ P         + V  VA GW H L+ T DG ++ WG    G+LG      P+T+     P P L   D       V  V CG + S+       L V G N HG LG+G+   ++ +   P L A S
Sbjct:   49 HSAAVDAT-GALYMWGSNAHAQLHLDVPTAQAPVKIAIEPRVALVRCGWSHTVAVATHADGLSTVYSWGSNQHDQLGQTTTSDKA--GLVQNP--LRFLAPVLAVVSVASGWKHSLLATSDGRVFTWGYGRSGELG----LGPKTL---RAPTPTLVPIDG-----AVAAVYCGWQHSVFHLTSKGLVVVGSNRHGQLGLGNESRKQVFEPTPILEAAS 250          
The following BLAST results are available for this feature:
BLAST of EWM25894.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107763|gb|EWM25894.1|0.000e+0100.00retinitis pigmentosa gtpase regulator [Nannochloro... [more]
gi|1210526152|dbj|GAX15070.1|1.054e-8635.37hypothetical protein FisN_12Lh233 [Fistulifera sol... [more]
gi|1210517402|dbj|GAX23659.1|3.100e-8434.97hypothetical protein FisN_12Hh233 [Fistulifera sol... [more]
gi|219121886|ref|XP_002181288.1|1.139e-7634.05predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|397620438|gb|EJK65722.1|5.452e-6933.44hypothetical protein THAOC_13394 [Thalassiosira oc... [more]
gi|1072230422|gb|OEU15155.1|2.491e-6529.92RCC1/BLIP-II protein [Fragilariopsis cylindrus CCM... [more]
gi|224003935|ref|XP_002291639.1|1.630e-4738.63predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|298709017|emb|CBJ30967.1|5.829e-3449.01ChaC-like protein [Ectocarpus siliculosus][more]
gi|321478150|gb|EFX89108.1|1.010e-3230.05hypothetical protein DAPPUDRAFT_304662 [Daphnia pu... [more]
gi|669170365|ref|XP_008620531.1|2.564e-3234.53hypothetical protein SDRG_16112 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4791rna4791Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications