EWM25904.1, cds4769 (CDS) Nannochloropsis gaditana

Overview
NameEWM25904.1
Unique Namecds4769
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:335201..335665 -
Alignment locationCM002464.1:335044..335115 -
Alignment locationCM002464.1:334785..334968 -
Alignment locationCM002464.1:334439..334656 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25904.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100048g19.10276.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:335201..335665 -
CM002464.1supercontigCM002464.1:335044..335115 -
CM002464.1supercontigCM002464.1:334785..334968 -
CM002464.1supercontigCM002464.1:334439..334656 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM25904.1 vs. NCBI_GenBank
Match: gi|585107773|gb|EWM25904.1| (hypothetical protein Naga_100048g19 [Nannochloropsis gaditana])

HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0 
Query:    1 MPTSSDGTVTQAPSTSNGSTKKRRGGKRKKNTGRPDDNPKHPAPGDPSSVGSGSNRNRICNGNRRLLSYALSPAYWFALTVSMVAFMVLRRGSTRISGFSQVTPGAAGSRDFKAKVSPNTAAEEISLDSSSNTRDEECISTKPNSFFSWSFPKLEAMMTQFIESPIVFPEAPVTRFRRRALQEMQLNDEPLQDNPPRYVPPGYAFPSQVLHSDIHLRAERERHRAVMRAVQPIMLNGREQDCVSPRCLRDGTYPAFRKLERKMLKMLSPESLCVFILDWGRGEIEFEREAYLQARPQMALYPNVTSPQVIEK 312
            MPTSSDGTVTQAPSTSNGSTKKRRGGKRKKNTGRPDDNPKHPAPGDPSSVGSGSNRNRICNGNRRLLSYALSPAYWFALTVSMVAFMVLRRGSTRISGFSQVTPGAAGSRDFKAKVSPNTAAEEISLDSSSNTRDEECISTKPNSFFSWSFPKLEAMMTQFIESPIVFPEAPVTRFRRRALQEMQLNDEPLQDNPPRYVPPGYAFPSQVLHSDIHLRAERERHRAVMRAVQPIMLNGREQDCVSPRCLRDGTYPAFRKLERKMLKMLSPESLCVFILDWGRGEIEFEREAYLQARPQMALYPNVTSPQVIEK
Sbjct:    1 MPTSSDGTVTQAPSTSNGSTKKRRGGKRKKNTGRPDDNPKHPAPGDPSSVGSGSNRNRICNGNRRLLSYALSPAYWFALTVSMVAFMVLRRGSTRISGFSQVTPGAAGSRDFKAKVSPNTAAEEISLDSSSNTRDEECISTKPNSFFSWSFPKLEAMMTQFIESPIVFPEAPVTRFRRRALQEMQLNDEPLQDNPPRYVPPGYAFPSQVLHSDIHLRAERERHRAVMRAVQPIMLNGREQDCVSPRCLRDGTYPAFRKLERKMLKMLSPESLCVFILDWGRGEIEFEREAYLQARPQMALYPNVTSPQVIEK 312
The following BLAST results are available for this feature:
BLAST of EWM25904.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107773|gb|EWM25904.1|0.000e+0100.00hypothetical protein Naga_100048g19 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4781rna4781Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications