EWM25917.1, cds4772 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25917.1 vs. NCBI_GenBank
Match: gi|585107786|gb|EWM25917.1| (CS-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 848.195 bits (2190), Expect = 0.000e+0 Identity = 409/409 (100.00%), Postives = 409/409 (100.00%), Query Frame = 0
Query: 1 MARRPLFLVIGCAAFPTLQAFNMAYHPLASSRRGKSYSTAITRLQSQQRGLLGDVVRPYDNSGGETDARLQFSTTRPDWLAELMLAKESQILRFPHELRRFEWTAEDDEAVDEFLMRGKMQDAQAYFEEKKATSVPMYRQTLRYHWTQTETDVHVGVPVPKAVRGANLHLIVAEDAMQVALTDTPSFGVISGKFAGTIDPSTSGWQLVQKPDGSHAISMTLKKQSQPGTHALWYQLLQGEKLGACMLFKGSAGQGRYHWSQDLDYMNVFIPIPEGVRGKSVQMTIDAAGRCMEVSHPQTSENPEVTGKQGDEGGRQRIGGELSGLVSPDECSWVIDEDGQGQRCVCLSLRKRRREASESTWWPRCFKEEESVVPPEMQGSLDEGLAQAREERERMERALGAEDGWGEEE 409
MARRPLFLVIGCAAFPTLQAFNMAYHPLASSRRGKSYSTAITRLQSQQRGLLGDVVRPYDNSGGETDARLQFSTTRPDWLAELMLAKESQILRFPHELRRFEWTAEDDEAVDEFLMRGKMQDAQAYFEEKKATSVPMYRQTLRYHWTQTETDVHVGVPVPKAVRGANLHLIVAEDAMQVALTDTPSFGVISGKFAGTIDPSTSGWQLVQKPDGSHAISMTLKKQSQPGTHALWYQLLQGEKLGACMLFKGSAGQGRYHWSQDLDYMNVFIPIPEGVRGKSVQMTIDAAGRCMEVSHPQTSENPEVTGKQGDEGGRQRIGGELSGLVSPDECSWVIDEDGQGQRCVCLSLRKRRREASESTWWPRCFKEEESVVPPEMQGSLDEGLAQAREERERMERALGAEDGWGEEE
Sbjct: 1 MARRPLFLVIGCAAFPTLQAFNMAYHPLASSRRGKSYSTAITRLQSQQRGLLGDVVRPYDNSGGETDARLQFSTTRPDWLAELMLAKESQILRFPHELRRFEWTAEDDEAVDEFLMRGKMQDAQAYFEEKKATSVPMYRQTLRYHWTQTETDVHVGVPVPKAVRGANLHLIVAEDAMQVALTDTPSFGVISGKFAGTIDPSTSGWQLVQKPDGSHAISMTLKKQSQPGTHALWYQLLQGEKLGACMLFKGSAGQGRYHWSQDLDYMNVFIPIPEGVRGKSVQMTIDAAGRCMEVSHPQTSENPEVTGKQGDEGGRQRIGGELSGLVSPDECSWVIDEDGQGQRCVCLSLRKRRREASESTWWPRCFKEEESVVPPEMQGSLDEGLAQAREERERMERALGAEDGWGEEE 409
BLAST of EWM25917.1 vs. NCBI_GenBank
Match: gi|299472056|emb|CBN80139.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 126.716 bits (317), Expect = 2.552e-30 Identity = 80/255 (31.37%), Postives = 132/255 (51.76%), Query Frame = 0
Query: 84 MLAKESQILRFPHELRRFEWTAEDDEAVDEFLMRGKMQDAQAYFEEK-KATSVPMYRQTLRYHWTQTETDVHVGVPVPKAVRGANLHLIVAEDAMQVALTDTPSFGVISGKFAGTIDPSTSGWQLVQKPDGSHAISMTLKKQSQPGTHALWYQLLQGEKLGACMLFKGSAGQGRYHWSQDLDYMNVFIPIPEGVRGKSVQMTIDAAGRCMEVSHPQTSENPEVTGKQGDEGGRQRIGGELSGLVSPDECSWVIDE 337
M ++ +I P+EL+R E E E + R + +D E + +PM RQ RY WTQTET V +P+ KA R +L+L+V +D MQVA+ SFG I+G F G +D + +++ + + + I + + K + PG + W++LLQGE+ + FKG RY W Q+ + + + IP+P+ V + + +D AG + VS S P+ + + G+ GL+SP + W++ E
Sbjct: 1 MPSQAQRIPEDPNELQRLE--REYYERAKKRNTRKRQEDIDRLTELRHNLRDLPMQRQCHRYRWTQTETTFDVEIPMLKACRDEDLYLVVEKDQMQVAIKTDESFGAITGVFPGDVDARSCSFRIHSRFNEPY-IHLEIVKLTAPGMYEFWHELLQGEEESPTIRFKGET--PRYSWKQNAETIELQIPVPDDVTKRKTTLDLDPAGDRIHVSF---SNRPDF----------EPLEGKFKGLISPLDSVWMLGE 237 The following BLAST results are available for this feature:
BLAST of EWM25917.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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